FC872466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872466 vs. ExPASy Swiss-Prot
Match: CYP37_ARATH (Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic OS=Arabidopsis thaliana GN=CYP37 PE=1 SV=3) HSP 1 Score: 416.387 bits (1069), Expect = 1.148e-115 Identity = 205/263 (77.95%), Postives = 232/263 (88.21%), Query Frame = 2 Query: 5 EKGSTLYASLIDGKGGLQALLKCIKDQDPDKVSVGLASSLDTVAELELLQAPGLSFLLPEQYKKYPRLTGRGIVELTIEKGDGSSFSPEAGGEPRKTATIQVVLDGYSAPLTAGNVAKLVIDGAYDGTRLNCTNQAVLTEKGLDKGSDYNLPLEIMPSGQFEPLYRTALNVQDGELPVLPLSVYGAVAMAHSEDSEEYSAPYQFFFYLYDKRNAGLGGLSFDEGQFSVFGYTTVGRDILPQIKTGDVIQSAKLMEGQDRLVLP 793 +KGS LY +LIDGKGGLQAL+ IK QDPDKVS+GLA+SLDTVA+LELLQA GLSFLLP+QY YPRL GRG VE+TIEK DGS+FS EAGG+ RK+AT+Q+V+DGYSAPLTAGN AKLV GAYDG +LN NQAV+TE G K ++PLE+MPSGQFEPLYRT L+VQDGELPVLPLSVYGAVAMAHSE+SEEYS+PYQFFFYLYDKRN+GLGGLSFDEGQFSVFGYT G+DIL QIKTGD+I+SAKL+EGQDRL LP Sbjct: 194 DKGSELYTTLIDGKGGLQALITSIKKQDPDKVSLGLAASLDTVADLELLQASGLSFLLPQQYLNYPRLAGRGTVEITIEKADGSTFSAEAGGDQRKSATVQIVIDGYSAPLTAGNFAKLVTSGAYDGAKLNTVNQAVITEDGSGKVESVSVPLEVMPSGQFEPLYRTPLSVQDGELPVLPLSVYGAVAMAHSENSEEYSSPYQFFFYLYDKRNSGLGGLSFDEGQFSVFGYTIAGKDILGQIKTGDIIKSAKLIEGQDRLSLP 456
BLAST of FC872466 vs. ExPASy Swiss-Prot
Match: PPI3_SYNY3 (Putative thylakoid lumen peptidyl-prolyl cis-trans isomerase sll0408 OS=Synechocystis sp. (strain PCC 6803) GN=sll0408 PE=3 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 1.065e-28 Identity = 89/276 (32.25%), Postives = 132/276 (47.83%), Query Frame = 2 Query: 8 KGSTLYASLIDGKGGLQALLKCIKDQDPDKVSVGLASSLDTVAELELLQAPGLSFLLPEQYKKYPRLTGRGIVELTIEKGDGSSFSPEAGGEPRKTATIQVVLDGYSAPLTAGNVAKLVIDGAYDGTRLNCTNQAVLTEKGLDKGSDYN-----------LPLEIMPSGQFEPLYRTALNVQDGELP--VLPLSVYGAVAMAHSEDSEEYSAPYQFFFYLYDKRNAGLGGLSFDEGQFSVFGYTTVGRDILPQIKTGDVIQSAKLMEGQDRLVLPN 796 + TL S+ K L AL + ++ +D ++V S+L + +LE L F +PE++ P+L GR VE+T KG + +V+DGYSAP+ AGN LV YDG + +T+ G G + +PLEI+ G+ P+Y L LP LP + YGA+A+A E +E QFFF+ +D G + +G++SVFGY G++ L Q+ GD I SAK++ G D LV N Sbjct: 125 EAETLLGSI---KTDLTALTEAVEAKDKEQVISFRKSALTAIGDLEALMVTDFPFAIPEEFANLPQLKGRATVEMTTNKGP-----------------LTIVVDGYSAPINAGNFVDLVQRKFYDGLPFIRSEDFFVTQAGDPPGPEAGFIDPQTKEYRAIPLEILVKGEEGPIYGMTLEDAGMYLPELALPFNAYGAIALARPE-TEPNGGSSQFFFFKFDTELTP-PGFNLMDGRYSVFGYVVDGKETLEQLSEGDKIVSAKVISGADNLVNGN 378
BLAST of FC872466 vs. ExPASy Swiss-Prot
Match: CYP38_ARATH (Peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic OS=Arabidopsis thaliana GN=CYP38 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.760e-23 Identity = 78/264 (29.55%), Postives = 131/264 (49.62%), Query Frame = 2 Query: 44 KGGLQALLKCIKDQDPDKVSVGLASSLDTVAELELLQAPGLSFLLPEQYKKYPRLTGRGIVELTIEKGDGSSFSPEAGGEPRKTATIQVVLDGYSAPLTAGNVAKLVIDGAYDGTRLNCTNQAVL--------TEKGLDKGSDYN--LPLEIMPSGQFEPLYRTALN---VQDGELPVLPLSVYGAVAMAHSEDSEEYSAPYQFFFYLYDKRNAGLGGLSFDEGQFSVFGYTTVGRDILPQIKTGDVIQSAKLMEGQDRLVLPN 796 + G+Q +LK ++D+ D V+ L V +E G + +PE+Y+ P L GR V++ ++ D + + ++VLDGY+AP+TAGN LV YDG + ++ V+ E +D ++ +PLEIM +G+ P Y + L + ++ V+P + +G +AMA E+ E S Q F+ L + D G+++VFGY T D L +K GDVI+S +++ G + L P+ Sbjct: 181 EAGMQDMLKIVEDRKRDAVAPKQKEILKYVGGIEEDMVDGFPYEVPEEYRNMPLLKGRASVDMKVKIKDNPNI---------EDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRSDGFVVQTGDPEGPAEGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQV-VIPFNAFGTMAMAR-EEFENDSGSSQVFWLLKESELTPSNSNILD-GRYAVFGYVTDNEDFLADLKVGDVIESIQVVSGLENLANPS 432
BLAST of FC872466 vs. ExPASy Swiss-Prot
Match: TLP40_SPIOL (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Spinacia oleracea GN=TLP40 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.141e-22 Identity = 84/279 (30.11%), Postives = 133/279 (47.67%), Query Frame = 2 Query: 5 EKGSTLYASLIDGKGGLQALLKCIKDQDPDKVSVGLASSLDTVAELELLQAPGLSFLLPEQYKKYPRLTGRGIVELTIEKGDGSSFSPEAGGEPRKTATIQVVLDGYSAPLTAGNVAKLVIDGAYDGTRLNCTNQAVL--------TEKGLDKGSDY--NLPLEIMPSGQFEPLYRTALNVQDGELPV------LPLSVYGAVAMAHSEDSEEYSAPYQFFFYLYDKRNAGLGGLSFDEGQFSVFGYTTVGRDILPQIKTGDVIQSAKLMEGQDRLVLP 793 ++G L L G G LQ + +++++ + V+ L V +E G + +PE+Y+ P L GR +VE+ ++ D + ++VLDGY+AP+TAGN LV YDG + + V+ E +D ++ +PLEIM G+ P+Y + L EL + LP + +G +AMA E+ E S Q F+ L + D G+++VFGY T +D L +K GDVI+S + + G D LV P Sbjct: 183 DRGVELLDKLEAGMGELQQI---VENRNREGVAPKQRELLQYVGSVEEDMVDGFPYEVPEEYQTMPLLKGRAVVEMKVKVKDNPNVD---------NCVFRIVLDGYNAPVTAGNFLDLVERHFYDGMEIQRRDGFVVQTGDPEGPAEGFIDPSTEKPRTIPLEIMVEGEKVPVYGSTLE----ELGLYKAQTKLPFNAFGTMAMAR-EEFENNSGSSQIFWLLKESELTPSNANILD-GRYAVFGYVTDNQDYLADLKVGDVIESVQAVSGVDNLVNP 443
BLAST of FC872466 vs. ExPASy Swiss-Prot
Match: PPI1_SYNY3 (Probable peptidyl-prolyl cis-trans isomerase sll0227 OS=Synechocystis sp. (strain PCC 6803) GN=sll0227 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.858e-19 Identity = 77/219 (35.16%), Postives = 106/219 (48.40%), Query Frame = 2 Query: 182 EQYKKY-PRLTGRGIVELTIEKGDGSSFSPEAGGEPRKTATIQVVLDGYSAPLTAGNVAKLVIDGAYDGTRLNCTNQAVLTEKGLDKGSDY------------NLPLEIMPSGQFE-----PLYRTALNVQDGELPVLPLSVYGAVAMAHSEDSEEYSAPYQFFFYLYDKRNAGLGGLSFDEGQFSVFGYTTVGRDILPQIKTGDVIQSAKLMEGQDRL 784 + YK Y PRL G+ VE+ + G+P I + +DG +AP+TAGN LV G Y+G + + + G KG N+PLEI E P+Y AL Q G PV+ GAVAMA S+ + SA QF+F L D+ F +G ++VFGY T G D++ +IK GD IQSAK++ GQ+ L Sbjct: 53 DPYKDYKPRLNGKATVEMMVN------------GQP-----IIIEVDGENAPITAGNFVDLVEQGFYNGLTFHRVVDGFVAQGGDPKGDGTGGYVDKNTQRPRNIPLEIKVDPAVENAPETPVYSRALGNQAG-FPVMLPHKTGAVAMARSQMPD--SASSQFYFTLSDETG-------FLDGDYAVFGYVTQGMDVVLKIKQGDKIQSAKVITGQNNL 244 The following BLAST results are available for this feature:
BLAST of FC872466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872466 ID=FC872466; Name=FC872466; organism=Citrus clementina; type=EST; length=921bpback to top |