FC872238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872238 vs. ExPASy Swiss-Prot
Match: ALKB8_XENTR (Alkylated DNA repair protein alkB homolog 8 OS=Xenopus tropicalis GN=alkbh8 PE=2 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 8.417e-44 Identity = 84/148 (56.76%), Postives = 108/148 (72.97%), Query Frame = 3 Query: 216 LEKKYVHRVYDAIAPHFSSTRFAKWPKVATFLNSLPSGSLVLDAGCGNGKYLGLNPDCFFIGCDISPSLIKICADRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKW 659 LE++YVH+VYD IA HFSSTR WPK+ FL SLP GSLV D GCGNGKYLG+N D IGCD S +L+ IC +R E V DA+++P+R+ DA ISIAV+HH +TE RR A++EL+R+++KG LI VWA+EQE K +K+ Sbjct: 369 LEREYVHKVYDDIAGHFSSTRHTPWPKIGDFLASLPKGSLVADVGCGNGKYLGVNKDLCMIGCDRSKNLVDICRERTFEAFVCDALSVPFRAGAFDACISIAVIHHFATEERRIAALQELIRLLRKGGKALIYVWALEQEYKKNKSKY 516
BLAST of FC872238 vs. ExPASy Swiss-Prot
Match: ALKB8_MOUSE (Alkylated DNA repair protein alkB homolog 8 OS=Mus musculus GN=Alkbh8 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.198e-43 Identity = 83/157 (52.87%), Postives = 113/157 (71.97%), Query Frame = 3 Query: 189 SSSIKSTPELEKKYVHRVYDAIAPHFSSTRFAKWPKVATFLNSLPSGSLVLDAGCGNGKYLGLNPDCFFIGCDISPSLIKICADRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKW 659 + S K ELE+K+VH+VY+ IA HFSSTR + WP++ FL +LPSGS+V D GCGNGKYLG+N D + IGCD S +L+ IC +R + LV DA+ +P RS DA ISIAV+HH +T RR +A++EL R+++ G LI VWA+EQE K+ +K+ Sbjct: 361 TESSKEALELEQKHVHQVYNEIASHFSSTRHSPWPRIVEFLKALPSGSIVADIGCGNGKYLGINKDLYMIGCDRSQNLVDICRERQFQALVCDALAVPVRSGSCDACISIAVIHHFATAERRVEALQELARLLRPGGQALIYVWAMEQEYKNQKSKY 517
BLAST of FC872238 vs. ExPASy Swiss-Prot
Match: ALKB8_BOVIN (Alkylated DNA repair protein alkB homolog 8 OS=Bos taurus GN=ALKBH8 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.344e-41 Identity = 82/155 (52.90%), Postives = 107/155 (69.03%), Query Frame = 3 Query: 195 SIKSTPELEKKYVHRVYDAIAPHFSSTRFAKWPKVATFLNSLPSGSLVLDAGCGNGKYLGLNPDCFFIGCDISPSLIKICADRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKW 659 S K +LE+ YVHRVY+ IA HFSSTR WP + FL +LPSGSLV D GCGNGKYLG+N + + IGCD S +L+ IC +R ++ V DA+ +P RS DA ISIAV+HH +T RR A++ELVR+++ G LI VWA+EQE +K+ Sbjct: 363 SDKEALQLEQDYVHRVYEEIARHFSSTRHTPWPHIVEFLKALPSGSLVADIGCGNGKYLGINNELYMIGCDHSQNLVDICRERQYQAFVCDALAVPIRSGSCDACISIAVIHHFATAERRVAALQELVRLLRPGGKALIYVWAMEQEYNKKKSKY 517
BLAST of FC872238 vs. ExPASy Swiss-Prot
Match: ALKB8_HUMAN (Alkylated DNA repair protein alkB homolog 8 OS=Homo sapiens GN=ALKBH8 PE=1 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 1.138e-40 Identity = 79/155 (50.97%), Postives = 106/155 (68.39%), Query Frame = 3 Query: 195 SIKSTPELEKKYVHRVYDAIAPHFSSTRFAKWPKVATFLNSLPSGSLVLDAGCGNGKYLGLNPDCFFIGCDISPSLIKICADRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKW 659 S K LE++YVH+VY+ IA HFSSTR WP + FL +LPSGS+V D GCGNGKYLG+N + + IGCD S +L+ IC +R + V DA+ +P RS DA ISIAV+HH +T RR A++E+VR+++ G LI VWA+EQE +K+ Sbjct: 363 SDKEASRLEQEYVHQVYEEIAGHFSSTRHTPWPHIVEFLKALPSGSIVADIGCGNGKYLGINKELYMIGCDRSQNLVDICRERQFQAFVCDALAVPVRSGSCDACISIAVIHHFATAERRVAALQEIVRLLRPGGKALIYVWAMEQEYNKQKSKY 517
BLAST of FC872238 vs. ExPASy Swiss-Prot
Match: ALKB8_MACFA (Alkylated DNA repair protein alkB homolog 8 OS=Macaca fascicularis GN=ALKBH8 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.646e-40 Identity = 77/155 (49.68%), Postives = 106/155 (68.39%), Query Frame = 3 Query: 195 SIKSTPELEKKYVHRVYDAIAPHFSSTRFAKWPKVATFLNSLPSGSLVLDAGCGNGKYLGLNPDCFFIGCDISPSLIKICADRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKW 659 S + LE++YVH+VY+ IA HFSSTR WP + FL +LPSGS+V D GCGNGKYLG+N + + +GCD S +L+ IC +R + V DA+ +P RS DA ISIAV+HH +T RR A++E+VR+++ G LI VWA+EQE +K+ Sbjct: 363 SDEEASRLEQEYVHQVYEEIAGHFSSTRHTPWPHIVEFLKALPSGSIVADIGCGNGKYLGVNKELYMVGCDRSQNLVDICRERQFQAFVCDALAVPVRSGSCDACISIAVIHHFATAERRVAALQEIVRLLRPGGKALIYVWAMEQEYNKQKSKY 517
BLAST of FC872238 vs. ExPASy Swiss-Prot
Match: TRM9_YEAST (tRNA (uracil-5-)-methyltransferase TRM9 OS=Saccharomyces cerevisiae GN=TRM9 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.327e-35 Identity = 73/148 (49.32%), Postives = 100/148 (67.57%), Query Frame = 3 Query: 198 IKSTPELEKKYVHRVYDAIAPHFSSTRFAKWPKVATFLNSLPSGSLVLDAGCGNGKYLGLNPDCFFIGCDISPSLIKICA---DRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQ 632 I E E++YVH+VY+ IAPHFS TR+ WP V FL + P GS+ +D GCGNGKYLG+NPD + IG D S LI+ CA + + +LVAD +NLP++++ D AISIAV+HH ST RR + I ++ +++G LI WA+EQ Sbjct: 3 INQAAEKEQEYVHKVYNEIAPHFSQTRYKPWPIVTQFLKTRPMGSIGIDVGCGNGKYLGVNPDIYIIGSDRSDGLIE-CARGINPSYNLLVADGLNLPHKNETFDFAISIAVVHHWSTRERRVEVIRHVLSKLRQGGQALIYCWALEQ 149
BLAST of FC872238 vs. ExPASy Swiss-Prot
Match: K1456_MOUSE (Putative methyltransferase KIAA1456 OS=Mus musculus GN=Kiaa1456 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.759e-33 Identity = 68/143 (47.55%), Postives = 95/143 (66.43%), Query Frame = 3 Query: 213 ELEKKYVHRVYDAIAPHFSSTRFAKWPKVATFLNSLPSGSLVLDAGCGNGKYLGLNPDCFFIGCDISPSLIKICADRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDK 641 ELEK++VH VY+ AP+F+ + WP+V FL GSLV D GCG GKYL +N +GCD L++I +RG EV+V D +NLP+R DA ISI V+HH ST+ RR +AI+E+ RV+ G ++I VWA+EQ+++ Sbjct: 7 ELEKRHVHSVYENTAPYFTDLQSKAWPRVRQFLQDQKPGSLVADIGCGTGKYLKVNSQVHTLGCDYCGPLVEIARNRGCEVMVCDNLNLPFRDQGFDAIISIGVIHHFSTKERRIRAIKEMARVLAPGGQLMIYVWAMEQKNR 149
BLAST of FC872238 vs. ExPASy Swiss-Prot
Match: K1456_HUMAN (Putative methyltransferase KIAA1456 OS=Homo sapiens GN=C8orf79 PE=2 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 1.759e-33 Identity = 66/143 (46.15%), Postives = 96/143 (67.13%), Query Frame = 3 Query: 213 ELEKKYVHRVYDAIAPHFSSTRFAKWPKVATFLNSLPSGSLVLDAGCGNGKYLGLNPDCFFIGCDISPSLIKICADRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDK 641 +LEK++VH VY++ AP+FS + WP+V FL GSL+ D GCG GKYL +N +GCD L++I +RG E +V D +NLP+R + DA ISI V+HH ST+ RR +AI+E+ RV+ G ++I VWA+EQ+++ Sbjct: 7 QLEKQHVHNVYESTAPYFSDLQSKAWPRVRQFLQEQKPGSLIADIGCGTGKYLKVNSQVHTVGCDYCGPLVEIARNRGCEAMVCDNLNLPFRDEGFDAIISIGVIHHFSTKQRRIRAIKEMARVLVPGGQLMIYVWAMEQKNR 149
BLAST of FC872238 vs. ExPASy Swiss-Prot
Match: YAZ3_SCHPO (Uncharacterized protein C13D6.03c OS=Schizosaccharomyces pombe GN=SPAC13D6.03c PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.297e-33 Identity = 68/142 (47.89%), Postives = 100/142 (70.42%), Query Frame = 3 Query: 213 ELEKKYVHRVYDAIAPHFSSTRFAKWPKVATFLNSLPSGSLVLDAGCGNGKYLGLNPDCFFIGCDISPSLIKICADRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQED 638 E E +YVH+VYD IA HFS TR+ WP V FL SLP GS+ +D GCGNGKY +NP+ + IG D L+KI ++ G ++++D +++P+ S+ D A+SIAV+HH S E+RR +A++E++R + KG L VWA+EQ++ Sbjct: 4 EYENEYVHQVYDKIATHFSDTRYKPWPVVEKFLKSLPLGSVGVDIGCGNGKYQKVNPNVYMIGSDRCVKLVKIASNLG-PMVISDGLHVPHPSNRFDFALSIAVIHHFSNENRRLQAVQEVLRPLVKGGKALFFVWALEQKN 144
BLAST of FC872238 vs. ExPASy Swiss-Prot
Match: K1456_BOVIN (Putative methyltransferase KIAA1456 homolog OS=Bos taurus PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.297e-33 Identity = 67/143 (46.85%), Postives = 95/143 (66.43%), Query Frame = 3 Query: 213 ELEKKYVHRVYDAIAPHFSSTRFAKWPKVATFLNSLPSGSLVLDAGCGNGKYLGLNPDCFFIGCDISPSLIKICADRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDK 641 +LEK++VH VY++ AP+FS + WP+V FL GSL+ D GCG GKYL +N +GCD L++I RG EV+V D +NLP+R DA ISI V+HH ST+ RR +AI+E+ RV+ G ++I VWA+EQ+++ Sbjct: 7 QLEKQHVHDVYESTAPYFSDLQSKAWPRVRQFLQEQKPGSLIADIGCGTGKYLKVNSQVHTLGCDYCAPLVEIARSRGCEVMVCDNLNLPFRDQGFDAIISIGVIHHFSTKQRRIRAIKEMARVLVPGGQLMIYVWAMEQKNR 149 The following BLAST results are available for this feature:
BLAST of FC872238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872238 ID=FC872238; Name=FC872238; organism=Citrus clementina; type=EST; length=748bpback to top |