FC872433
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872433 vs. ExPASy Swiss-Prot
Match: MCCB_HUMAN (Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Homo sapiens GN=MCCC2 PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.500e-71 Identity = 77/113 (68.14%), Postives = 91/113 (80.53%), Query Frame = 2 Query: 26 PRESIDRLTDPGSSSLELSQLAGHELYE-VTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIF 361 PRE ID L DPGS LELSQ AG++LY+ + GGIITGIG V G CM +AND TVKGG Y+P+T+KK LRAQEIA Q +LPCIYLVDSGGAYLP+QA+VFPD+++FGR F Sbjct: 83 PRERIDNLIDPGSPFLELSQFAGYQLYDNEEVPGGGIITGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPRQADVFPDRDHFGRTF 195 HSP 2 Score: 130.568 bits (327), Expect = 2.500e-71 Identity = 63/95 (66.32%), Postives = 77/95 (81.05%), Query Frame = 3 Query: 339 RKILGEFFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQDELH 623 R G FYNQAIMS++ I QIA+V+GSCTAGGAY+PAMADE+++V+ GTIFLAGPPLVKAATGEE LGGA +HC+ SGVSD++A D+ H Sbjct: 188 RDHFGRTFYNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMADENIIVRKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHH 282
BLAST of FC872433 vs. ExPASy Swiss-Prot
Match: MCCB_ARATH (Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Arabidopsis thaliana GN=MCCB PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 9.999e-55 Identity = 114/179 (63.69%), Postives = 122/179 (68.16%), Query Frame = 2 Query: 26 PRESIDRLTDPGSSSLELSQLAGHELYEVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFL*SSHNVS*RHPSNCISTGFLHCWRCLYSCNG**KCYGKRKWYHFSGRTPPCKGCYRRGISAEDFGG 562 PRE IDRL DPGSS LELSQLAGHELYE L SGGIITGIGP+HGR+CMF+ANDPTVKGGTY+PITIKKHLRAQEIAA+C+LPCIYLVDSGGAYLPKQAEVFPDKENFGR+F S S P I G K F P K +SAED GG Sbjct: 102 PRERIDRLLDPGSSFLELSQLAGHELYEEPLPSGGIITGIGPIHGRICMFMANDPTVKGGTYYPITIKKHLRAQEIAARCRLPCIYLVDSGGAYLPKQAEVFPDKENFGRVFYNESVMSSDGIPQIAIVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGG 280 HSP 2 Score: 159.073 bits (401), Expect = 1.714e-38 Identity = 77/105 (73.33%), Postives = 87/105 (82.86%), Query Frame = 3 Query: 312 PSRLKYSLTRKILGEFFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQDELHG 626 P + + ++ G FYN+++MS++GIPQIA+VLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEE LGGA VHC SGVSDYFAQDELHG Sbjct: 197 PKQAEVFPDKENFGRVFYNESVMSSDGIPQIAIVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGATVHCTVSGVSDYFAQDELHG 301
BLAST of FC872433 vs. ExPASy Swiss-Prot
Match: MCCB_RAT (Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus GN=Mccc2 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.238e-38 Identity = 77/113 (68.14%), Postives = 92/113 (81.42%), Query Frame = 2 Query: 26 PRESIDRLTDPGSSSLELSQLAGHELY-EVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIF 361 PR+ ID L DPGS LE SQ AG++LY E + +GGIITGIG V G CM VAND TVKGGTY+P+T+KKH+RAQEIA Q +LPCIYLVDSGGA LP+QA+ FPD+++FGRIF Sbjct: 83 PRDRIDNLIDPGSPFLEFSQFAGYKLYGEEEVPAGGIITGIGRVSGVECMIVANDATVKGGTYYPVTVKKHVRAQEIALQNRLPCIYLVDSGGANLPRQADTFPDRDHFGRIF 195 HSP 2 Score: 131.339 bits (329), Expect = 3.826e-30 Identity = 65/106 (61.32%), Postives = 81/106 (76.42%), Query Frame = 3 Query: 306 TFPSRLKYSLTRKILGEFFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQDELH 623 TFP R + G FYNQAIMS++ I QIA+V+GSCTAGGAY+PAMADE+++V+ GTIFLAGPPLVKAATGEE LGGA +HC+ SGV+D++A D+ H Sbjct: 184 TFPDRDHF-------GRIFYNQAIMSSKNITQIAVVMGSCTAGGAYVPAMADENIIVQRQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRRSGVTDHYALDDHH 282
BLAST of FC872433 vs. ExPASy Swiss-Prot
Match: MCCB_MOUSE (Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Mus musculus GN=Mccc2 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.817e-38 Identity = 76/113 (67.26%), Postives = 92/113 (81.42%), Query Frame = 2 Query: 26 PRESIDRLTDPGSSSLELSQLAGHELY-EVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIF 361 PR+ ID L DPGS LE SQ AG++LY + + +GGIITGIG V G CM VAND TVKGGTY+P+T+KKH+RAQEIA Q +LPCIYLVDSGGA LP+QA+ FPD+++FGRIF Sbjct: 83 PRDRIDNLIDPGSPFLEFSQFAGYQLYGDEEVPAGGIITGIGRVSGVECMIVANDATVKGGTYYPVTVKKHVRAQEIALQNRLPCIYLVDSGGANLPRQADTFPDRDHFGRIF 195 HSP 2 Score: 131.339 bits (329), Expect = 3.826e-30 Identity = 65/106 (61.32%), Postives = 81/106 (76.42%), Query Frame = 3 Query: 306 TFPSRLKYSLTRKILGEFFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQDELH 623 TFP R + G FYNQAIMS++ I QIA+V+GSCTAGGAY+PAMADE+++V+ GTIFLAGPPLVKAATGEE LGGA +HC+ SGV+D++A D+ H Sbjct: 184 TFPDRDHF-------GRIFYNQAIMSSKNITQIAVVMGSCTAGGAYVPAMADENIIVQKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVTDHYALDDHH 282
BLAST of FC872433 vs. ExPASy Swiss-Prot
Match: MCCB_DROME (Probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Drosophila melanogaster GN=L(2)04524 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.986e-38 Identity = 90/179 (50.28%), Postives = 110/179 (61.45%), Query Frame = 2 Query: 29 RESIDRLTDPGSSSLELSQLAGHELY-EVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFL*SSHNVS*RHPSNCISTGFLHCWRCLYSCNG**KCYGKRKWYHFSGRTPPCKGCYRRGISAEDFGG 562 RE I+ L D GS LELS LAGHELY E + SGGI+TG+G V G C+ VAND TVKGG+Y+PIT+KKHLRAQEIA + +LPCIYLVDSGGA LP+QA+VFPDK +FGRIF ++ + P + G K++ F P K +SAED GG Sbjct: 83 RERINLLLDKGSPFLELSALAGHELYGEEVVNSGGIVTGVGRVCGTECLVVANDATVKGGSYYPITVKKHLRAQEIAQENRLPCIYLVDSGGANLPRQADVFPDKLHFGRIFYNQANMSAQGIPQIAVVMGSCTAGGAYVPAMADESIIVKKQGTIFLAGPPLVKAATGEEVSAEDLGG 261 HSP 2 Score: 141.739 bits (356), Expect = 2.831e-33 Identity = 70/105 (66.67%), Postives = 83/105 (79.05%), Query Frame = 3 Query: 309 FPSRLKYSLTRKILGEFFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQDELH 623 FP +L + G FYNQA MSA+GIPQIA+V+GSCTAGGAY+PAMADES++VK GTIFLAGPPLVKAATGEE LGGA +HCKTSGV+D++A D+ H Sbjct: 184 FPDKLHF-------GRIFYNQANMSAQGIPQIAVVMGSCTAGGAYVPAMADESIIVKKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCKTSGVTDHYALDDEH 281
BLAST of FC872433 vs. ExPASy Swiss-Prot
Match: MCCB_CAEEL (Probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Caenorhabditis elegans GN=F02A9.4 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.474e-37 Identity = 88/179 (49.16%), Postives = 109/179 (60.89%), Query Frame = 2 Query: 29 RESIDRLTDPGSSSLELSQLAGHELY-EVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFL*SSHNVS*RHPSNCISTGFLHCWRCLYSCNG**KCYGKRKWYHFSGRTPPCKGCYRRGISAEDFGG 562 RE ID + D GS +E SQLAG+E+Y + + SGGI+TG+G V GR+C+ VAND TVKGGTY+PIT+KKHLRAQEIA + KLPCIYLVDSGGA LP+QA++F D ++FGRIF + S P + G K F G P K ISAE+ GG Sbjct: 129 RERIDGIVDAGSPFIEFSQLAGYEMYGKEEVPSGGILTGVGIVSGRVCVIVANDATVKGGTYYPITVKKHLRAQEIARENKLPCIYLVDSGGANLPRQADIFADSQHFGRIFYNQATMSSEGIPQLAVVMGSCTAGGAYVPAMSDQAIIVKGTGTVFLGGPPLVKAATGEEISAEELGG 307 HSP 2 Score: 134.42 bits (337), Expect = 4.520e-31 Identity = 60/91 (65.93%), Postives = 76/91 (83.52%), Query Frame = 3 Query: 351 GEFFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQDELH 623 G FYNQA MS+EGIPQ+A+V+GSCTAGGAY+PAM+D++++VKG GT+FL GPPLVKAATGEE LGGA +HC SGV+DY+A ++ H Sbjct: 237 GRIFYNQATMSSEGIPQLAVVMGSCTAGGAYVPAMSDQAIIVKGTGTVFLGGPPLVKAATGEEISAEELGGADLHCGESGVTDYYAHNDKH 327
BLAST of FC872433 vs. ExPASy Swiss-Prot
Match: MCCB_DICDI (Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Dictyostelium discoideum GN=mccb PE=3 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 7.199e-37 Identity = 79/131 (60.31%), Postives = 97/131 (74.05%), Query Frame = 2 Query: 29 RESIDRLTDPGSSSLELSQLAGHELY-EVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFL*SSHNVS*RHPSNCISTG 418 RE I+ L D GS LE SQLAG +Y + + +GGIITGIG +HG C+ VAND TVKGGTYFPIT+KKHLRAQEIA + LPCIYLVDSGGA LP+QA+VFPD+++FGRIF ++ + R P + G Sbjct: 107 RERIEALIDVGSPFLEFSQLAGWGMYGKEEVAAGGIITGIGKIHGVECVIVANDSTVKGGTYFPITVKKHLRAQEIAQENNLPCIYLVDSGGANLPRQADVFPDRDHFGRIFFNQANMSAKRIPQIAVVMG 237 HSP 2 Score: 133.265 bits (334), Expect = 1.007e-30 Identity = 64/93 (68.82%), Postives = 77/93 (82.80%), Query Frame = 3 Query: 339 RKILGEFFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQDE 617 R G F+NQA MSA+ IPQIA+V+GSCTAGGAY+PAMADESV+VKG GTIFL GPPLVKAATGE LGGA +HC+TSGV+D++A+D+ Sbjct: 211 RDHFGRIFFNQANMSAKRIPQIAVVMGSCTAGGAYVPAMADESVIVKGTGTIFLGGPPLVKAATGEIVTSEELGGADLHCRTSGVTDHYARDD 303
BLAST of FC872433 vs. ExPASy Swiss-Prot
Match: PCCB_SACEN (Propionyl-CoA carboxylase beta chain OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=pccB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.695e-19 Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 3 Query: 393 IPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQDE 617 IPQI+L++G C G Y PA+ D +VMV +F+ GP ++K TGE+ LGGA H + SG + Y A DE Sbjct: 177 IPQISLIMGPCAGGAVYSPAITDFTVMVDQTSHMFITGPDVIKTVTGEDVSFEDLGGARTHNERSGNAHYLATDE 251 HSP 2 Score: 46.2098 bits (108), Expect = 1.695e-19 Identity = 32/97 (32.99%), Postives = 49/97 (50.52%), Query Frame = 2 Query: 29 RESIDRLTDPGSSSLELSQLAGHELYEVTLQSG-----GIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGA 304 RE ID L D GS +EL + A H + + G++TG G V GR + D TV GG+ + +K ++ ++A + P + + DSGGA Sbjct: 56 RERIDMLLDEGSF-VELDEHARHRSTNFGMDADRPYGDGVVTGWGTVDGRRVCVFSQDFTVFGGSLGEVFGEKIVKVMDLAMKTGCPLVGINDSGGA 151
BLAST of FC872433 vs. ExPASy Swiss-Prot
Match: PCCB_MYCLE (Probable propionyl-CoA carboxylase beta chain 5 OS=Mycobacterium leprae GN=accD5 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 3.962e-18 Identity = 32/85 (37.65%), Postives = 47/85 (55.29%), Query Frame = 3 Query: 363 YNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQDE 617 + I+++ IPQI+L++G+ G Y PA+ D VMV +F+ GP ++K TGE+ LGGA H SG + Y A E Sbjct: 171 FRNNILASGVIPQISLIMGAAAGGHVYSPALTDFVVMVDQTSQMFITGPDVIKTVTGEDVTMEELGGAHTHMAKSGTAHYVASGE 255 HSP 2 Score: 44.669 bits (104), Expect = 3.962e-18 Identity = 34/100 (34.00%), Postives = 48/100 (48.00%), Query Frame = 2 Query: 20 FSPRESIDRLTDPGSSSLELSQLAGHE-----LYEVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGA 304 F+ RE I L D S +EL LA H L E G++TG G + GR + D TV GG+ + +K ++ QE+A + P I + D GA Sbjct: 57 FTARERIYALLDD-DSFVELDALARHRSTNFGLGENRPVGDGVVTGYGTIDGRDVCIFSQDVTVFGGSLGEVYGEKIVKVQELAIKTGRPLIGINDGAGA 155
BLAST of FC872433 vs. ExPASy Swiss-Prot
Match: PCCB_BACSU (Putative propionyl-CoA carboxylase beta chain OS=Bacillus subtilis GN=yqjD PE=3 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 5.160e-18 Identity = 32/89 (35.96%), Postives = 47/89 (52.81%), Query Frame = 3 Query: 351 GEFFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQDE 617 G FY + S IPQI+++LG C G Y PA+ D M + G +F+ GP +++ TGE+ LGGA +H SG + + E Sbjct: 141 GHIFYRNVLYSGV-IPQISVILGPCAGGAVYSPALTDFIFMAEQTGRMFITGPKVIEKVTGEQVDAESLGGAGIHNAVSGNAHFSGHTE 228 HSP 2 Score: 45.0542 bits (105), Expect = 5.160e-18 Identity = 38/122 (31.15%), Postives = 55/122 (45.08%), Query Frame = 2 Query: 2 RKQVTSFSPRESIDRLTDPGSSSLELSQLAGHELY--EVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIF 361 ++Q + RE I L D S +EL ++ E + G++TG G + GR A D TV GG +K ++AA+ K P I L DSGGA + E + +G IF Sbjct: 27 QRQKGKLTARERIIFLLDQ-DSFIELHPFMESQVLTREQRMLGDGVVTGYGTIDGRSVYVFAQDFTVYGGALGETHARKICALMDLAAKNKAPIIGLNDSGGARI---QEGVLSLDGYGHIF 144 The following BLAST results are available for this feature:
BLAST of FC872433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872433 ID=FC872433; Name=FC872433; organism=Citrus clementina; type=EST; length=626bpback to top |