FC872150

Overview
NameFC872150
Unique NameFC872150
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length445
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872150 vs. ExPASy Swiss-Prot
Match: ETO1_ARATH (Ethylene-overproduction protein 1 OS=Arabidopsis thaliana GN=ETO1 PE=1 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 5.930e-44
Identity = 84/105 (80.00%), Postives = 93/105 (88.57%), Query Frame = 3
Query:    3 EKRSEYCDRDMAKSDLSMATQLDPMRTYPYRYRAAVLMDDHKEAEAIAELSRAIAFKPDLQLLHLRAAFLDSMGDHLHTQRDCEAALCLDPNHTDTLELYDKATE 317
            EKRSEYCDR+MA+SDL +ATQLDP+RTYPYRYRAAVLMDDHKE+EAI ELSRAI+FKPDLQLLHLRAAF DSMG+     +DCEAALC+DP H DTLELY KA E
Sbjct:  842 EKRSEYCDREMAQSDLCLATQLDPLRTYPYRYRAAVLMDDHKESEAIDELSRAISFKPDLQLLHLRAAFYDSMGEGASAIKDCEAALCIDPGHADTLELYHKARE 946          

HSP 2 Score: 67.0106 bits (162), Expect = 3.879e-11
Identity = 34/92 (36.96%), Postives = 52/92 (56.52%), Query Frame = 3
Query:    3 EKRSEYCDRDMAKSDLSMATQLDPMRTYPYRYRAAVLMDDHKEAEAIAELSRAIAFKPDLQLLHLRAAFLDSMGDHLHTQRDCEAALCLDPN 278
            ++RS YC       DL  AT+ DP  T+PY++RA  L+++++   AIAEL++ + FK     L +RA     M D+    +D  A L L+PN
Sbjct:  513 QERSLYCSGKEKLLDLDTATEFDPTLTFPYKFRAVALVEENQFGAAIAELNKILGFKASPDCLEMRAWISIGMEDYEGALKDIRALLTLEPN 604          
BLAST of FC872150 vs. ExPASy Swiss-Prot
Match: ETOL2_ARATH (ETO1-like protein 2 OS=Arabidopsis thaliana GN=EOL2 PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 2.850e-38
Identity = 73/109 (66.97%), Postives = 91/109 (83.49%), Query Frame = 3
Query:    3 EKRSEYCDRDMAKSDLSMATQLDPMRTYPYRYRAAVLMDDHKEAEAIAELSRAIAFKPDLQLLHLRAAFLDSMGDHLHTQRDCEAALCLDPNHTDTLELYDKATERAAS 329
            EKRSEYC+R+ AK DL MAT LDP+RTYPYRYRAAVLMDD +E EA+ ELS+AIAF+P+LQ LHLRAAF ++ G+     +DCEAALCLDPNHT+TL LY ++ ++A+S
Sbjct:  808 EKRSEYCEREKAKEDLDMATTLDPLRTYPYRYRAAVLMDDQRETEAVEELSKAIAFRPELQTLHLRAAFHEATGNLSLATQDCEAALCLDPNHTETLHLYSRSKDQASS 916          
BLAST of FC872150 vs. ExPASy Swiss-Prot
Match: ETOL1_ARATH (ETO1-like protein 1 OS=Arabidopsis thaliana GN=EOL1 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 3.853e-35
Identity = 71/102 (69.61%), Postives = 81/102 (79.41%), Query Frame = 3
Query:    3 EKRSEYCDRDMAKSDLSMATQLDPMRTYPYRYRAAVLMDDHKEAEAIAELSRAIAFKPDLQLLHLRAAFLDSMGDHLHTQRDCEAALCLDPNHTDTLELYDK 308
            EKRSEYCDR++AKSDL M T+LDP+R YPYRYRAAVLMD  KE EAI ELSRAIAFK DL LLHLRAAF + +GD     RDC AAL +DPNH + LEL+ +
Sbjct:  781 EKRSEYCDRELAKSDLEMVTRLDPLRVYPYRYRAAVLMDSRKEREAITELSRAIAFKADLHLLHLRAAFHEHIGDVTSALRDCRAALSVDPNHQEMLELHSR 882          

HSP 2 Score: 71.633 bits (174), Expect = 1.575e-12
Identity = 37/93 (39.78%), Postives = 51/93 (54.84%), Query Frame = 3
Query:    3 EKRSEYCDRDMAKSDLSMATQLDPMRTYPYRYRAAVLMDDHKEAEAIAELSRAIAFKPDLQLLHLRAAFLDSMGDHLHTQRDCEAALCLDPNH 281
            ++RS YC+ D    DL  AT+LDP  TYPY YRA   M       A+ E++R + FK  L+ L +R      M D+    RD +AAL L P++
Sbjct:  452 QERSFYCEGDKKLEDLEKATELDPTLTYPYMYRAVTRMSKQNAKAALEEINRILGFKLALECLEIRFCLYLGMDDYEAALRDIQAALTLCPDY 544          
The following BLAST results are available for this feature:
BLAST of FC872150 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ETO1_ARATH5.930e-4480.00Ethylene-overproduction protein 1 OS=Arabidopsis t... [more]
ETOL2_ARATH2.850e-3866.97ETO1-like protein 2 OS=Arabidopsis thaliana GN=EOL... [more]
ETOL1_ARATH3.853e-3569.61ETO1-like protein 1 OS=Arabidopsis thaliana GN=EOL... [more]
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Properties
Property NameValue
Genbank descriptionC05701C01SK AbsCOv1 Citrus clementina cDNA clone C05701C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872150 ID=FC872150; Name=FC872150; organism=Citrus clementina; type=EST; length=445bp
ATGAGAAGCGTTCGGAATACTGTGACCGTGACATGGCAAAAAGTGATCTT
AGTATGGCAACACAACTTGATCCCATGAGGACATACCCATATAGATACAG
GGCAGCAGTTTTAATGGATGATCACAAAGAAGCTGAAGCCATAGCAGAAC
TTTCAAGGGCCATAGCTTTCAAGCCAGACCTGCAACTGCTACATCTCCGA
GCAGCATTTCTCGACTCGATGGGCGATCATCTCCACACCCAAAGAGACTG
TGAAGCAGCCCTCTGTCTTGATCCCAATCACACCGATACACTTGAACTCT
ATGATAAAGCAACGGAAAGGGCAGCTTCTGATGAAATCTGCCCTCGTTGG
AAGATTAAAAATTACAAATGTATTACATTTTGCTAAGCAGTTACTATGTA
TTGTCAACTTTTCTCCATGTTGGGTTGTTCTACAAAATTTGAAAT
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