FC870878

Overview
NameFC870878
Unique NameFC870878
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length796
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9723 contig Ccv1_Contig9723:1..796. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC870878 vs. ExPASy Swiss-Prot
Match: MIOX1_ARATH (Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1)

HSP 1 Score: 359.762 bits (922), Expect = 1.021e-98
Identity = 167/215 (77.67%), Postives = 184/215 (85.58%), Query Frame = 2
Query:  182 DSNDNELEQLQDGGE----------GFTVPETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYNNPAFNTKYGAYSEGRGLDDVLMSWGHDDYMYLV 796
            D+ D  +E+ Q  G+          GF  P TNSFG+TFRDY  ESER++GVEEFYR  HI QT DFV++MREEY KLNR EMSIWECCELLNEF+DESDPDLDEPQIEHLLQTAEAIRKDYP+EDWLHLTGLIHDLGKVLLH  FGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDY+NP++N+KYG Y+EG GLD+VLMSWGHDDYMYLV
Sbjct:   13 DAGDEIVEKNQGNGKEEETELVLDAGFEAPHTNSFGRTFRDYDAESERRRGVEEFYRVNHIGQTVDFVRKMREEYEKLNRTEMSIWECCELLNEFIDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLLHSSFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYDNPSYNSKYGIYTEGCGLDNVLMSWGHDDYMYLV 227          
BLAST of FC870878 vs. ExPASy Swiss-Prot
Match: MIOX_ORYSJ (Probable inositol oxygenase OS=Oryza sativa subsp. japonica GN=Os06g0561000 PE=2 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 4.153e-92
Identity = 156/202 (77.23%), Postives = 175/202 (86.63%), Query Frame = 2
Query:  191 DNELEQLQDGGEGFTVPETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYNNPAFNTKYGAYSEGRGLDDVLMSWGHDDYMYLV 796
            DN  E + DGG  F VP++N+FG  FR+Y  ESER++ VEEFYR  HINQT DFV+RMREEYG++++ EM IWEC ELLNEF+D+SDPDLD PQIEHLLQTAEAIRKD+P+EDWLHLTGLIHDLGKVLLHP FGELPQW+VVGDTFPVGCAFDE  VH KYFKENPDY NP  NTK+GAYSEG GLD+VLMSWGHDDYMYLV
Sbjct:   25 DNAAELVLDGG--FVVPDSNAFGNAFRNYEAESERKETVEEFYRVNHINQTYDFVRRMREEYGRVDKTEMGIWECIELLNEFIDDSDPDLDMPQIEHLLQTAEAIRKDFPDEDWLHLTGLIHDLGKVLLHPSFGELPQWSVVGDTFPVGCAFDECNVHFKYFKENPDYLNPKLNTKFGAYSEGCGLDNVLMSWGHDDYMYLV 224          
BLAST of FC870878 vs. ExPASy Swiss-Prot
Match: MIOX4_ARATH (Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MIOX4 PE=2 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 3.516e-91
Identity = 160/224 (71.43%), Postives = 178/224 (79.46%), Query Frame = 2
Query:  158 WHRMAVLADSNDNELEQLQDGG-----------EGFTVPETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYNNPAFNTKYGAYSEGRGLDDVLMSWGHDDYMYLV 796
            +  ++    S DN  E   DGG           E F  PE N+FG+ FRDY VESERQKGVEEFYR QHINQT DFVK+MR EYGKL+++ MSIWECCELLNE VDESDPDLDEPQI+HLLQ+AEAIRKDYPNEDWLHLT LIHDLGKV+  P FG LPQWAVVGDTFPVGCAFDES VHHKYF ENPD++N  +NTK G YSEG GL++V+MSWGHDDYMYLV
Sbjct:   10 FEEVSAFEKSGDNIGELKLDGGFSMPKMDTNDDEAFLAPEMNAFGRQFRDYDVESERQKGVEEFYRLQHINQTVDFVKKMRAEYGKLDKMVMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVITLPQFGGLPQWAVVGDTFPVGCAFDESNVHHKYFVENPDFHNETYNTKNGIYSEGCGLNNVMMSWGHDDYMYLV 233          
BLAST of FC870878 vs. ExPASy Swiss-Prot
Match: MIOX2_ARATH (Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2)

HSP 1 Score: 321.242 bits (822), Expect = 4.023e-87
Identity = 154/215 (71.63%), Postives = 174/215 (80.93%), Query Frame = 2
Query:  182 DSNDNELEQLQDGG---------EGFTVPETNSFGQTFRDY-GVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYNNPAFNTKYGAYSEGRGLDDVLMSWGHDDYMYLV 796
            +  DNEL  + DGG         + F  P+ N  G +FRDY   ESERQ+GVEEFYR QHI+QT DFVK+MR+EYGKLN++EMSIWECCELLN  VDESDPDLDEPQI+HLLQTAEAIR+DYP+EDWLHLT LIHDLGKVLL P+FG LPQWAVVGDTFPVGC FD + +HHKYFK N D NNP +NTK G Y+EG GLD+VLMSWGHDDYMYLV
Sbjct:   21 EERDNEL--VLDGGFVVPKSKETDAFDAPDMNFLGHSFRDYENGESERQQGVEEFYRMQHIHQTYDFVKKMRKEYGKLNKMEMSIWECCELLNNVVDESDPDLDEPQIQHLLQTAEAIRRDYPDEDWLHLTALIHDLGKVLLLPEFGGLPQWAVVGDTFPVGCTFDSANIHHKYFKGNHDINNPKYNTKNGVYTEGCGLDNVLMSWGHDDYMYLV 233          
BLAST of FC870878 vs. ExPASy Swiss-Prot
Match: MIOX5_ARATH (Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 1.170e-86
Identity = 149/204 (73.04%), Postives = 167/204 (81.86%), Query Frame = 2
Query:  188 NDNELEQLQDGGEGFTVPETNSFGQTFRDY-GVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYNNPAFNTKYGAYSEGRGLDDVLMSWGHDDYMYLV 796
            +D  + ++    E F  PE N+FG+ FRDY    SERQK VE FY TQH NQT DFV++MR EYGKL+++ M+IWECCEL  E VDESDPDLDEPQI+HLLQ+AEAIRKDYPNEDWLHLT LIHDLGKVL  P FG LPQWAVVGDTFPVGCAFDES VHHKYF ENPD+NNP +NTK G YSEG GL++VLMSWGHDDYMYLV
Sbjct:   27 SDIPMSKISSDDEVFLAPEMNAFGRQFRDYTDTNSERQKSVEHFYATQHTNQTLDFVQKMRSEYGKLDKMVMNIWECCELSKEVVDESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVLTLPQFGGLPQWAVVGDTFPVGCAFDESNVHHKYFMENPDFNNPKYNTKAGIYSEGCGLENVLMSWGHDDYMYLV 230          
BLAST of FC870878 vs. ExPASy Swiss-Prot
Match: MIOX_DICDI (Inositol oxygenase OS=Dictyostelium discoideum GN=miox PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.886e-52
Identity = 98/182 (53.85%), Postives = 126/182 (69.23%), Query Frame = 2
Query:  260 QTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNR-VEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNE--DWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYNNPAFNTKYGAYSEGRGLDDVLMSWGHDDYMYLV 796
            + FR+Y    +R   V E YR  H  QT D+    +++Y +L+  ++M +WE  ELLN  +DESDPD + PQI H LQTAEAIRK YP+   DW HLTG IHDLGKVLL   F E PQWA VGDTFP+GC FDES + +++FK NPDYN+  +N++ G Y +  GL++V MSWGHD+Y YLV
Sbjct:   30 EEFRNYENSEDR---VSEAYRNSHTYQTYDYATEKKKQYSQLDTSIKMGLWEAAELLNTIIDESDPDSNIPQINHCLQTAEAIRKVYPDSKYDWFHLTGFIHDLGKVLLSKKFKEQPQWATVGDTFPLGCKFDESNIFYEFFKMNPDYNDSKYNSECGIYKKNIGLENVTMSWGHDEYFYLV 208          
BLAST of FC870878 vs. ExPASy Swiss-Prot
Match: MIOX_HUMAN (Inositol oxygenase OS=Homo sapiens GN=MIOX PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.311e-42
Identity = 91/187 (48.66%), Postives = 117/187 (62.57%), Query Frame = 2
Query:  239 PETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYNNPAFNTKYGAYSEGRGLDDVLMSWGHDDYMYLV 796
            PE      +FR+Y         V   Y+  H +QT DFV+    ++G  +  +M++ E  +LL+  VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGKVL    FGE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GLD VLMSWGHD+YMY V
Sbjct:   19 PEVAKDKASFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL--FGE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLDRVLMSWGHDEYMYQV 201          
BLAST of FC870878 vs. ExPASy Swiss-Prot
Match: MIOX_PONAB (Inositol oxygenase OS=Pongo abelii GN=MIOX PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.018e-42
Identity = 91/187 (48.66%), Postives = 117/187 (62.57%), Query Frame = 2
Query:  239 PETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYNNPAFNTKYGAYSEGRGLDDVLMSWGHDDYMYLV 796
            PE      +FR+Y         V   Y+  H +QT DFV+    ++G  +  +M++ E  +LL+  VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGKVL    FGE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GLD VLMSWGHD+YMY V
Sbjct:   19 PEMAKDKASFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL--FGE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLDRVLMSWGHDEYMYQV 201          
BLAST of FC870878 vs. ExPASy Swiss-Prot
Match: MIOX_MOUSE (Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 3.018e-42
Identity = 88/185 (47.57%), Postives = 118/185 (63.78%), Query Frame = 2
Query:  239 PETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYNNPAFNTKYGAYSEGRGLDDVLMSWGHDDYMY 790
            PE      +FR+Y         V   Y+  H +QT DFV R R +YG  +  +M+I E   +L++ VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGK++    +GE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GL++VLMSWGHD+Y+Y
Sbjct:   19 PEMAKSKDSFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVSRKRIQYGSFSYKKMTIMEAVGMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKIMAL--WGE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLENVLMSWGHDEYLY 199          
BLAST of FC870878 vs. ExPASy Swiss-Prot
Match: MIOX_RAT (Inositol oxygenase OS=Rattus norvegicus GN=Miox PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 5.148e-42
Identity = 87/185 (47.03%), Postives = 119/185 (64.32%), Query Frame = 2
Query:  239 PETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYNNPAFNTKYGAYSEGRGLDDVLMSWGHDDYMY 790
            PE      +FR+Y         V   Y+  H +QT DFV R R ++G  +  +M++ E  ++L++ VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGK+L    +GE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GL++VLMSWGHD+Y+Y
Sbjct:   19 PEMAKSKGSFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVMRKRIQFGSFSYKKMTVMEAVDMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKILAL--WGE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLENVLMSWGHDEYLY 199          
The following BLAST results are available for this feature:
BLAST of FC870878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
MIOX1_ARATH1.021e-9877.67Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MI... [more]
MIOX_ORYSJ4.153e-9277.23Probable inositol oxygenase OS=Oryza sativa subsp.... [more]
MIOX4_ARATH3.516e-9171.43Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MI... [more]
MIOX2_ARATH4.023e-8771.63Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MI... [more]
MIOX5_ARATH1.170e-8673.04Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MI... [more]
MIOX_DICDI1.886e-5253.85Inositol oxygenase OS=Dictyostelium discoideum GN=... [more]
MIOX_HUMAN2.311e-4248.66Inositol oxygenase OS=Homo sapiens GN=MIOX PE=1 SV... [more]
MIOX_PONAB3.018e-4248.66Inositol oxygenase OS=Pongo abelii GN=MIOX PE=2 SV... [more]
MIOX_MOUSE3.018e-4247.57Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV... [more]
MIOX_RAT5.148e-4247.03Inositol oxygenase OS=Rattus norvegicus GN=Miox PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAA2DA12ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA2DA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870878 ID=FC870878; Name=FC870878; organism=Citrus clementina; type=EST; length=796bp
GGGGGAGTCCTTGGCAAGAAAAATTTACGTGCTGAGGGCTTGAATCCTCA
GAATTCTCAGGGAAGGACTTTTCCGGCTGCCTATAAATAGATAAATCACT
CAACGCCAAGAAAATGCAACAACAAGAAGGAGAAGGAGAATCACCAGGCT
CTGCAATTGGCACAGGATGGCTGTTCTCGCTGATTCAAATGACAACGAAT
TGGAGCAGCTGCAGGATGGAGGAGAAGGATTCACGGTGCCTGAGACTAAT
TCGTTTGGTCAAACTTTCAGGGATTATGGTGTTGAAAGTGAGCGGCAAAA
GGGCGTGGAGGAATTCTATAGAACTCAACATATTAATCAGACCTGTGACT
TTGTGAAAAGGATGAGAGAAGAGTATGGAAAACTGAATAGGGTGGAAATG
AGTATATGGGAATGCTGTGAGCTACTAAATGAATTTGTTGATGAGAGTGA
TCCCGACCTTGATGAGCCTCAAATTGAGCACTTGCTGCAGACAGCCGAGG
CCATTAGGAAGGACTATCCTAATGAGGATTGGCTACATTTGACCGGTCTC
ATCCATGATCTTGGAAAGGTTCTTCTTCATCCTGATTTTGGGGAACTTCC
TCAGTGGGCTGTTGTTGGTGACACATTCCCCGTTGGTTGTGCCTTTGATG
AATCAATTGTTCACCACAAGTATTTTAAGGAGAATCCAGACTACAACAAT
CCTGCTTTTAACACCAAATATGGAGCTTATTCAGAAGGCCGTGGATTAGA
CGATGTGTTGATGTCATGGGGCCATGATGACTACATGTACTTGGTA
back to top