FC872123

Overview
NameFC872123
Unique NameFC872123
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length788
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9949 contig Ccv1_Contig9949:2..789. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH_SCHPO (Alcohol dehydrogenase OS=Schizosaccharomyces pombe GN=adh1 PE=1 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 4.542e-59
Identity = 115/236 (48.73%), Postives = 150/236 (63.56%), Query Frame = 2
Query:   68 PKTGAACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKA 775
            P    A VF  H    + VK   VP  A+    EVLV + Y+GVCHTDLHA +GDWP   ++PL+GGHEGAG +V +G G +T LK+G  VG+KW+  SC +CE C +  E  C   Q SGY+VDGTFQ Y ++ A H T IP+ +PLE AAPI+CAG+T YRAL  SK  PG++               QYA AM +RV+AIDTGDDK +L  S+GA+ F+DF+  +D  + +KA
Sbjct:    4 PDKQLAAVFHTHGGP-ENVKFEEVPV-AEPGQDEVLVNIKYTGVCHTDLHALQGDWPLPAKMPLIGGHEGAGVVVKVGAG-VTRLKIGDRVGVKWMNSSCGNCEYCMKAEETICPHIQLSGYTVDGTFQHYCIANATHATIIPESVPLEVAAPIMCAGITCYRALKESKVGPGEWICIPGAGGGLGHLAVQYAKAMAMRVVAIDTGDDKAELVKSFGAEVFLDFKKEADMIEAVKA 236          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH2_CANAL (Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH2 PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.566e-58
Identity = 113/238 (47.48%), Postives = 147/238 (61.76%), Query Frame = 2
Query:   59 LDYPKTGAACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIK 772
            +  P T  A +F+ +   +++ KD PVP+    K  E+L+ V YSGVCHTDLHAWKGDWP   +LPLVGGHEGAG +VA+G+  +   KVG   G+KWL  SCL+CE C+ G E  C++A  SGY+ DG+FQQYA + A     IP G  L   APILCAGVTVY+AL  ++   GQ+               QYA AMG RV+AID G+DK +   S GA+ F+DF    D  + +K
Sbjct:    1 MSVPTTQKAVIFETNGGKLEY-KDIPVPKP---KANELLINVKYSGVCHTDLHAWKGDWPLATKLPLVGGHEGAGVVVALGEN-VKGWKVGDYAGVKWLNGSCLNCEYCQSGAEPNCAEADLSGYTHDGSFQQYATADAVQAARIPAGTDLANVAPILCAGVTVYKALKTAELEAGQWVAISGAAGGLGSLAVQYAKAMGYRVLAIDGGEDKGEFVKSLGAETFIDFTKEKDVVEAVK 233          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH3_EMENI (Alcohol dehydrogenase 3 OS=Emericella nidulans GN=alcC PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.119e-57
Identity = 111/218 (50.92%), Postives = 138/218 (63.30%), Query Frame = 2
Query:  125 KDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLT-NLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKA 775
            K  PVP+     P E+LV++ YSGVCHTDLHA KGDWP   ++PL+GGHEGAG +VA G+     + K+G   GIKWL  SCL CE C +  E  C  A  SGY+VDGTFQQY +  A   + IPD +PL+ AAPILCAG+TVY+ L  S ARPGQ                QYA AMGLR IAID+GD+K+ +C   GA+ F+DF   +D    +KA
Sbjct:   22 KQVPVPKPG---PDEILVKMRYSGVCHTDLHAMKGDWPLPSKMPLIGGHEGAGVVVAKGELVKDEDFKIGDRAGIKWLNGSCLSCEMCMQADEPLCPHASLSGYTVDGTFQQYTIGKAALASKIPDNVPLDAAAPILCAGITVYKGLKESGARPGQTVAIVGAGGGLGSLAQQYAKAMGLRTIAIDSGDEKKAMCEQLGAEVFIDFSKSADVVADVKA 236          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH4_KLULA (Alcohol dehydrogenase 4, mitochondrial OS=Kluyveromyces lactis GN=ADH4 PE=3 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.461e-57
Identity = 112/242 (46.28%), Postives = 147/242 (60.74%), Query Frame = 2
Query:   29 STAIKTMSQTLDYPKTGAACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSD 754
            S +   ++ +   P+T    +F ++   +++ KD PVP+    K  E+L+ V YSGVCHTDLHAWKGDWP   +LPLVGGHEGAG +VA G+  + N ++G   GIKWL  SC+ CE C +G E+ C QA  SGY+ DG+FQQYA + A     IP G  L + APILCAGVTVY+AL  +  +PGQ+               QYA AMGLRV+ ID GD K +L    G + F+DF    D
Sbjct:   18 SRSFLRLNSSFAIPETQKGVIFYENGGKLEY-KDLPVPKP---KANEILINVKYSGVCHTDLHAWKGDWPLPVKLPLVGGHEGAGIVVAKGEN-VKNFEIGDYAGIKWLNGSCMSCELCEQGYESNCLQADLSGYTHDGSFQQYATADAVQAAQIPKGTDLAEIAPILCAGVTVYKALKTADLKPGQWVAISGAAGGLGSLAVQYAKAMGLRVLGIDGGDGKEELFKQCGGEVFIDFRKSKD 254          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH1_PICST (Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.492e-57
Identity = 116/242 (47.93%), Postives = 148/242 (61.16%), Query Frame = 2
Query:   59 LDYPKTGAACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 784
            +  P T  A VF+ +   + + KD PVP     KP E+L+ V YSGVCHTDLHAWKGDWP   +LPLVGGHEGAG +V IG   +T  ++G   GIKWL  SCL+CE C+   E  C++A  SGY+ DG+FQQYA + A     +P G  L QAAPILCAG+TVY+AL  ++ +PG +               QYA AMG RVIAID G++K +   S GA+ +VDF    D  K I+   D
Sbjct:    1 MSVPTTQKAVVFESNGGPLLY-KDIPVPTP---KPNEILINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVGIGSN-VTGWELGDYAGIKWLNGSCLNCEFCQHSDEPNCAKADLSGYTHDGSFQQYATADAVQAARLPKGTDLAQAAPILCAGITVYKALKTAQIQPGNWVCISGAGGGLGSLAIQYAKAMGFRVIAIDGGEEKGEFVKSLGAEAYVDFTVSKDIVKDIQTATD 237          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH1_ASPFN (Alcohol dehydrogenase 1 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=adh1 PE=2 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.492e-57
Identity = 108/217 (49.77%), Postives = 139/217 (64.06%), Query Frame = 2
Query:  125 KDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKA 775
            K  PVP+     P E+LV+V YSGVCHTDLHA KGDWP   ++PLVGGHEGAG +VA GD  +T  ++G + G+KWL  SCL CE C++  E  C  A  SGY+VDGTFQQYA+  A H + +P  +PL+  AP+LCAG+TVY+ L  S  RPGQ                QYA AMG+RV+AID G++K+ +C   GA+ +VDF    D    +KA
Sbjct:   22 KQIPVPKPG---PDEILVKVRYSGVCHTDLHALKGDWPLPVKMPLVGGHEGAGVVVARGD-LVTEFEIGDHAGLKWLNGSCLACEFCKQADEPLCPNASLSGYTVDGTFQQYAIGKATHASKLPKNVPLDAVAPVLCAGITVYKGLKESGVRPGQTVAIVGAGGGLGSLALQYAKAMGIRVVAIDGGEEKQAMCEQLGAEAYVDFTKTQDLVADVKA 234          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH1_EMENI (Alcohol dehydrogenase 1 OS=Emericella nidulans GN=alcA PE=3 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 2.756e-56
Identity = 106/217 (48.85%), Postives = 140/217 (64.52%), Query Frame = 2
Query:  125 KDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKA 775
            K  PVP+     P ++LV++ YSGVCHTDLHA  G WP   ++PLVGGHEGAG +VA G+  +   ++G   GIKWL  SC +CE CR+  +  C++AQ SGY+VDGTFQQYA+  A H + IP G+PL+ AAP+LCAG+TVY+ L  +  RPGQ                QYA AMG+RV+A+D GD+KR +C S G + +VDF    D    +KA
Sbjct:   22 KQIPVPKPG---PDQILVKIRYSGVCHTDLHAMMGHWPIPVKMPLVGGHEGAGIVVAKGE-LVHEFEIGDQAGIKWLNGSCGECEFCRQSDDPLCARAQLSGYTVDGTFQQYALGKASHASKIPAGVPLDAAAPVLCAGITVYKGLKEAGVRPGQTVAIVGAGGGLGSLAQQYAKAMGIRVVAVDGGDEKRAMCESLGTETYVDFTKSKDLVADVKA 234          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH1_CANAL (Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH1 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.756e-56
Identity = 114/239 (47.70%), Postives = 144/239 (60.25%), Query Frame = 2
Query:   68 PKTGAACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 784
            PKT  A VF  +   + + KD+PVP     KP E+L+ V YSGVCHTDLHA KGDWP   +LPLVGGHEGAG +V +G+  +   K+G   GIKWL  SC+ CE C++G E  C +A  SGY+ DG+F+QYA + A     IP G  L   APILCAGVTVY+AL  +    GQ+               QYA AMGLRV+AID GD+K +   S GA+ +VDF    D  + +K   D
Sbjct:    6 PKTQKAVVFDTNGGQLVY-KDYPVPTP---KPNELLIHVKYSGVCHTDLHARKGDWPLATKLPLVGGHEGAGVVVGMGEN-VKGWKIGDFAGIKWLNGSCMSCEFCQQGAEPNCGEADLSGYTHDGSFEQYATADAVQAAKIPAGTDLANVAPILCAGVTVYKALKTADLAAGQWVAISGAGGGLGSLAVQYARAMGLRVVAIDGGDEKGEFVKSLGAEAYVDFTKDKDIVEAVKKATD 239          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH1_KLUMA (Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus GN=ADH1 PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.979e-55
Identity = 107/229 (46.72%), Postives = 139/229 (60.70%), Query Frame = 2
Query:   68 PKTGAACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSD 754
            P+T    +F +H   + + KD PVP+    KP E+L+ V YSGVCHTDLHAW+GDWP   +LPLVGGHEGAG +VA+G+  +T  ++G   GIKWL  SC+ CE C    E  C +A  SGY+ DG+FQQYA + A     IP  + L + APILCAGVTVY+AL ++  + G +               QYA AMG RV+ ID GD+K KL    G + F+DF    D
Sbjct:    4 PETQKGVIFYEHGGELQY-KDIPVPKP---KPNELLINVKYSGVCHTDLHAWQGDWPLDTKLPLVGGHEGAGIVVAMGEN-VTGWEIGDYAGIKWLNGSCMSCEECELSNEPNCPKADLSGYTHDGSFQQYATADAVQAARIPKNVDLAEVAPILCAGVTVYKALKSAHIKAGDWVAISGACGGLGSLAIQYAKAMGYRVLGIDAGDEKAKLFKELGGEYFIDFTKTKD 227          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH3_KLULA (Alcohol dehydrogenase 3, mitochondrial OS=Kluyveromyces lactis GN=ADH3 PE=3 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 6.787e-55
Identity = 109/240 (45.42%), Postives = 146/240 (60.83%), Query Frame = 2
Query:   35 AIKTMSQTLDYPKTGAACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSD 754
            +I+T++ ++  P+T    +F ++   +++ KD PVP+    KP E+L+ V YSGVCHTDLHAWKGDWP   +LPLVGGHEGAG +VA+G+  +    +G   GIKWL  SC+ CE C    E+ C  A  SGY+ DG+FQQYA + A     IP G  L + APILCAGVTVY+AL ++  + G +               QYA AMG RV+ ID G++K KL    G + FVDF    D
Sbjct:   21 SIRTLATSV--PETQKGVIFYENGGKLEY-KDIPVPKP---KPNEILINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGEN-VKGWNIGDFAGIKWLNGSCMSCEYCELSNESNCPDADLSGYTHDGSFQQYATADAVQAARIPKGTDLAEVAPILCAGVTVYKALKSANLKAGDWVAISGAAGGLGSLAVQYAKAMGYRVVGIDGGEEKGKLVKQLGGEAFVDFTKTKD 253          
The following BLAST results are available for this feature:
BLAST of FC872123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
ADH_SCHPO4.542e-5948.73Alcohol dehydrogenase OS=Schizosaccharomyces pombe... [more]
ADH2_CANAL8.566e-5847.48Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH... [more]
ADH3_EMENI1.119e-5750.92Alcohol dehydrogenase 3 OS=Emericella nidulans GN=... [more]
ADH4_KLULA1.461e-5746.28Alcohol dehydrogenase 4, mitochondrial OS=Kluyvero... [more]
ADH1_PICST2.492e-5747.93Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1... [more]
ADH1_ASPFN2.492e-5749.77Alcohol dehydrogenase 1 OS=Aspergillus flavus (str... [more]
ADH1_EMENI2.756e-5648.85Alcohol dehydrogenase 1 OS=Emericella nidulans GN=... [more]
ADH1_CANAL2.756e-5647.70Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH... [more]
ADH1_KLUMA3.979e-5546.72Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus... [more]
ADH3_KLULA6.787e-5545.42Alcohol dehydrogenase 3, mitochondrial OS=Kluyvero... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH02ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB2CH02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872123 ID=FC872123; Name=FC872123; organism=Citrus clementina; type=EST; length=788bp
GGGGACTCTCTCTTTCTCTCTTCACAACTCTACAGCAATCAAAACTATGT
CACAAACCCTCGATTACCCCAAGACCGGCGCAGCCTGCGTCTTCAAAGAC
CACAATGCCAACATTGATTTCGTCAAGGATCACCCAGTCCCCCAACAGGC
TGACCTCAAGCCTGGAGAGGTCCTCGTTCGTGTCGACTACTCTGGTGTAT
GCCACACCGATCTTCACGCTTGGAAAGGTGACTGGCCGGCGAAGCCTCGT
CTACCCCTCGTAGGTGGTCATGAGGGTGCAGGTCCAATCGTGGCCATCGG
AGACGGTACATTGACTAACCTCAAAGTTGGTCAAAACGTCGGAATCAAAT
GGCTCGCCGACTCGTGTCTCGACTGCGAGAACTGTCGTGAAGGTATCGAG
GCTACATGTTCTCAGGCTCAATGCTCCGGATACTCTGTCGACGGTACTTT
CCAACAATACGCAGTATCTTACGCTCGTCACGTCACCCCTATTCCCGACG
GATTACCCTTGGAACAAGCCGCTCCTATCTTGTGCGCTGGAGTTACTGTC
TATCGTGCTCTCTTGAACTCGAAAGCGAGACCTGGACAATATGTCGCCAT
TGTGGGTGCTGGAGGAGGTCTAGGACATCTAGCTGTGCAATACGCTGCCG
CCATGGGACTTCGAGTCATCGCCATCGACACTGGTGACGACAAGAGGAAA
CTTTGTGCCTCATACGGTGCCGACAAATTCGTCGATTTCGAGGATCACTC
GGATCCCGAGAAGTTTATCAAAGCGATCAAGGATATGT
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