FC872380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872380 vs. ExPASy Swiss-Prot
Match: PFD6_BOVIN (Prefoldin subunit 6 OS=Bos taurus GN=PFDN6 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.304e-23 Identity = 54/121 (44.63%), Postives = 83/121 (68.60%), Query Frame = 2 Query: 41 LQRELETKANDLSKLQKDIGKNHQVRKKYTIQLGENELVLKELGLLNEGANVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDATLQDLEEKQNSKKEAIFKVQQRIQSLQAGKAKA 403 +Q++L+ + +LQKD+ K+ R+K QL EN +V +EL LL+ V+KL+GPVLVKQ+L EA A V KR++YI+AE+KR ++ L+DLE++ ++E + ++QQ Q QA KA A Sbjct: 5 IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLDYITAEIKRYESQLRDLEQQSEQQRETLAQLQQEFQRAQAAKAGA 125
BLAST of FC872380 vs. ExPASy Swiss-Prot
Match: PFD6_HUMAN (Prefoldin subunit 6 OS=Homo sapiens GN=PFDN6 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.246e-22 Identity = 54/121 (44.63%), Postives = 82/121 (67.77%), Query Frame = 2 Query: 41 LQRELETKANDLSKLQKDIGKNHQVRKKYTIQLGENELVLKELGLLNEGANVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDATLQDLEEKQNSKKEAIFKVQQRIQSLQAGKAKA 403 +Q++L+ + +LQKD+ K+ R+K QL EN +V +EL LL+ V+KL+GPVLVKQ+L EA A V KR++YI+AE+KR ++ L+DLE + ++E + ++QQ Q QA KA A Sbjct: 5 IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKAGA 125
BLAST of FC872380 vs. ExPASy Swiss-Prot
Match: PFD6_CANFA (Prefoldin subunit 6 OS=Canis familiaris GN=PFDN6 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.246e-22 Identity = 54/121 (44.63%), Postives = 82/121 (67.77%), Query Frame = 2 Query: 41 LQRELETKANDLSKLQKDIGKNHQVRKKYTIQLGENELVLKELGLLNEGANVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDATLQDLEEKQNSKKEAIFKVQQRIQSLQAGKAKA 403 +Q++L+ + +LQKD+ K+ R+K QL EN +V +EL LL+ V+KL+GPVLVKQ+L EA A V KR++YI+AE+KR ++ L+DLE + ++E + ++QQ Q QA KA A Sbjct: 5 IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKAGA 125
BLAST of FC872380 vs. ExPASy Swiss-Prot
Match: PFD6_MOUSE (Prefoldin subunit 6 OS=Mus musculus GN=Pfdn6 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22 Identity = 53/119 (44.54%), Postives = 81/119 (68.07%), Query Frame = 2 Query: 41 LQRELETKANDLSKLQKDIGKNHQVRKKYTIQLGENELVLKELGLLNEGANVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDATLQDLEEKQNSKKEAIFKVQQRIQSLQAGKA 397 +Q++L+ + +LQKD+ K+ R+K QL EN +V +EL LL+ V+KL+GPVLVKQ+L EA A V KR++YI+AE+KR ++ L+DLE + ++E + ++QQ Q QA KA Sbjct: 5 IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKA 123
BLAST of FC872380 vs. ExPASy Swiss-Prot
Match: PFD6_DROME (Probable prefoldin subunit 6 OS=Drosophila melanogaster GN=CG7770 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16 Identity = 51/114 (44.74%), Postives = 68/114 (59.65%), Query Frame = 2 Query: 35 RELQRELETKANDLSKLQKDIGKNHQVRKKYTIQLGENELVLKELGLLNEGANVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDATLQDLEEKQNSKKEAIFKVQQRIQ 376 +++Q E+E+ N LQK K + R QL EN+ VL EL LL VYKL GPVLVKQ+L E+ NV KRIEYIS ELK L+++E+ +E++ K QQ+ Q Sbjct: 10 KKMQAEIESYQN----LQKSCLKMVKQRAVLESQLNENKCVLDELNLLGPDNKVYKLFGPVLVKQELEESRQNVGKRIEYISKELKSSTDALENMEKDMLKHRESVAKYQQQCQ 119
BLAST of FC872380 vs. ExPASy Swiss-Prot
Match: PFD6_CAEEL (Probable prefoldin subunit 6 OS=Caenorhabditis elegans GN=pfd-6 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16 Identity = 43/118 (36.44%), Postives = 73/118 (61.86%), Query Frame = 2 Query: 50 ELETKANDLSKLQKDIGKNHQVRKKYTIQLGENELVLKELGLLNEGANVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDATLQDLEEKQNSKKEAIFKVQQRIQSLQAGKAKA 403 + E + N L L+KD K R++ ++L E++ V EL L+ + VYKLIG VLV+QDL EA + V KR+E+I +E KR++A++ D+ +K +++ + +Q+ Q + A+A Sbjct: 6 KFEEEVNKLRTLEKDREKYFTSRQEMEMRLTESKNVKAELDLMESDSKVYKLIGAVLVRQDLEEARSTVEKRLEFIDSETKRVEASISDISKKCTEQRDKVMNMQKSFQMMAQAAAQA 123
BLAST of FC872380 vs. ExPASy Swiss-Prot
Match: PFD6_CAEBR (Probable prefoldin subunit 6 OS=Caenorhabditis briggsae GN=pfd-6 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15 Identity = 40/111 (36.04%), Postives = 73/111 (65.77%), Query Frame = 2 Query: 50 ELETKANDLSKLQKDIGKNHQVRKKYTIQLGENELVLKELGLLNEGANVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDATLQDLEEKQNSKKEAIFKVQQRIQSL 382 + E + + L L+KD K R++ ++L E++ V EL L++ + VYKL+GPVLV+QDL EA + V KR+E+I +E+KR++A++ D+ +K +++ + +Q+ Q + Sbjct: 6 KFEEEISKLKTLEKDREKYFSSRQEMEMRLTESKNVKAELDLMDSDSKVYKLMGPVLVRQDLEEARSTVEKRLEFIESEIKRVEASITDVNKKSIEQRDKVMNMQKAFQMM 116
BLAST of FC872380 vs. ExPASy Swiss-Prot
Match: PFD6_DICDI (Probable prefoldin subunit 6 OS=Dictyostelium discoideum GN=pfdn6 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.381e-13 Identity = 44/120 (36.67%), Postives = 70/120 (58.33%), Query Frame = 2 Query: 32 LRELQRELETKANDLSKLQK-DIGKNHQVRKKYTIQLGENELVLKELGLLNEGANVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDATLQDLEEKQNSKKEAIFKVQQRIQSLQA 388 ++++Q +L KA D ++ + ++ K R K QL ENE+V KE LL A +YKL GPVL KQ EA + R++ I+ LK ++ +D+E+K ++ IF+ Q +I+SL A Sbjct: 15 IQQIQDQL-IKARDAFQVHETELQKLSASRSKLLTQLNENEMVKKEFDLLESEAKIYKLNGPVLFKQTKEEAENTITSRLDIINNNLKTIETNFKDIEKKAMEQRNKIFEYQNKIRSLTA 133 The following BLAST results are available for this feature:
BLAST of FC872380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872380 ID=FC872380; Name=FC872380; organism=Citrus clementina; type=EST; length=699bpback to top |