FC871062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871062 vs. ExPASy Swiss-Prot
Match: IF5_MAIZE (Eukaryotic translation initiation factor 5 OS=Zea mays GN=EIF5 PE=2 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 3.301e-76 Identity = 138/151 (91.39%), Postives = 143/151 (94.70%), Query Frame = 2 Query: 356 MALLNIGADNRGDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPESKK 808 MAL NIGA NR DAFYRYKMP+MITKIEGRGNGIKTN+VNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTG SLVNG+HDTAKLAGLLE FIKKYVQCYGCGNPETEI+I+KTQMI LKCAACGFVSDVDMRDKL TFILKNPPE KK Sbjct: 1 MALQNIGASNRDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGISLVNGAHDTAKLAGLLEVFIKKYVQCYGCGNPETEILISKTQMISLKCAACGFVSDVDMRDKLTTFILKNPPEQKK 151
BLAST of FC871062 vs. ExPASy Swiss-Prot
Match: IF5Y_ARATH (Probable eukaryotic translation initiation factor 5-1 OS=Arabidopsis thaliana GN=At1g36730 PE=2 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 1.638e-75 Identity = 133/152 (87.50%), Postives = 145/152 (95.39%), Query Frame = 2 Query: 356 MALLNIGADNRGDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPESKKA 811 MAL NIGA NR DAFYRYKMP+M+TKIEGRGNGIKTN+VNMV+IAKAL RPA+YTTKYFGCELGAQSKFDEK GTSLVNG+HDT+KLAGLLENFIKKYVQCYGCGNPETEI+ITKTQM+QLKCAACGF+SDVDMRDKL +FILKNPPE KK+ Sbjct: 1 MALQNIGASNRDDAFYRYKMPRMMTKIEGRGNGIKTNVVNMVEIAKALGRPAAYTTKYFGCELGAQSKFDEKNGTSLVNGAHDTSKLAGLLENFIKKYVQCYGCGNPETEILITKTQMLQLKCAACGFLSDVDMRDKLTSFILKNPPEQKKS 152
BLAST of FC871062 vs. ExPASy Swiss-Prot
Match: IF5_PHAVU (Eukaryotic translation initiation factor 5 OS=Phaseolus vulgaris GN=EIF5 PE=2 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 5.271e-74 Identity = 134/151 (88.74%), Postives = 141/151 (93.38%), Query Frame = 2 Query: 356 MALLNIGADNRGDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPESKK 808 MAL NIGA N DAFYRYKMP+M+TKIEGRGNGIKTN+VNMVDIAK LARPASYTTKYFGCELGAQSKFDEKTGTS VNG+H+TAKLAGLLE FIKKYVQCYGCGNPETEI+ITK QMIQLKCAACGFVSDVDMRDKL TFI+KNPPE KK Sbjct: 1 MALQNIGAGNSDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVDIAKRLARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHETAKLAGLLEIFIKKYVQCYGCGNPETEILITKNQMIQLKCAACGFVSDVDMRDKLTTFIVKNPPEVKK 151
BLAST of FC871062 vs. ExPASy Swiss-Prot
Match: IF5Z_ARATH (Probable eukaryotic translation initiation factor 5-2 OS=Arabidopsis thaliana GN=At1g77840 PE=2 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.533e-73 Identity = 130/151 (86.09%), Postives = 141/151 (93.38%), Query Frame = 2 Query: 356 MALLNIGADNRGDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPESKK 808 MAL NIGA NR DAFYRYKMPKM+TK EG+GNGIKTNI+N V+IAKALARP SYTTKYFGCELGAQSKFDEKTGTSLVNG+H+T+KLAGLLENFIKK+VQCYGCGNPETEIIITKTQM+ LKCAACGF+S+VDMRDKL FILKNPPE KK Sbjct: 1 MALQNIGASNRNDAFYRYKMPKMVTKTEGKGNGIKTNIINNVEIAKALARPPSYTTKYFGCELGAQSKFDEKTGTSLVNGAHNTSKLAGLLENFIKKFVQCYGCGNPETEIIITKTQMVNLKCAACGFISEVDMRDKLTNFILKNPPEQKK 151
BLAST of FC871062 vs. ExPASy Swiss-Prot
Match: IF5_RAT (Eukaryotic translation initiation factor 5 OS=Rattus norvegicus GN=Eif5 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.320e-42 Identity = 83/138 (60.14%), Postives = 102/138 (73.91%), Query Frame = 2 Query: 392 DAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGCGNPETEIIIT-KTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPES 802 D FYRYKMP++I K+EG+GNGIKT IVNMVD+AKAL RP +Y TKYFGCELGAQ++FD K +VNGSH+ KL +L+ FIKK+V C C NPET++ + K Q I C ACG+ +D KL TFILKNPPE+ Sbjct: 11 DQFYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFDVKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPECENPETDLHVNPKKQTIGNSCKACGYRGMLDTHHKLCTFILKNPPEN 148
BLAST of FC871062 vs. ExPASy Swiss-Prot
Match: IF5_PONAB (Eukaryotic translation initiation factor 5 OS=Pongo abelii GN=EIF5 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.320e-42 Identity = 83/138 (60.14%), Postives = 102/138 (73.91%), Query Frame = 2 Query: 392 DAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGCGNPETEIIIT-KTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPES 802 D FYRYKMP++I K+EG+GNGIKT IVNMVD+AKAL RP +Y TKYFGCELGAQ++FD K +VNGSH+ KL +L+ FIKK+V C C NPET++ + K Q I C ACG+ +D KL TFILKNPPE+ Sbjct: 11 DQFYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFDVKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPECENPETDLHVNPKKQTIGNSCKACGYRGMLDTHHKLCTFILKNPPEN 148
BLAST of FC871062 vs. ExPASy Swiss-Prot
Match: IF5_MOUSE (Eukaryotic translation initiation factor 5 OS=Mus musculus GN=Eif5 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.320e-42 Identity = 83/138 (60.14%), Postives = 102/138 (73.91%), Query Frame = 2 Query: 392 DAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGCGNPETEIIIT-KTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPES 802 D FYRYKMP++I K+EG+GNGIKT IVNMVD+AKAL RP +Y TKYFGCELGAQ++FD K +VNGSH+ KL +L+ FIKK+V C C NPET++ + K Q I C ACG+ +D KL TFILKNPPE+ Sbjct: 11 DQFYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFDVKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPECENPETDLHVNPKKQTIGNSCKACGYRGMLDTHHKLCTFILKNPPEN 148
BLAST of FC871062 vs. ExPASy Swiss-Prot
Match: IF5_HUMAN (Eukaryotic translation initiation factor 5 OS=Homo sapiens GN=EIF5 PE=1 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 5.320e-42 Identity = 83/138 (60.14%), Postives = 102/138 (73.91%), Query Frame = 2 Query: 392 DAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGCGNPETEIIIT-KTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPES 802 D FYRYKMP++I K+EG+GNGIKT IVNMVD+AKAL RP +Y TKYFGCELGAQ++FD K +VNGSH+ KL +L+ FIKK+V C C NPET++ + K Q I C ACG+ +D KL TFILKNPPE+ Sbjct: 11 DQFYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFDVKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPECENPETDLHVNPKKQTIGNSCKACGYRGMLDTHHKLCTFILKNPPEN 148
BLAST of FC871062 vs. ExPASy Swiss-Prot
Match: IF5_CAEEL (Eukaryotic translation initiation factor 5 OS=Caenorhabditis elegans GN=C37C3.2 PE=2 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 9.074e-42 Identity = 80/136 (58.82%), Postives = 99/136 (72.79%), Query Frame = 2 Query: 392 DAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPE 799 D FYRYKMPK+ K+EG+GNGIKT I NM +IAKAL RP Y TKYFGCELGAQ+ FD K +VNG HD KL +L+ FIKK+V C C NPET++ + K I+ KC ACG D+D++ KL+TFI+KNPP+ Sbjct: 11 DPFYRYKMPKLSAKVEGKGNGIKTVISNMSEIAKALERPPMYPTKYFGCELGAQTNFDAKNERYIVNGEHDANKLQDILDGFIKKFVLCKSCENPETQLFVRKNN-IKSKCKACGCSFDIDLKHKLSTFIMKNPPK 145
BLAST of FC871062 vs. ExPASy Swiss-Prot
Match: IF5_DROME (Eukaryotic translation initiation factor 5 OS=Drosophila melanogaster GN=eIF5 PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.310e-40 Identity = 83/155 (53.55%), Postives = 107/155 (69.03%), Query Frame = 2 Query: 356 MALLNIGADNRG--DAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGCGNPETEIIIT-KTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPESKKA 811 MA +N+ NR D FYRYKMP++ K+EG+GNGIKT +VNM ++A+A+ RPA+Y TKYFGCELGAQ+ FD K +VNGSHD KL LL+ FI+K+V C C NPET + ++ K Q I C ACGF + + K+NTFI+KNPP A Sbjct: 1 MATVNV---NRSVTDIFYRYKMPRLQAKVEGKGNGIKTVLVNMAEVARAIGRPATYPTKYFGCELGAQTLFDHKNERFVVNGSHDVNKLQDLLDGFIRKFVLCPECDNPETNLTVSAKNQTISQSCKACGFHGLLKVNHKVNTFIVKNPPSLNPA 152 The following BLAST results are available for this feature:
BLAST of FC871062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871062 ID=FC871062; Name=FC871062; organism=Citrus clementina; type=EST; length=813bpback to top |