FC872333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872333 vs. ExPASy Swiss-Prot
Match: KINB2_ARATH (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana GN=KINB2 PE=1 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 9.473e-47 Identity = 87/108 (80.56%), Postives = 100/108 (92.59%), Query Frame = 2 Query: 5 EYVPDDLESISSFEPPQSPETSYNNLQLTAEDFAKEPPLVPPHLQMTLLNVPASYMEIPPPLSRPQHVVLNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSMQR 328 +YVP+D++SIS FEPPQSPE SY+NL L AED++KEPP+VPPHLQMTLLN+PA+ +IP PL RPQHV+LNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKS+QR Sbjct: 182 DYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 289
BLAST of FC872333 vs. ExPASy Swiss-Prot
Match: KINB1_ARATH (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana GN=KINB1 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 54/107 (50.47%), Postives = 72/107 (67.29%), Query Frame = 2 Query: 8 YVPDDLESISSFEPPQSPETSYNNLQLTAEDFAKEPPLVPPHLQMTLLNVPASYMEIPPPLSRPQHVVLNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSMQR 328 +VP++ ESI FE P SP+ SY AED+AKEP VPP L +TLL E ++PQHVVLNH+++++G + S+VALG THRF +KY+TVVLYK + R Sbjct: 181 FVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLLGTT----EETAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283
BLAST of FC872333 vs. ExPASy Swiss-Prot
Match: AAKB1_MOUSE (5'-AMP-activated protein kinase subunit beta-1 OS=Mus musculus GN=Prkab1 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 39/99 (39.39%), Postives = 52/99 (52.53%), Query Frame = 2 Query: 20 DLESISSFEPPQSPETSYNNLQLTAEDFAKEPPLVPPHLQMTLLNVPASYMEIPPPLSRPQHVVLNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYK 316 D+ +SS P + Y + E+ K PP++PPHL +LN P L P HV+LNHLY K G V+ L +THR+ KYVT +LYK Sbjct: 175 DVSELSSSPPGPYHQEPYMS---KPEERFKAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDG--VMVLSATHRYKKKYVTTLLYK 268 The following BLAST results are available for this feature:
BLAST of FC872333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872333 ID=FC872333; Name=FC872333; organism=Citrus clementina; type=EST; length=697bpback to top |