FC872034
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872034 vs. ExPASy Swiss-Prot
Match: R3HD2_MOUSE (R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 1.127e-12 Identity = 61/223 (27.35%), Postives = 107/223 (47.98%), Query Frame = 3 Query: 255 FLVEALQ-NPRHRLTILRMELDIQRFLQNPDQQHFEFQHFP--TSYLRLAAHRVSQHYGLVTMVQENGIEGLGNRILVRKTAESKYPAVRLSEIPAKQSEESDKLEKIKIAIRRRPNAGCVNGANETGTKRSPVR---SVEERKEEYDRARARIFSGPSSPNSEDTLTQVSTDMKNIGFNRDEREIVRNSITDAEKIISIRDGAGLSRVAIFRDREKDRTDPD 905 FLV L+ NPR R+ +L++E +I F+ + + Q F+ FP TSY R+ HRV+ ++G+ ++ ++ G +++ KT+ ++ P R SE ++ E + I +R +A N+ R S+EER+EEY R R RIF+ + N ++S + + ++ R+I R + + S R + S + R TD D Sbjct: 157 FLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQ---FKKFPQMTSYHRMLLHRVAAYFGM-----DHNVDQTGKAVIINKTSSTRIPEQRFSE----HIKDEKNTEFQQRFILKRDDASMDRDDNQMRVPLQDGRRSKSIEEREEEYQRVRERIFARETGQNGYLNDIRLSKEAFSSSSHK-RRQIFRGNREGLSRTSSSRQSSTDSELKSLEPRPWSSTDSD 366
BLAST of FC872034 vs. ExPASy Swiss-Prot
Match: R3HD1_HUMAN (R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 1.471e-12 Identity = 57/187 (30.48%), Postives = 95/187 (50.80%), Query Frame = 3 Query: 255 FLVEALQN-PRHRLTILRMELDIQRFLQNPDQQHFEFQHFPTSYLRLAAHRVSQHYGLVTMVQENGIEGLGNRILVRKTAESKYPAVRLSEIPAKQSEESDKLEKI-KIAIRRRPNAGCVNGANETGTKRSPVR---SVEERKEEYDRARARIFSGPSSPNSEDTLTQVSTDMKNIGFNRDEREIVR 800 FLV L+N PR R+ +L++E +I F+ N + +F TSY R+ HRV+ ++GL ++ ++ G ++V KT+ ++ P + +E + DK E K I +R N+ N+ + R S+EER+EEY RAR RIFS S + E+ + ++ + R+I R Sbjct: 156 FLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRKKFPPM-TSYHRMLLHRVAAYFGL-----DHNVDQSGKSVIVNKTSNTRIPDQKFNE-----HIKDDKGEDFQKRYILKRDNSSFDKDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQDSLCSQENYIIDKRLQDEDASSTQQRRQIFR 331
BLAST of FC872034 vs. ExPASy Swiss-Prot
Match: ARP21_MOUSE (cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.471e-12 Identity = 62/239 (25.94%), Postives = 120/239 (50.21%), Query Frame = 3 Query: 255 FLVEALQN-PRHRLTILRMELDIQRFLQNPDQQHFEFQHFPTSYLRLAAHRVSQHYGLVTMVQENGIEGLGNRILVRKTAESKYPAVRLSE-IPAKQSEESDK---LEKIKIAIRRRPNAGCVNGANETGTKRSPVRSVEERKEEYDRARARIFSGPSSPNSEDTL---TQVSTDMKNIGFNRDEREIVRNSITDAEKIISIRDGAGLSRVAIFRDREKDRTDPDYDRSYERYVRELSN 947 FL+ L+N R R+ +L+ME ++ F+ + + + +F +SY R+ HRV+ ++GL ++ ++ G +++ KT+ ++ P R E + ++SEES K L++ +I + N ++ + +RS +S+EER+EEY R R RIF+ S + E +++ DM +R++ R + RD +G + + E + PD+ R++ + SN Sbjct: 151 FLINTLKNNSRDRMILLKMEQEMIDFIADSNNHYKKFPQM-SSYQRMLVHRVAAYFGL-----DHNVDQTGKSVIINKTSSTRIPEQRFCEHLKDEKSEESQKRFILKRDNSSIDKEDNQNRMHPFRDD--RRS--KSIEEREEEYQRVRERIFAHDSVCSQESLFLDNSRLQEDMHICNETYKKRQLFR----------AHRDSSGRTSGSRQSSSETELRWPDHQRAWSSTDSDSSN 369
BLAST of FC872034 vs. ExPASy Swiss-Prot
Match: R3HD2_BOVIN (R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.538e-12 Identity = 50/162 (30.86%), Postives = 85/162 (52.47%), Query Frame = 3 Query: 255 FLVEALQ-NPRHRLTILRMELDIQRFLQNPDQQHFEFQHFP--TSYLRLAAHRVSQHYGLVTMVQENGIEGLGNRILVRKTAESKYPAVRLSEIPAKQSEESDKLEKIKIAIRRRPNAGCVNGANETGTKRSPVR---SVEERKEEYDRARARIFSGPSSPN 722 FLV L+ NPR R+ +L++E +I F+ + + Q F+ FP TSY R+ HRV+ ++G+ ++ ++ G +++ KT+ ++ P R SE ++ E + I +R +A N+ R S+EER+EEY R R RIF+ + N Sbjct: 157 FLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQ---FKKFPQMTSYHRMLLHRVAAYFGM-----DHNVDQTGKAVIINKTSNTRIPEQRFSE----HIKDEKNTEFQQRFILKRDDASMDRDDNQIRVPLQDGRRSKSIEEREEEYQRVRERIFARETGQN 306
BLAST of FC872034 vs. ExPASy Swiss-Prot
Match: ARP21_HUMAN (cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 9.538e-12 Identity = 61/239 (25.52%), Postives = 112/239 (46.86%), Query Frame = 3 Query: 255 FLVEALQN-PRHRLTILRMELDIQRFLQNPDQQHFEFQHFPTSYLRLAAHRVSQHYGLVTMVQENGIEGLGNRILVRKTAESKYPAVRLSE-IPAKQSEESDKLEKIKIAIRRRPNAGCVNGANETGTKRSPVR------SVEERKEEYDRARARIFSGPSSPNSEDTLTQVSTDMKNIGFNRDEREIVRNSITDAEKIISIRDGAGLSRVAIFRDREKDRTDPDYDRSYERYVRELSN 947 FL+ L+N R R+ +L+ME +I F+ + + + +F +SY R+ HRV+ ++GL ++ ++ G +++ KT+ ++ P R E + ++ EES K I +R N+ N+ + P R S+EER+EEY R R RIF+ S + E + S + ++ I + + RDG+G + + E + D+ R++ + SN Sbjct: 152 FLINTLKNNSRDRMILLKMEQEIIDFIADNNNHYKKFPQM-SSYQRMLVHRVAAYFGL-----DHNVDQTGKSVIINKTSSTRIPEQRFCEHLKDEKGEESQKR-----FILKRDNSSIDKEDNQQN-RMHPFRDDRRSKSIEEREEEYQRVRERIFAHDSVCSQESLFVENSRLL-------EDSNICNETYKKRQLFRGNRDGSGRTSGSRQSSSENELKWSDHQRAWSSTDSDSSN 371 The following BLAST results are available for this feature:
BLAST of FC872034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872034 ID=FC872034; Name=FC872034; organism=Citrus clementina; type=EST; length=952bpback to top |