FC872252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872252 vs. ExPASy Swiss-Prot
Match: NAC8_ARATH (NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1) HSP 1 Score: 401.364 bits (1030), Expect = 3.736e-111 Identity = 189/262 (72.14%), Postives = 215/262 (82.06%), Query Frame = 3 Query: 33 MAGPSWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPRGVKFDPSDQEIVWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSAAHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVRGGKAEKTNWVMHQYHLGTEEDEKDDNYVISKIFYQQQQ---AKYGDKIEQDILEST-GAIIPKVDPVTPKSVTPDPPRTER 806 MAG SWL+DSNRIATKI SAS + DP +V WKSNP++ CP C HVIDNSDV +WPGLPRGVKFDPSD EI+WHLLAK+GL GL+ HPFIDEFIPTV+QD GICYTHP+NLPGVK DG+ +HFF++AIKAYSTGTRKRRKI+ DDFG+VRWHKTGRTKPV+LDGVQ+GCKKIMVLY GGKA KTNWVMHQYHLG EEDEK+ +YV+SKIFYQQ Q K GDK EQ++ E A+ P DPVTPK TP+P R Sbjct: 1 MAGRSWLIDSNRIATKIMSASASSDPRQVVWKSNPSRHCPKCQHVIDNSDVVDDWPGLPRGVKFDPSDPEIIWHLLAKSGLSGLSSHPFIDEFIPTVNQDDGICYTHPKNLPGVKSDGTVSHFFHKAIKAYSTGTRKRRKIHDDDFGDVRWHKTGRTKPVVLDGVQRGCKKIMVLY-----GGKAVKTNWVMHQYHLGIEEDEKEGDYVVSKIFYQQPQQLVVKRGDKAEQEVSEDIFAAVTPTADPVTPKLATPEPRNAVR 257
BLAST of FC872252 vs. ExPASy Swiss-Prot
Match: NAC4_ARATH (NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13 Identity = 55/190 (28.95%), Postives = 88/190 (46.32%), Query Frame = 3 Query: 207 PRGVKFDPSDQEIVWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPG---VKQDGSAAHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQK---GCKKIMVLYMSMVRGGKAEKTNWVMHQYHLGTEEDEKDDNYVISKIFYQQQQAKYGDKIEQDILESTGAIIPKVD 758 P G +F P+D+EIV H L L+ H +DE I TVD IC P +LP +K +FF Y+ G ++RR+ N W KTG+T VM + G K+++V + KT+WVMH+YH + + Y + K+ ++ ++ + +E ++IP V+ Sbjct: 4 PVGFRFRPNDEEIVDHYLRPKNLDSDTSH--VDEVISTVD----ICSFEPWDLPSKSMIKSRDGVWYFFSVKEMKYNRGDQQRRRTNSGF-----WKKTGKTMTVMRKRGNREKIGEKRVLVF-----KNRDGSKTDWVMHEYHATSLFPNQMMTYTVCKVEFKGEETEISSSSTGSEIEQIHSLIPLVN 177 The following BLAST results are available for this feature:
BLAST of FC872252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872252 ID=FC872252; Name=FC872252; organism=Citrus clementina; type=EST; length=904bpback to top |