FC872313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872313 vs. ExPASy Swiss-Prot
Match: AB2A_ARATH (ABC transporter A family member 2 OS=Arabidopsis thaliana GN=ABCA2 PE=2 SV=1) HSP 1 Score: 416.001 bits (1068), Expect = 1.499e-115 Identity = 213/303 (70.30%), Postives = 249/303 (82.18%), Query Frame = 1 Query: 4 VRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELETAAAEGRLVTLNLTSGASVEIPPGARFVGIPGMESAENPRGIMVEVYWEQDDTGALCISGHSPEKPIPPHVELDASSASTSRG-NLFGQTG--PVHGIVIDP 903 +RAGSYSGGMKRRLSVA++LIGDPKLV LDEPTTGMDPITRRHVWDIIQ+ KKGRAIILTTHSMEEADILSDRI IMAKGRLRCIGTSIRLKS+FGTGFI ++F SNN NG E S + VK+FF+ HL V P EENKAF+T+VIPHD+E +L FF ELQDRE+E GI+DIQ+ L TLE+VFLNIA++AELE+AA +G +VTL+LTSG+SVEIP GARF+GIPG E+AENPRG+MVEVYW+QD++G+LCISGHS E PIP ++ + A G NL G+ G V GIVIDP Sbjct: 660 IRAGSYSGGMKRRLSVAVSLIGDPKLVFLDEPTTGMDPITRRHVWDIIQETKKGRAIILTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFIANISFVESNNH----NG--EAGSDSREPVKKFFKDHLKVKPIEENKAFMTFVIPHDKENLLTSFFAELQDREEEFGISDIQLGLATLEEVFLNIARKAELESAAVDGTMVTLDLTSGSSVEIPVGARFIGIPGTETAENPRGVMVEVYWQQDESGSLCISGHSTEMPIPENIPVTDPVAPGHGGVNLLGRRGRRQVQGIVIDP 956
BLAST of FC872313 vs. ExPASy Swiss-Prot
Match: AB11A_ARATH (ABC transporter A family member 11 OS=Arabidopsis thaliana GN=ABCA11 PE=3 SV=1) HSP 1 Score: 394.045 bits (1011), Expect = 6.101e-109 Identity = 202/300 (67.33%), Postives = 240/300 (80.00%), Query Frame = 1 Query: 4 VRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVA-SPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELETAAAEGRLVTLNLTSGASVEIPPGARFVGIPGMESAENPRGIMVEVYWEQDDTGALCISGHSPEKPIPPHVELDASSASTSRGNLFGQTGPVHGIVID 900 VRAGSYSGGMKRRLSVA+ALIGDPKLV LDEPTTGMDPITRRHVWDIIQ++KKGRAIILTTHSMEEADILSDRI IMAKGRLRCIGTSIRLKS+FGTGF+ TV+F + N D+ + H+ +K+FF+ HL V P EENKAF+T+VIPHD+E +L FF ELQ+RE E GI+DIQ+ L TLE+VFLNIA+QAELE+A AEG +VTL L SG S+EIP GARFVGIP E+AENP G+MVEVYW+QD +G++CISGHS E +P +V + + + G+ + G V GIVID Sbjct: 661 VRAGSYSGGMKRRLSVAVALIGDPKLVFLDEPTTGMDPITRRHVWDIIQESKKGRAIILTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFVATVSFIENKN-------DNNIGVGASHEPLKKFFKEHLKVEPTEENKAFMTFVIPHDKENLLTGFFEELQNRESEFGISDIQLGLATLEEVFLNIARQAELESATAEGNMVTLELASGISLEIPVGARFVGIPDTENAENPSGVMVEVYWQQDGSGSMCISGHSSEMRVPQNVPVTRPPSPNALGHKSLRQG-VRGIVID 952
BLAST of FC872313 vs. ExPASy Swiss-Prot
Match: AB9A_ARATH (ABC transporter A family member 9 OS=Arabidopsis thaliana GN=ABCA9 PE=3 SV=1) HSP 1 Score: 393.66 bits (1010), Expect = 7.968e-109 Identity = 205/299 (68.56%), Postives = 238/299 (79.60%), Query Frame = 1 Query: 4 VRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELETAAAEGRLVTLNLTSGASVEIPPGARFVGIPGMESAENPRGIMVEVYWEQDDTGALCISGHSPEKPIPPHVELDASSASTSRGNLFGQTGPVHGIVID 900 +RAGSYSGGMKRRLSVAIALIGDPKLV LDEPTTGMDPITRRHVWDIIQ++KKGRAIILTTHSMEEADILSDRI IMAKGRLRCIGTSIRLKS+FGTGF+ TV+F + +P + +K+FF+ L V P EENKAF+T+VIPHD+E +LK FF ELQDRE E GIADIQ+ L TLE+VFLNIA++AELE+A EG +VTL L SG +VEIP GARFVGIPG E+AENPRG+MVEVYW+QD +G++CISGHS E IP +V + +S G+ GQ V GIVID Sbjct: 662 IRAGSYSGGMKRRLSVAIALIGDPKLVFLDEPTTGMDPITRRHVWDIIQESKKGRAIILTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFVATVSFIENKKDGAP------------EPLKRFFKERLKVEPTEENKAFMTFVIPHDKEQLLKGFFAELQDRESEFGIADIQLGLATLEEVFLNIARRAELESATVEGTMVTLELESGIAVEIPVGARFVGIPGTENAENPRGLMVEVYWQQDGSGSMCISGHSAEMRIPENVSVIYEPSSQVLGH--GQR-RVRGIVID 945
BLAST of FC872313 vs. ExPASy Swiss-Prot
Match: ABCA3_HUMAN (ATP-binding cassette sub-family A member 3 OS=Homo sapiens GN=ABCA3 PE=1 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 2.141e-37 Identity = 84/198 (42.42%), Postives = 123/198 (62.12%), Query Frame = 1 Query: 7 RAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPH--HDAVKQFFETHLDVLPKEENK-AFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAK 591 R+ SGGM+R+LS+ IALI K++ILDEPT+GMD I+RR +WD++Q K R I+LTTH M+EAD+L DRIAIMAKG L+C G+S+ LK K+G G+ +T+ V PH + + Q H+ E + A L++++P + + F +L+ ++KELGIA S+TT+E+VFL + K Sbjct: 661 RSRFLSGGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWDLLQRQKSDRTIVLTTHFMDEADLLGDRIAIMAKGELQCCGSSLFLKQKYGAGYHMTL-----------------VKEPHCNPEDISQLVHHHVPNATLESSAGAELSFILPRESTHRFEGLFAKLEKKQKELGIASFGASITTMEEVFLRVGK 841 HSP 2 Score: 130.183 bits (326), Expect = 1.643e-29 Identity = 76/193 (39.38%), Postives = 117/193 (60.62%), Query Frame = 1 Query: 16 SYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKK-GRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFE-THLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIA 588 +YSGG KR+LS IALIG+P ++ LDEP+TGMDP+ RR +WD + A++ G+AII+T+HSMEE + L R+AIM +G+ +C+G+ LKSKFG+G+ S + G E + K F + T + ++E++ + Y +P R+ K F L+ +++ G+ D VS +LE VFL+ A Sbjct: 1514 TYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGKAIIITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGY--------SLRAKVQSEGQQEAL----EEFKAFVDLTFPGSVLEDEHQGMVHYHLP-GRDLSWAKVFGILEKAKEKYGVDDYSVSQISLEQVFLSFA 1693
BLAST of FC872313 vs. ExPASy Swiss-Prot
Match: ABCA3_MOUSE (ATP-binding cassette sub-family A member 3 OS=Mus musculus GN=Abca3 PE=2 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 4.770e-37 Identity = 80/199 (40.20%), Postives = 124/199 (62.31%), Query Frame = 1 Query: 4 VRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPH--HDAVKQFFETHL-DVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAK 591 +R+ SGGMKR+LS+ IALI K+++LDEPT GMD ++RR +WD++Q K R ++LTTH M+EAD+L DRIAI+AKG L+C G+S+ LK K+G G+ +T+ V PH + + Q H+ + + + A L++++P + + F +L+ ++KELGIA S+TT+E+VFL + K Sbjct: 660 LRSKFLSGGMKRKLSIGIALIAGSKVLMLDEPTPGMDAVSRRAIWDLLQQQKSDRTVLLTTHFMDEADLLGDRIAILAKGELQCCGSSLFLKQKYGAGYHMTL-----------------VKEPHCNPEGISQLVHHHVPNAMLESHAGAELSFILPKESTHRFESLFAKLEKKQKELGIASFGASVTTMEEVFLRVGK 841 HSP 2 Score: 126.331 bits (316), Expect = 2.373e-28 Identity = 72/197 (36.55%), Postives = 118/197 (59.90%), Query Frame = 1 Query: 16 SYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKK-GRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDV-----LPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIA 588 +YSGG KR+LS IALIG+P ++ LDEP+TGMDP+ RR +WD + A++ G+AI++T+HSMEE + L R+AIM +G+ +C+G+ LKSKFG+G+ + DA+++ F+ +D+ + ++E++ + Y +P + K F L+ +++ G+ D VS +LE VFL+ A Sbjct: 1514 TYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGKAIVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLQAKVRSEGK---------------QDALEE-FKAFVDLTFPGSILEDEHQDMVHYHLP-GCDLSWAKVFGILEKAKEKYGVDDYSVSQISLEQVFLSFA 1693
BLAST of FC872313 vs. ExPASy Swiss-Prot
Match: ABCA1_HUMAN (ATP-binding cassette sub-family A member 1 OS=Homo sapiens GN=ABCA1 PE=1 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 1.063e-36 Identity = 84/195 (43.08%), Postives = 118/195 (60.51%), Query Frame = 1 Query: 10 AGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDI-IQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAK 591 AG+YSGG KR+LS A+ALIG P +V LDEPTTGMDP RR +W+ + K+GR+++LT+HSMEE + L R+AIM GR RC+G+ LK++FG G+ + V GSN P+ +A P +PKE+++ L Y +P ++ + F + L +K L I D VS TTL+ VF+N AK Sbjct: 2042 AGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQDFFGLAFP-------------GSVPKEKHRNMLQYQLPSSLSSLARIFSI-LSQSKKRLHIEDYSVSQTTLDQVFVNFAK 2222 HSP 2 Score: 153.68 bits (387), Expect = 1.388e-36 Identity = 84/238 (35.29%), Postives = 138/238 (57.98%), Query Frame = 1 Query: 7 RAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIV-------------------TVNFTGSNNGQSPLNGDHEVASPHH--------DAVKQFFETHLDVLPKEENKAF-LTYVIPHD--REAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELETAAAEGRL 630 + SGGM+R+LSVA+A +G K+VILDEPT G+DP +RR +W+++ ++GR IIL+TH M+EAD+L DRIAI++ G+L C+G+S+ LK++ GTG+ + TV++ + S + D + S H A+ H+ E+ LTYV+P++ +E + F E+ DR +LGI+ +S TTLE++FL +A+++ ++ ++G L Sbjct: 1029 KTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAETSDGTL 1266
BLAST of FC872313 vs. ExPASy Swiss-Prot
Match: ABCA1_MOUSE (ATP-binding cassette sub-family A member 1 OS=Mus musculus GN=Abca1 PE=1 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 1.388e-36 Identity = 85/238 (35.71%), Postives = 139/238 (58.40%), Query Frame = 1 Query: 7 RAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTV-------------------------NFTGSNNGQSPLNGDHEVASPHHD--AVKQFFETHLDVLPKEENKAF-LTYVIPHD--REAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELETAAAEGRL 630 + SGGM+R+LSVA+A +G K+VILDEPT G+DP +RR +W+++ ++GR IIL+TH M+EADIL DRIAI++ G+L C+G+S+ LK++ GTG+ +T+ + ++ + L DHE + D A+ H+ E+ LTYV+P++ +E + F E+ DR +LGI+ +S TTLE++FL +A+++ ++ ++G L Sbjct: 1029 KTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSCLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAETSDGTL 1266 HSP 2 Score: 147.517 bits (371), Expect = 9.946e-35 Identity = 82/195 (42.05%), Postives = 116/195 (59.49%), Query Frame = 1 Query: 10 AGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDI-IQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAK 591 A +YSGG KR+LS A+ALIG P +V LDEPTTGMDP RR +W+ + K+GR+++LT+HSMEE + L R+AIM GR RC+G+ LK++FG G+ + V GSN P+ +A P + KE+++ L Y +P ++ + F + L +K L I D VS TTL+ VF+N AK Sbjct: 2042 ASNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFGLAFP-------------GSVLKEKHRNMLQYQLPSSLSSLARIFSI-LSQSKKRLHIEDYSVSQTTLDQVFVNFAK 2222
BLAST of FC872313 vs. ExPASy Swiss-Prot
Match: ABCA2_RAT (ATP-binding cassette sub-family A member 2 OS=Rattus norvegicus GN=Abca2 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.617e-35 Identity = 87/211 (41.23%), Postives = 123/211 (58.29%), Query Frame = 1 Query: 10 AGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQD-AKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELETAAAEGRLVTL 639 AGSYSGG KR+LS AIALIG P + LDEPTTGMDP RR +W++I D K GR+++LT+HSMEE + + R+AIM GRLRC+G+ LK++FG G+++TV S N + D V+ F + + KE + + Y + + + L + F +++ LGI D VS TTL++VF+N AK+ E TL Sbjct: 2184 AGSYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSHSMEECEAVCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKSSQNVK--------------DVVRFFNRNFPEAMLKERHHTKVQYQLKSEHIS-LAQVFSKMEHVVGVLGIEDYSVSQTTLDNVFVNFAKKQSDNVEQQEAEPSTL 2379 HSP 2 Score: 136.732 bits (343), Expect = 1.756e-31 Identity = 77/211 (36.49%), Postives = 127/211 (60.19%), Query Frame = 1 Query: 22 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNG-------QSPLNGDHEVASPHHDAVKQFFETHL-DVLPKEENKAFLTYVIPHD--REAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAE-LETAAAE 621 SGGMKR+LSVAIA +G + +ILDEPT G+DP RR +WD+I K GR I+L+TH M+EAD+L DRIAI++ G+L+C G+ + LK +G G+ +T+ + G S +G ++++ V QF H+ L + L+Y++P + ++ ++ F +L+ L ++ + TTLE+VFL ++++ + LE + A+ Sbjct: 1124 SGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGAYGDGYRLTLVKRPAEPGTSQEPGMASSPSGRPQLSNCSEMQVSQFIRKHVASSLLVSDTSTELSYILPSEAVKKGAFERLFQQLEHSLDALHLSSFGLMDTTLEEVFLKVSEEDQSLENSEAD 1334
BLAST of FC872313 vs. ExPASy Swiss-Prot
Match: ABCA2_MOUSE (ATP-binding cassette sub-family A member 2 OS=Mus musculus GN=Abca2 PE=1 SV=4) HSP 1 Score: 149.443 bits (376), Expect = 2.617e-35 Identity = 84/196 (42.86%), Postives = 120/196 (61.22%), Query Frame = 1 Query: 10 AGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQD-AKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQ 594 AG+YSGG KR+LS AIALIG P + LDEPTTGMDP RR +W++I D K GR+++LT+HSMEE + L R+AIM GRLRC+G+ LK++FG G+++TV S N + D V+ F + + KE + + Y + + + L + F +++ LGI D VS TTL++VF+N AK+ Sbjct: 2184 AGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKSSQNVK--------------DVVRFFNRNFPEAMLKERHHTKVQYQLKSEHIS-LAQVFSKMEQVVGVLGIEDYSVSQTTLDNVFVNFAKK 2364 HSP 2 Score: 137.887 bits (346), Expect = 7.881e-32 Identity = 80/223 (35.87%), Postives = 131/223 (58.74%), Query Frame = 1 Query: 22 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNG-------QSPLNGDHEVASPHHDAVKQFFETHL-DVLPKEENKAFLTYVIPHD--REAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAE-LETAAAEGRLVTLNLTSGA 657 SGGMKR+LSVAIA +G + +ILDEPT G+DP RR +WD+I K GR I+L+TH M+EAD+L DRIAI++ G+L+C G+ + LK +G G+ +T+ + G S +G ++S V QF H+ L + L+Y++P + ++ ++ F +L+ L ++ + TTLE+VFL ++++ + LE + A+ + ++ GA Sbjct: 1124 SGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGAYGDGYRLTLVKQPAEPGTSQEPGLASSPSGCPRLSSCSEPQVSQFIRKHVASSLLVSDTSTELSYILPSEAVKKGAFERLFQQLEHSLDALHLSSFGLMDTTLEEVFLKVSEEDQSLENSEADVKESRKDVLPGA 1346
BLAST of FC872313 vs. ExPASy Swiss-Prot
Match: ABCA2_HUMAN (ATP-binding cassette sub-family A member 2 OS=Homo sapiens GN=ABCA2 PE=1 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 5.831e-35 Identity = 83/196 (42.35%), Postives = 120/196 (61.22%), Query Frame = 1 Query: 10 AGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQD-AKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQ 594 AG+YSGG KR+LS AIALIG P + LDEPTTGMDP RR +W++I D K GR+++LT+HSMEE + L R+AIM GRLRC+G+ LK++FG G+++TV S + + D V+ F + + KE + + Y + + + L + F +++ LGI D VS TTL++VF+N AK+ Sbjct: 2183 AGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKSSQSVK--------------DVVRFFNRNFPEAMLKERHHTKVQYQLKSEHIS-LAQVFSKMEQVSGVLGIEDYSVSQTTLDNVFVNFAKK 2363 HSP 2 Score: 137.502 bits (345), Expect = 1.029e-31 Identity = 81/229 (35.37%), Postives = 131/229 (57.21%), Query Frame = 1 Query: 22 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTV-------------NFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHL-DVLPKEENKAFLTYVIPHD--REAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAE-LETAAAEGRLVTLNLTSGA 657 SGGMKR+LSVAIA +G + +ILDEPT G+DP RR +WD+I K GR I+L+TH M+EAD+L DRIAI++ G+L+C G+ + LK +G G+ +T+ S G++PL+ E+ V QF H+ L + L+Y++P + ++ ++ F L+ L ++ + TTLE+VFL ++++ + LE + A+ + ++ GA Sbjct: 1124 SGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGTYGDGYRLTLVKRPAEPGGPQEPGLASSPPGRAPLSSCSEL------QVSQFIRKHVASCLLVSDTSTELSYILPSEAAKKGAFERLFQHLERSLDALHLSSFGLMDTTLEEVFLKVSEEDQSLENSEADVKESRKDVLPGA 1346 The following BLAST results are available for this feature:
BLAST of FC872313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 107
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872313 ID=FC872313; Name=FC872313; organism=Citrus clementina; type=EST; length=918bpback to top |