FC871069
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871069 vs. ExPASy Swiss-Prot
Match: ATG12_MEDTR (Putative autophagy-related protein 12 OS=Medicago truncatula GN=ATG12 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.259e-28 Identity = 58/66 (87.88%), Postives = 63/66 (95.45%), Query Frame = 2 Query: 2 KFKISGSDKFAKVIEFLCRHLGRETLFVYVNSAFSPNPDELVIDLYNNFGFDGKLIVNYACSMAWG 199 KFKI+G+DKFAKVI+FL R L RE+LFVYVNSAFSPNPDELVIDLYNNFGFDGKL+VNYACSMAWG Sbjct: 30 KFKIAGTDKFAKVIDFLRRQLHRESLFVYVNSAFSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 95
BLAST of FC871069 vs. ExPASy Swiss-Prot
Match: AT12B_ARATH (Autophagy-related protein 12b OS=Arabidopsis thaliana GN=ATG12B PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.788e-26 Identity = 55/66 (83.33%), Postives = 60/66 (90.91%), Query Frame = 2 Query: 2 KFKISGSDKFAKVIEFLCRHLGRETLFVYVNSAFSPNPDELVIDLYNNFGFDGKLIVNYACSMAWG 199 KFK+SGSDKFA VI+FL R L ++LFVYVNSAFSPNPDE VIDLYNNFGFDGKL+VNYACSMAWG Sbjct: 29 KFKVSGSDKFANVIDFLRRQLHSDSLFVYVNSAFSPNPDESVIDLYNNFGFDGKLVVNYACSMAWG 94
BLAST of FC871069 vs. ExPASy Swiss-Prot
Match: AT12A_ARATH (Autophagy-related protein 12a OS=Arabidopsis thaliana GN=ATG12A PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.050e-26 Identity = 55/66 (83.33%), Postives = 60/66 (90.91%), Query Frame = 2 Query: 2 KFKISGSDKFAKVIEFLCRHLGRETLFVYVNSAFSPNPDELVIDLYNNFGFDGKLIVNYACSMAWG 199 KFKI G+DKFAKVI+FL R L ++LFVYVNSAFSPNPDE VIDLYNNFGFDGKL+VNYACSMAWG Sbjct: 31 KFKIPGTDKFAKVIDFLRRQLHSDSLFVYVNSAFSPNPDESVIDLYNNFGFDGKLVVNYACSMAWG 96
BLAST of FC871069 vs. ExPASy Swiss-Prot
Match: ATG12_ORYSJ (Autophagy-related protein 12 OS=Oryza sativa subsp. japonica GN=ATG12 PE=3 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 3.157e-23 Identity = 47/66 (71.21%), Postives = 59/66 (89.39%), Query Frame = 2 Query: 2 KFKISGSDKFAKVIEFLCRHLGRETLFVYVNSAFSPNPDELVIDLYNNFGFDGKLIVNYACSMAWG 199 KFKI G++KF K+I+FL R + ++T+F+YVNSAFSPNPDEL+IDLYNNFG DG+L+VNYA SMAWG Sbjct: 28 KFKIGGNEKFLKIIDFLRRQIHQDTVFLYVNSAFSPNPDELIIDLYNNFGIDGQLVVNYASSMAWG 93
BLAST of FC871069 vs. ExPASy Swiss-Prot
Match: ATG12_ORYSI (Autophagy-related protein 12 OS=Oryza sativa subsp. indica GN=ATG12 PE=3 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 3.157e-23 Identity = 47/66 (71.21%), Postives = 59/66 (89.39%), Query Frame = 2 Query: 2 KFKISGSDKFAKVIEFLCRHLGRETLFVYVNSAFSPNPDELVIDLYNNFGFDGKLIVNYACSMAWG 199 KFKI G++KF K+I+FL R + ++T+F+YVNSAFSPNPDEL+IDLYNNFG DG+L+VNYA SMAWG Sbjct: 28 KFKIGGNEKFLKIIDFLRRQIHQDTVFLYVNSAFSPNPDELIIDLYNNFGIDGQLVVNYASSMAWG 93
BLAST of FC871069 vs. ExPASy Swiss-Prot
Match: ATG12_CRYNE (Autophagy-related protein 12 OS=Cryptococcus neoformans GN=ATG12 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.175e-11 Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 2 Query: 5 FKISGSDKFAKVIEFLCRHLG---RETLFVYVNSAFSPNPDELVIDLYNNFGFDGKLIVNYACSMAWG 199 FK + KF VI FL + LG ++LF Y+N+AF+P PD+ V LY +FG +G LIVNY+ + AWG Sbjct: 38 FKATAGHKFQAVIMFLRQQLGMKKEDSLFTYINAAFAPAPDDTVGSLYKSFGTEGHLIVNYSNTQAWG 105 The following BLAST results are available for this feature:
BLAST of FC871069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC871069 ID=FC871069; Name=FC871069; organism=Citrus clementina; type=EST; length=596bpback to top |