FC870938
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC870938 vs. ExPASy Swiss-Prot
Match: CNX1_ARATH (Molybdopterin biosynthesis protein CNX1 OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=2) HSP 1 Score: 281.567 bits (719), Expect = 4.221e-75 Identity = 137/173 (79.19%), Postives = 157/173 (90.75%), Query Frame = 1 Query: 4 SSEKLGGAKVVATDVVPDDVGKIKEVLRRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMHESLKVTPFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKREKHPRHVPHSQA-VPVDTWEHSYKMSSGGG---TEPSCSCSH 510 SSEKLGGAKVVAT VVPD+V +IK++L++WSD+D+MDLILTLGGTGFTPRDVTPEATK++IERETPGLL+VMM ESLK+TPFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKREKHP+H+PH++A +P DTW+ SYK + G E CSC+H Sbjct: 498 SSEKLGGAKVVATAVVPDEVERIKDILQKWSDVDEMDLILTLGGTGFTPRDVTPEATKKVIERETPGLLFVMMQESLKITPFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKREKHPKHIPHAEATLPTDTWDQSYKSAYETGEKKEEAGCSCTH 670
BLAST of FC870938 vs. ExPASy Swiss-Prot
Match: GEPH_MOUSE (Gephyrin OS=Mus musculus GN=Gphn PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 9.844e-32 Identity = 66/121 (54.55%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 22 GAKVVATDVVPDDVGKIKEVLRRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMHESLKVTPFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIK 384 G + A +VPD++ +IKE L W D +++LILT GGTGF PRDVTPEATKE+IERE PG+ M+ SL VTP MLSR GIRG TLIIN+PG+ EC + +LPAL HA+ ++ Sbjct: 50 GGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLR 170
BLAST of FC870938 vs. ExPASy Swiss-Prot
Match: GEPH_HUMAN (Gephyrin OS=Homo sapiens GN=GPHN PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 9.844e-32 Identity = 66/121 (54.55%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 22 GAKVVATDVVPDDVGKIKEVLRRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMHESLKVTPFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIK 384 G + A +VPD++ +IKE L W D +++LILT GGTGF PRDVTPEATKE+IERE PG+ M+ SL VTP MLSR GIRG TLIIN+PG+ EC + +LPAL HA+ ++ Sbjct: 50 GGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLR 170
BLAST of FC870938 vs. ExPASy Swiss-Prot
Match: GEPH_CHICK (Gephyrin OS=Gallus gallus GN=GPHN PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 9.844e-32 Identity = 66/121 (54.55%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 22 GAKVVATDVVPDDVGKIKEVLRRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMHESLKVTPFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIK 384 G + A +VPD++ +IKE L W D +++LILT GGTGF PRDVTPEATKE+IERE PG+ M+ SL VTP MLSR GIRG TLIIN+PG+ EC + +LPAL HA+ ++ Sbjct: 50 GGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLR 170
BLAST of FC870938 vs. ExPASy Swiss-Prot
Match: GEPH_RAT (Gephyrin OS=Rattus norvegicus GN=Gphn PE=1 SV=3) HSP 1 Score: 128.257 bits (321), Expect = 5.972e-29 Identity = 66/134 (49.25%), Postives = 84/134 (62.69%), Query Frame = 1 Query: 22 GAKVVATDVVPDDVGKIKEVLRRWSDIDKMDLILTLGGTGFTPRDVTPE-------------ATKELIERETPGLLYVMMHESLKVTPFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIK 384 G + A +VPD++ +IKE L W D +++LILT GGTGF PRDVTPE ATKE+IERE PG+ M+ SL VTP MLSR GIRG TLIIN+PG+ EC + +LPAL HA+ ++ Sbjct: 50 GGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEKFPTFPFCGLQKGATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLR 183
BLAST of FC870938 vs. ExPASy Swiss-Prot
Match: CIN_DROME (Molybdenum cofactor synthesis protein cinnamon OS=Drosophila melanogaster GN=cin PE=1 SV=3) HSP 1 Score: 116.701 bits (291), Expect = 1.798e-25 Identity = 57/119 (47.90%), Postives = 81/119 (68.07%), Query Frame = 1 Query: 34 VATDVVPDDVGKIKEVLRRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMHESLKVTPFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGD 390 V ++VPD+ I++ LR+W D +++ +ILT GGTGF PRDVTPEAT++L+E+E P L + ES+K T +A LSR GI G+TLI+N+PG+ AV EC + + L HA+ I D Sbjct: 41 VIGNIVPDEKDIIQQELRKWIDREELRVILTTGGTGFAPRDVTPEATRQLLEKECPQLSMYITLESIKQTQYAALSRGLCGIAGNTLILNLPGSEKAVKECFQTISALLPHAVHLIGDD 159
BLAST of FC870938 vs. ExPASy Swiss-Prot
Match: GEPH_DICDI (Gephyrin OS=Dictyostelium discoideum GN=gphn PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.348e-25 Identity = 59/121 (48.76%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 46 VVPDDVGKIKEVLRRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMHESLKVTPFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKREKHP 408 VVPD++ I++++ +W+ + K LILT GGTGFTPRDVTPEA K L+ R T G+ M+ SL +TP AMLSR AGIR TLII +PG+ A+ E + +LPA+ HA+ I + P Sbjct: 82 VVPDEIEHIQQMITQWTHL-KYKLILTTGGTGFTPRDVTPEAIKPLLNRRTKGIEIAMLKTSLDITPHAMLSRPIAGIRDQTLIITLPGSVKAIRENLGVVLPAIPHAIGLINSKPKSSLP 201
BLAST of FC870938 vs. ExPASy Swiss-Prot
Match: MOG_HELPJ (Molybdopterin biosynthesis mog protein OS=Helicobacter pylori J99 GN=mog PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.509e-21 Identity = 50/125 (40.00%), Postives = 82/125 (65.60%), Query Frame = 1 Query: 43 DVVPDDVGKIKEVLRRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMHESLKVTPFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKREKHPRHV 417 ++V D+ I++ L + D + DL++T GGTG RD+TPEATK++ ++ PG +M SLK P A+LSR +AGIR +LIIN+PG P ++ EC+EA+ PA+ + + I G+ + + +++ Sbjct: 45 EIVADERDLIEKSLIKMCDEYQCDLVVTTGGTGPALRDITPEATKKVCQKMLPGFGELMRMTSLKYVPTAILSRQSAGIRNKSLIINLPGKPKSIRECLEAVFPAIPYCVDLILGNYMQVNEKNI 169
BLAST of FC870938 vs. ExPASy Swiss-Prot
Match: MOG_HELPY (Molybdopterin biosynthesis mog protein OS=Helicobacter pylori GN=mog PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.021e-20 Identity = 49/125 (39.20%), Postives = 82/125 (65.60%), Query Frame = 1 Query: 43 DVVPDDVGKIKEVLRRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMHESLKVTPFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKREKHPRHV 417 ++V D+ I++ L + D + DL++T GGTG RD+TPEAT+++ ++ PG +M SLK P A+LSR +AGIR +LIIN+PG P ++ EC+EA+ PA+ + + I G+ + + +++ Sbjct: 45 EIVADERDLIEKSLIKMCDEYQCDLVVTTGGTGPALRDITPEATEKVCQKMLPGFGELMRMTSLKYVPTAILSRQSAGIRNKSLIINLPGKPKSIRECLEAVFPAIPYCVDLILGNYMQVNEKNI 169
BLAST of FC870938 vs. ExPASy Swiss-Prot
Match: MOG_HAEIN (Molybdopterin biosynthesis mog protein OS=Haemophilus influenzae GN=mog PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.410e-15 Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 40 TDVVPDDVGKIKEVLRRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMHESLKVTPFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEAL 348 T ++PD+ I++ L+ D L+LT GGTG RDVTP+AT + +RE PG M SL P A+LSR IR +LI+N+PG P A+ E +E + Sbjct: 45 TRLIPDEQPVIEQTLKELVDEQGCHLVLTTGGTGPAKRDVTPDATLAVADREMPGFGEQMRQVSLHFVPTAILSRQVGVIRKESLILNLPGQPKAIKETLEGV 147 The following BLAST results are available for this feature:
BLAST of FC870938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >FC870938 ID=FC870938; Name=FC870938; organism=Citrus clementina; type=EST; length=890bpback to top |