FC872627

Overview
NameFC872627
Unique NameFC872627
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length212
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14256 contig Ccv1_Contig14256:6..217. BLAST: Citrus Unigene V1 Contigs to TAIR9
Homology
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BLAST of FC872627 vs. ExPASy Swiss-Prot
Match: M030_ARATH (Uncharacterized mitochondrial protein AtMg00030 OS=Arabidopsis thaliana GN=AtMg00030 PE=4 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.033e-28
Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = -1 
Query:    3 MFQFAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHS 173
            MFQFAKF KSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHS
Sbjct:    1 MFQFAKFSKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHS 57
The following BLAST results are available for this feature:
BLAST of FC872627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
M030_ARATH1.033e-2898.25Uncharacterized mitochondrial protein AtMg00030 OS... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAB3BD04ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3BD04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872627 ID=FC872627; Name=FC872627; organism=Citrus clementina; type=EST; length=212bp
GGGGAATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTC
AGAGGCGAAAGGCCATGGGGAGATACCGTCTGTGATCCATGGATCTCCGA
TCGGGAAACCGTATCCAAGCTCCGTGGCTAGTCTGCGCTCTTTGGACTTT
TCAAACTTAGCGAACTGAAACATCTGAGTAGATAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA
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