FC871992
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871992 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 2.896e-70 Identity = 125/179 (69.83%), Postives = 142/179 (79.33%), Query Frame = 3 Query: 3 GDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPY 539 GDKK EPWWPVLKT DLI ++TTI WVTSGHHAAVNFGQY YGGYFPNRPTT R + TEDP+DE K F E PE LL T+PSQ QAT VM LD+LSTHSPDEEY+G++ E +W +PVINAAFE+F+GKL LEG+ID RN + L+NR GAG+V YELLKP SE GVTG GVPY Sbjct: 714 GDKKDEPWWPVLKTQDDLIGVVTTIAWVTSGHHAAVNFGQYGYGGYFPNRPTTTRIRMPTEDPTDEALKEFYESPEKVLLKTYPSQKQATLVMVTLDLLSTHSPDEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEHGVTGMGVPY 892
BLAST of FC871992 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 1.487e-66 Identity = 114/177 (64.41%), Postives = 141/177 (79.66%), Query Frame = 3 Query: 6 DKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 536 DKK EPWWPV T ++L++I+T I+WVTSGHHAAVNFGQY Y GYFPNRPT R NI E+ D++ K F+ +PE LL + PSQ+QA KVMA LD+LS+HSPDEEY+G+ EPAW +P++ AAFEKF G+L E EG ID RN +P+ +NR GAG+VPYELLKPFSEPGVTG+G+P Sbjct: 715 DKKDEPWWPVCDTKENLVQILTIIMWVTSGHHAAVNFGQYHYAGYFPNRPTVVRRNIPVEENRDDEMKKFMARPEEVLLQSLPSQMQAIKVMATLDILSSHSPDEEYMGEYAEPAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSEPGVTGRGIP 891
BLAST of FC871992 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.153e-57 Identity = 104/179 (58.10%), Postives = 129/179 (72.07%), Query Frame = 3 Query: 3 GDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSD-EQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 536 GDKK PWWP L +P+ L +TTIVWV + HHAAVNFGQY +GGYFPNRP+ AR + E+P D + FL+ P+ AL FPSQ+QAT VMA+LDVLSTHS DEEYLG E W D + AA+ F +L E+EG+ID RN D KL+NR GAG++PY+L+KPFS+ GVTG G+P Sbjct: 758 GDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQALRECFPSQVQATVVMAVLDVLSTHSTDEEYLGGEQTRPWNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTGMGIP 936
BLAST of FC871992 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 221.476 bits (563), Expect = 2.811e-57 Identity = 103/179 (57.54%), Postives = 130/179 (72.63%), Query Frame = 3 Query: 3 GDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSD-EQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 536 GDKK PWWP L +P+ L +TTIVWV + HHAAVNFGQY +GGYFPNRP+ AR + E+P D + FL+ P+ AL FPSQ+QAT VMA+LDVLS+HS DEEYLG E W D + AA++ F +L E+EG+ID RN D KL+NR GAG++PY+L+KPFS+ GVTG G+P Sbjct: 741 GDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQALRECFPSQVQATVVMAVLDVLSSHSTDEEYLGGEQTRPWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDSGVTGMGIP 919
BLAST of FC871992 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.158e-49 Identity = 93/179 (51.96%), Postives = 125/179 (69.83%), Query Frame = 3 Query: 6 DKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYL--GKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 536 DKK EPWWP L T +DL +I+T ++W+ SG HAA+NFGQY +GGY PNRPT R I E +D ++ F+ P+ + L + P+Q+QATKVMA+ + LSTHSPDEEYL +E++ W +D + F KF +L+++E I+ RN D KL+NR GAGM PYELL P S GVTG+G+P Sbjct: 736 DKKDEPWWPKLNTTQDLSQILTNMIWIASGQHAAINFGQYPFGGYVPNRPTLLRKLIPQE--TDPDYEMFMRNPQYSFLGSLPTQLQATKVMAVQETLSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTGRGIP 912
BLAST of FC871992 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 4.807e-49 Identity = 94/165 (56.97%), Postives = 119/165 (72.12%), Query Frame = 3 Query: 6 DKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKP 500 DK+ EPWWP L + ++L + + TI+WVTSGHHAAVNFGQY GY PNRPT AR N+ TE D+ + F+E PE LL+TFPSQ Q+ V+AILD+LSTHS DEEY+G EPAW +D VIN AFE+F+ ++ +D N DP +NR+GAGMVPY LL+P Sbjct: 746 DKQDEPWWPELDSHENLAQTLATIMWVTSGHHAAVNFGQYPMAGYIPNRPTMARRNMPTEIGGDDM-RDFVEAPEKVLLDTFPSQYQSAIVLAILDLLSTHSSDEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRP 909
BLAST of FC871992 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.710e-46 Identity = 91/178 (51.12%), Postives = 118/178 (66.29%), Query Frame = 3 Query: 6 DKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPA-WREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 536 D + WWP L T +DL+ +ITTI+W+ S HAA+NFGQY YGGY PNRP R I D SD ++ F+E P+ ++ PS +Q TK MA++D LSTHSPDEEY+G+ +P+ W D I AF F ++ +E ID RN DP RNR GAG++PYEL+ P SEPGVT +GVP Sbjct: 746 DHRDAEWWPKLSTVEDLVSVITTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLI--PDESDPEFTSFIEDPQKYFFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAGVLPYELMAPSSEPGVTCRGVP 921
BLAST of FC871992 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.500e-45 Identity = 90/178 (50.56%), Postives = 116/178 (65.17%), Query Frame = 3 Query: 6 DKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPA-WREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 536 D + WWP L T DL+ I+TT++W+ S HAA+NFGQY YGGY PNRP R I D SD ++ F+ PE ++ PS Q +K MA++D LSTHSPDEEY+G+ +P+ W D I AF F ++ +E I+ RNADP RNR GAG++PYELL P SEPGVT +GVP Sbjct: 739 DLRDADWWPELSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLI--PDESDPEYASFISHPEKYYFSSMPSLAQTSKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRRNRCGAGVLPYELLVPSSEPGVTCRGVP 914
BLAST of FC871992 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 1.769e-43 Identity = 85/177 (48.02%), Postives = 108/177 (61.02%), Query Frame = 3 Query: 6 DKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 536 DK+ PWWP L TP DL ++TT+VW+ S HAA+NFGQY GGY PNRP R + E D ++ + P L+ PS Q T M ++D LSTHS DEEYLG+ + AW DP AA +F + E I+ RNADP RNR GAG++PYEL+ P S PG+T +GVP Sbjct: 720 DKRGAPWWPRLSTPGDLASLLTTLVWLCSAQHAALNFGQYPLGGYIPNRPPLMRRLVPAE--GDPEYAHLVADPHRFFLSALPSLTQTTTFMTVIDTLSTHSADEEYLGERPDEAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPGITCRGVP 894
BLAST of FC871992 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 3.018e-43 Identity = 89/181 (49.17%), Postives = 109/181 (60.22%), Query Frame = 3 Query: 3 GDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGK---EIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 536 GD +H PWWP L TP DL I+TT+VW+ S HAA+NFGQY GGY PNRP R + + ++ FL P LN P ++ATK MA++D LSTHSPDEEYLG+ E W D AA F + E I+ RNAD +NR GAG++PYELL P S PGVT +GVP Sbjct: 733 GDLRHAPWWPPLSTPVDLASILTTLVWLASAQHAALNFGQYPLGGYVPNRPPLIRRLLPDLERDAAEYAAFLADPHRFFLNAMPGVLEATKFMAVVDTLSTHSPDEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSSPPGVTCRGVP 913 The following BLAST results are available for this feature:
BLAST of FC871992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC871992 ID=FC871992; Name=FC871992; organism=Citrus clementina; type=EST; length=628bpback to top |