FC870835

Overview
NameFC870835
Unique NameFC870835
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length648
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig323 contig Ccv1_Contig323:312..959. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC870835 vs. ExPASy Swiss-Prot
Match: KGUA_PIG (Guanylate kinase OS=Sus scrofa GN=GUK1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.467e-11
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3
Query:    6 IFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 203
            IF+ PPS++ LE+RLR R TETE+ + KRL  AK ++E  K  G+FD I+ ND L++ Y  LK+ L
Sbjct:  120 IFVQPPSLDVLEQRLRQRNTETEESLAKRLAAAKADMESSKEPGLFDLIIINDSLDKAYWALKEAL 185          
BLAST of FC870835 vs. ExPASy Swiss-Prot
Match: KGUA_MOUSE (Guanylate kinase OS=Mus musculus GN=Guk1 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.916e-11
Identity = 31/66 (46.97%), Postives = 46/66 (69.70%), Query Frame = 3
Query:    6 IFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 203
            IF+ PPS++ LE+RLR R TETE+ + KRL  A+ ++E  K  G+FD ++ ND L++ Y  LK+ L
Sbjct:  120 IFVQPPSLDVLEQRLRLRNTETEESLAKRLAAARTDMESSKEPGLFDLVIINDDLDKAYATLKQAL 185          
BLAST of FC870835 vs. ExPASy Swiss-Prot
Match: KGUA_SCHPO (Guanylate kinase OS=Schizosaccharomyces pombe GN=SPBC1198.05 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.502e-11
Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 3
Query:    6 IFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKL 200
            +F+ PPS+E+LE RLR RGTE E  IL+RL  A+ EIE  +  G FD ++ ND +E+ Y+ L+ +
Sbjct:  134 VFLAPPSIEQLEVRLRGRGTENESAILQRLERARAEIEYSEKPGNFDALIVNDDVEKAYKQLEAI 198          
BLAST of FC870835 vs. ExPASy Swiss-Prot
Match: KGUA_BOVIN (Guanylate kinase OS=Bos taurus GN=GUK1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.268e-11
Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = 3
Query:    6 IFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 203
            IF+ PPS++ LE+RLR R TETE+ + KRL  A+ ++E  K  G+FD I+ ND L++ Y  LK+ L
Sbjct:  120 IFVQPPSLDVLEQRLRQRNTETEESLAKRLAAARADMESSKEPGLFDLIIVNDSLDKAYWALKEAL 185          
The following BLAST results are available for this feature:
BLAST of FC870835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
KGUA_PIG1.467e-1150.00Guanylate kinase OS=Sus scrofa GN=GUK1 PE=1 SV=2[more]
KGUA_MOUSE1.916e-1146.97Guanylate kinase OS=Mus musculus GN=Guk1 PE=1 SV=2[more]
KGUA_SCHPO2.502e-1147.69Guanylate kinase OS=Schizosaccharomyces pombe GN=S... [more]
KGUA_BOVIN3.268e-1148.48Guanylate kinase OS=Bos taurus GN=GUK1 PE=1 SV=2[more]
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Properties
Property NameValue
Genbank descriptionKN0AAA2CH04ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA2CH04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870835 ID=FC870835; Name=FC870835; organism=Citrus clementina; type=EST; length=648bp
GGGTCATATTTATCTGTCCACCTTCAATGGAGGAGCTTGAGGAGCGCCTC
CGTGCAAGAGGAACTGAGACAGAGGATCAGATCCTAAAACGACTCAGAAA
TGCCAAGGAAGAGATTGAGCAAGGGAAATCCTCCGGCATCTTTGATCATA
TATTGTACAATGATAAACTTGAAGAGTGTTACGAGAACCTTAAGAAACTC
TTGGGACTTGATGGGAGTATTGCTGCAACCCATCAAACCTCACCCAAAGG
GATTGATTTGCCAGCTGATCATTCAGTATCAAAAGCTGATAACAAAGTCA
TCATAAAGTGTGGGGCTGCTGAAGGAAAAACATCAAAGAACTTAATGGTT
TTGGATGTATCCTCACTGAAAGGCGGAGCACCTGGACGGACTAGAGGGCT
TCAAGTTTATACAGTTGATTCATTTTCAGATGGTTTAAATGGGGTCAATA
AGTTGAGCTAATAGCTCCCATCCTCATCGACGCTAACGTGGTTTCTCATT
TAAAATATTTCTCAAAGCTCAACTTATATAATTTAGAAAAAAAAAGAGCC
TTGATGAAGCTCTACCTGTGATTTCGTAAGACTACGACATTCAATTTTTT
TCAATTTTTTCACCTCCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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