FC871032
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871032 vs. ExPASy Swiss-Prot
Match: RS132_ARATH (40S ribosomal protein S13-2 OS=Arabidopsis thaliana GN=RPS13B PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 3.637e-43 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 Query: 4 SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 264 SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA Sbjct: 65 SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
BLAST of FC871032 vs. ExPASy Swiss-Prot
Match: RS131_ARATH (40S ribosomal protein S13-1 OS=Arabidopsis thaliana GN=RPS13A PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 3.637e-43 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 Query: 4 SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 264 SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA Sbjct: 65 SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
BLAST of FC871032 vs. ExPASy Swiss-Prot
Match: RS13_SOYBN (40S ribosomal protein S13 OS=Glycine max GN=RPS13 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 8.103e-43 Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 1 Query: 4 SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 264 SVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA Sbjct: 65 SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
BLAST of FC871032 vs. ExPASy Swiss-Prot
Match: RS13_PEA (40S ribosomal protein S13 OS=Pisum sativum GN=RPS13 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 8.959e-42 Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 1 Query: 4 SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 264 SVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLER RKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA Sbjct: 65 SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERFRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
BLAST of FC871032 vs. ExPASy Swiss-Prot
Match: RS13_MAIZE (40S ribosomal protein S13 OS=Zea mays GN=RPS13 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 2.607e-41 Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 1 Query: 4 SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 264 SVTGSKILRILKAHGLAPEIPEDLY LIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPP WKYESTTASTLVA Sbjct: 65 SVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYESTTASTLVA 151
BLAST of FC871032 vs. ExPASy Swiss-Prot
Match: RS132_ORYSJ (40S ribosomal protein S13-2 OS=Oryza sativa subsp. japonica GN=Os08g0117300 PE=1 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 2.607e-41 Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 1 Query: 4 SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 264 SVTGSKILRILKAHGLAPEIPEDLY LIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPP WKYESTTASTLVA Sbjct: 65 SVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYESTTASTLVA 151
BLAST of FC871032 vs. ExPASy Swiss-Prot
Match: RS131_ORYSJ (40S ribosomal protein S13-1 OS=Oryza sativa subsp. japonica GN=Os08g0117200 PE=2 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 2.607e-41 Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 1 Query: 4 SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 264 SVTGSKILRILKAHGLAPEIPEDLY LIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPP WKYESTTASTLVA Sbjct: 65 SVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYESTTASTLVA 151
BLAST of FC871032 vs. ExPASy Swiss-Prot
Match: RS13_LUMRU (40S ribosomal protein S13 OS=Lumbricus rubellus GN=RPS13 PE=2 SV=3) HSP 1 Score: 149.058 bits (375), Expect = 1.253e-35 Identity = 76/86 (88.37%), Postives = 77/86 (89.53%), Query Frame = 1 Query: 7 VTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 264 V G+KILRILKA GLAP IPEDLY LIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYK K LPPVWKYES TAS LVA Sbjct: 66 VAGNKILRILKAKGLAPTIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKTRKVLPPVWKYESATASALVA 151
BLAST of FC871032 vs. ExPASy Swiss-Prot
Match: RS13_XENLA (40S ribosomal protein S13 OS=Xenopus laevis GN=rps13 PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.137e-35 Identity = 71/86 (82.56%), Postives = 80/86 (93.02%), Query Frame = 1 Query: 7 VTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 264 VTG+KILRILK+ GLAP++PEDLYHLIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYK + LPP WKYES+TAS LVA Sbjct: 66 VTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTRRVLPPNWKYESSTASALVA 151
BLAST of FC871032 vs. ExPASy Swiss-Prot
Match: RS13_SCHPO (40S ribosomal protein S13 OS=Schizosaccharomyces pombe GN=rps13 PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.137e-35 Identity = 70/86 (81.40%), Postives = 79/86 (91.86%), Query Frame = 1 Query: 7 VTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 264 +TG KI+RILKA+GLAPE+PEDLY+LIKKAV++RKHLERNRKDKDSKFRLIL+ESRIHRLARYY+K LPP WKYES TAS LVA Sbjct: 66 ITGQKIMRILKANGLAPELPEDLYNLIKKAVSVRKHLERNRKDKDSKFRLILIESRIHRLARYYRKVGALPPTWKYESATASALVA 151 The following BLAST results are available for this feature:
BLAST of FC871032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871032 ID=FC871032; Name=FC871032; organism=Citrus clementina; type=EST; length=529bpback to top |