FC870922
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC870922 vs. ExPASy Swiss-Prot
Match: PSB5_SPIOL (Proteasome subunit beta type-5 OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.502e-35 Identity = 68/97 (70.10%), Postives = 79/97 (81.44%), Query Frame = 2 Query: 5 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHNHYYPVTPSTVEQEMAEVAGA 295 LKG RFSVGSGSPYAYGVLD+GYK+DM++ IYHAT+RD ASGGV SVY+VGP+GWKK++GDDVG+LH YYPV P+TVEQEM EV GA Sbjct: 176 LKGMRFSVGSGSPYAYGVLDNGYKYDMTVEEASELARRAIYHATYRDGASGGVVSVYHVGPDGWKKVTGDDVGDLHFQYYPVVPATVEQEMVEVVGA 272
BLAST of FC870922 vs. ExPASy Swiss-Prot
Match: PSB5A_ARATH (Proteasome subunit beta type-5-A OS=Arabidopsis thaliana GN=PBE1 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.563e-35 Identity = 70/93 (75.27%), Postives = 74/93 (79.57%), Query Frame = 2 Query: 5 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHNHYYPVTPSTVEQEMAE 283 LKG RFSVGSGSPYAYGVLDSGYK+DMS+ IYHATFRD ASGGVASVY+VGP GW KLSGDDVGELH HYYPV P+T EQ M E Sbjct: 178 LKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPEGWTKLSGDDVGELHYHYYPVAPATAEQVMEE 270
BLAST of FC870922 vs. ExPASy Swiss-Prot
Match: PSB5B_ARATH (Proteasome subunit beta type-5-B OS=Arabidopsis thaliana GN=PBE2 PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.347e-35 Identity = 71/95 (74.74%), Postives = 73/95 (76.84%), Query Frame = 2 Query: 5 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHNHYYPVTPSTVEQEMAEVA 289 LKG RFSVGSGSPYAYGVLDSGYKFDMS+ IYHATFRD ASGGVASVY+VGP GW KLSGDDVGELH HYYPV P T E M E A Sbjct: 178 LKGDRFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPQGWTKLSGDDVGELHYHYYPVAPITAEHVMEEAA 272
BLAST of FC870922 vs. ExPASy Swiss-Prot
Match: PSB5_DICDI (Proteasome subunit beta type-5 OS=Dictyostelium discoideum GN=psmB5 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.392e-19 Identity = 44/84 (52.38%), Postives = 56/84 (66.67%), Query Frame = 2 Query: 5 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHNHYYPVTP 256 L G RFS GSGS YAYGVLD+G+K+DM+ +YHAT RDA SGG +VY+V +GWKK+S DD +L+ YY + P Sbjct: 183 LHGQRFSCGSGSTYAYGVLDTGFKWDMNDEEAYELGRRAVYHATHRDAYSGGAINVYHVQKDGWKKISSDDCFKLYQKYYNIVP 266
BLAST of FC870922 vs. ExPASy Swiss-Prot
Match: PSB5_MOUSE (Proteasome subunit beta type-5 OS=Mus musculus GN=Psmb5 PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 4.110e-17 Identity = 39/83 (46.99%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 5 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHNHYYPVT 253 + GT FSVGSGS YAYGV+D GY +D+ + IY AT+RDA SGG ++Y+V +GW ++S D+V +LH+ Y V+ Sbjct: 180 ISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKYSSVS 262
BLAST of FC870922 vs. ExPASy Swiss-Prot
Match: PSB5_PONAB (Proteasome subunit beta type-5 OS=Pongo abelii GN=PSMB5 PE=2 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 7.011e-17 Identity = 39/84 (46.43%), Postives = 53/84 (63.10%), Query Frame = 2 Query: 5 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHNHYYPVTP 256 + G FSVGSGS YAYGV+D GY +D+ + IY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y TP Sbjct: 180 ISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSGSTP 263
BLAST of FC870922 vs. ExPASy Swiss-Prot
Match: PSB5_HUMAN (Proteasome subunit beta type-5 OS=Homo sapiens GN=PSMB5 PE=1 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 7.011e-17 Identity = 39/84 (46.43%), Postives = 53/84 (63.10%), Query Frame = 2 Query: 5 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHNHYYPVTP 256 + G FSVGSGS YAYGV+D GY +D+ + IY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y TP Sbjct: 180 ISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSGSTP 263
BLAST of FC870922 vs. ExPASy Swiss-Prot
Match: PSB5_RAT (Proteasome subunit beta type-5 OS=Rattus norvegicus GN=Psmb5 PE=1 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 1.562e-16 Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 2 Query: 5 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHNHYYPVTP 256 + GT FSVGSGS YA+GV+D GY +D+ + IY AT+RDA SGG ++Y+V +GW ++S D+V +LH+ Y P Sbjct: 180 ISGTAFSVGSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKYTSSIP 263
BLAST of FC870922 vs. ExPASy Swiss-Prot
Match: PSB5_BOVIN (Proteasome subunit beta type-5 OS=Bos taurus GN=PSMB5 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.040e-16 Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 5 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHNHY 241 + G FSVGSGS YAYGV+D GY +D+ + IY AT+RDA SGG S+Y+V +GW ++S D+V +LH+ Y Sbjct: 180 ISGATFSVGSGSVYAYGVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGSVSLYHVREDGWIRVSSDNVADLHDKY 258
BLAST of FC870922 vs. ExPASy Swiss-Prot
Match: PSB5_CHICK (Proteasome subunit beta type-5 (Fragment) OS=Gallus gallus GN=PSMB5 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 1.909e-14 Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 2 Query: 5 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHNHY 241 + G F+VGSGS YAYGVLD G + DM+ I+ A RDA SGG +VY+VGP GW+++S DV LH+ Y Sbjct: 176 IPGEAFAVGSGSSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDAYSGGSVTVYHVGPRGWRRVSSHDVAGLHDGY 254 The following BLAST results are available for this feature:
BLAST of FC870922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC870922 ID=FC870922; Name=FC870922; organism=Citrus clementina; type=EST; length=578bpback to top |