FC872414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872414 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSJ (Protein IN2-1 homolog B OS=Oryza sativa subsp. japonica GN=GSTZ5 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.964e-20 Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 2 Query: 5 KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQ 145 KGD +A A D +E AL KF+DGPFFLGQFS VDIAY+PF+ERFQ Sbjct: 146 KGDVCDEAVAALDKIEAALSKFNDGPFFLGQFSLVDIAYVPFIERFQ 192 HSP 2 Score: 50.8322 bits (120), Expect = 1.964e-20 Identity = 25/49 (51.02%), Postives = 32/49 (65.31%), Query Frame = 3 Query: 144 RIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKELVEFYRSR 290 +IF S YDIT GRP L +IEE+NK+ AY TK DP+ L+E + R Sbjct: 192 QIFFSGIKNYDITKGRPNLQKFIEEVNKIHAYTETKQDPQFLLEHTKKR 240
BLAST of FC872414 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSI (Protein IN2-1 homolog B OS=Oryza sativa subsp. indica GN=GSTZ5 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.964e-20 Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 2 Query: 5 KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQ 145 KGD +A A D +E AL KF+DGPFFLGQFS VDIAY+PF+ERFQ Sbjct: 146 KGDVCDEAVAALDKIEAALSKFNDGPFFLGQFSLVDIAYVPFIERFQ 192 HSP 2 Score: 50.8322 bits (120), Expect = 1.964e-20 Identity = 25/49 (51.02%), Postives = 32/49 (65.31%), Query Frame = 3 Query: 144 RIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKELVEFYRSR 290 +IF S YDIT GRP L +IEE+NK+ AY TK DP+ L+E + R Sbjct: 192 QIFFSGIKNYDITKGRPNLQKFIEEVNKIHAYTETKQDPQFLLEHTKKR 240
BLAST of FC872414 vs. ExPASy Swiss-Prot
Match: IN21A_ORYSJ (Protein IN2-1 homolog A OS=Oryza sativa subsp. japonica GN=Os03g0283200 PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 1.210e-15 Identity = 27/47 (57.45%), Postives = 32/47 (68.09%), Query Frame = 2 Query: 5 KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQ 145 K D + + A D +E AL KF DGPFFLGQFS VDIAY+ +ER Q Sbjct: 145 KADLSAETVAALDKIEAALSKFGDGPFFLGQFSLVDIAYVTIIERIQ 191 HSP 2 Score: 46.9802 bits (110), Expect = 1.210e-15 Identity = 21/48 (43.75%), Postives = 33/48 (68.75%), Query Frame = 3 Query: 144 RIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKELVEFYRS 287 +I+ S KY+IT GRP L +IEE+N+++AY TK DP L++ ++ Sbjct: 191 QIYYSHIRKYEITNGRPNLEKFIEEINRIEAYTQTKNDPLYLLDLAKT 238
BLAST of FC872414 vs. ExPASy Swiss-Prot
Match: IN21_MAIZE (Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 2.806e-14 Identity = 24/37 (64.86%), Postives = 27/37 (72.97%), Query Frame = 2 Query: 35 AFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQ 145 A D LE L KFDDGPFFLGQFS D+AY+ +ER Q Sbjct: 155 ALDKLEADLSKFDDGPFFLGQFSLADVAYVTILERVQ 191 HSP 2 Score: 46.595 bits (109), Expect = 2.806e-14 Identity = 22/53 (41.51%), Postives = 33/53 (62.26%), Query Frame = 3 Query: 129 LLRDSRIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKELVEFYRS 287 +L +I+ S YDI GRP L +I+E+NK++AY TK DP L++ +S Sbjct: 186 ILERVQIYYSHLRNYDIAQGRPNLQEFIDEMNKIEAYAQTKNDPLFLLDLAKS 238 The following BLAST results are available for this feature:
BLAST of FC872414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872414 ID=FC872414; Name=FC872414; organism=Citrus clementina; type=EST; length=667bpback to top |