FC872628

Overview
NameFC872628
Unique NameFC872628
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10016 contig Ccv1_Contig10016:1..685. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872628 vs. ExPASy Swiss-Prot
Match: DRL31_ARATH (Putative disease resistance protein At5g05400 OS=Arabidopsis thaliana GN=At5g05400 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.769e-27
Identity = 65/136 (47.79%), Postives = 84/136 (61.76%), Query Frame = 1
Query:  100 KLHFVNCSNVKDLTWLVFVPNLKWLQIFNCDDMEEIISVEKFEKLGEVSKMMGEPILFSELELLVISNASNLKRIYRDPLPFPHLERIGISECPKLKKLPLNSSSAKGRKIVIYGEKEWWEELQWEDQATQNAFSP 507
            K+   NC+ +KDLTWLVF P+L  L +    D+E IIS  +  +L +  ++ G  I F ELE L + N   LK IYRDPL F  L+ I I  CPKL KLPL+S SA  + +VI  E+EW + LQWED AT+  F P
Sbjct:  739 KVRLDNCTGLKDLTWLVFAPHLATLYVVCLPDIEHIISRSEESRLQKTCELAGV-IPFRELEFLTLRNLGQLKSIYRDPLLFGKLKEINIKSCPKLTKLPLDSRSAWKQNVVINAEEEWLQGLQWEDVATKERFFP 873          
BLAST of FC872628 vs. ExPASy Swiss-Prot
Match: DRL40_ARATH (Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana GN=At5g63020 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.422e-23
Identity = 54/130 (41.54%), Postives = 82/130 (63.08%), Query Frame = 1
Query:  118 CSNVKDLTWLVFVPNLKWLQIFNCDDMEEIISVEKFEKLGEVSKMMGEPILFSELELLVISNASNLKRIYRDPLPFPHLERIGISECPKLKKLPLNSSSAKGRKIVIYGEKEWWEELQWEDQATQNAFSP 507
            C+ ++DLTWL+F PNL  L++ +  D++E+I+ EK E+   +         F EL+ L + N   LK I+R PLPFP L++I ++ C +L+KLPLN +S     +VI   K+W E L+WED+AT+  F P
Sbjct:  749 CTRLRDLTWLIFAPNLTVLRVISASDLKEVINKEKAEQQNLIP--------FQELKELRLENVQMLKHIHRGPLPFPCLQKILVNGCSELRKLPLNFTSVPRGDLVIEAHKKWIEILEWEDEATKARFLP 870          
BLAST of FC872628 vs. ExPASy Swiss-Prot
Match: DRL24_ARATH (Probable disease resistance protein At4g14610 OS=Arabidopsis thaliana GN=At4g14610 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.138e-23
Identity = 63/169 (37.28%), Postives = 95/169 (56.21%), Query Frame = 1
Query:   10 NMEHLQLFSIWDSNLEDWNVDCAGE--VQKMLKLHFVNCSNVKDLTWLVFVPNLKWLQIFNCDDMEEIISVEKFEKLGEVSKMMGEPILFSELELLVISNASNLKRIYRDPLPFPHLERIGISE-CPKLKKLPLNSSS--AKGRKIVIYGEKEWWEELQWEDQATQNAF 501
            +M +++   IW   +++  V+         + K+    C  +K+LTWL+F PNL +L     + +E+IIS EK   + + +  +  P  F +LE L +S+   LK IY  PL FP L  + + E CPKLKKLPLNS S  A    +V YGE +W E ++WED+AT+  F
Sbjct:  544 SMCNIRRIGIWKCGMKEIKVEMRTSSCFSSLSKVVIGQCDGLKELTWLLFAPNLTYLDARFAEQLEDIISEEKAASVTDENASIIIP--FQKLECLSLSDLPKLKSIYWSPLSFPRLSELAVQEHCPKLKKLPLNSKSGTAGVELVVKYGENKWLEGVEWEDKATELRF 710          
BLAST of FC872628 vs. ExPASy Swiss-Prot
Match: RPS5_ARATH (Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 9.218e-23
Identity = 60/138 (43.48%), Postives = 84/138 (60.87%), Query Frame = 1
Query:  100 KLHFVNCSNVKDLTWLVFVPNLKWLQIFNCDDMEEIISVEKFEKLGEVSKMMGEPILFSELELLVISNASNLKRIYRDPLPFPHLERIGISECPKLKKLPLNSSSA-KGRKIVI-YGEKEWWEELQWEDQATQNAFSP 507
            ++    C  +KDLTWL+F PNL +L++    ++E+IIS EK E+           + F +LE L +     LKRIY   L FP L+ I + +C KL+KLPL+S S   G ++VI YGE+EW E ++WEDQATQ  F P
Sbjct:  749 RVFIAKCHGLKDLTWLLFAPNLTFLEVGFSKEVEDIISEEKAEEHSATI------VPFRKLETLHLFELRGLKRIYAKALHFPCLKVIHVEKCEKLRKLPLDSKSGIAGEELVIYYGEREWIERVEWEDQATQLRFLP 880          
BLAST of FC872628 vs. ExPASy Swiss-Prot
Match: DRL19_ARATH (Putative disease resistance protein At1g63350 OS=Arabidopsis thaliana GN=At1g63350 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.218e-23
Identity = 61/166 (36.75%), Postives = 95/166 (57.23%), Query Frame = 1
Query:   13 MEHLQLFSIWDSNLEDWNVDCAGEVQKMLKLHFVNCSNVKDLTWLVFVPNLKWLQIFNCDDMEEIISVEKFEKLGEVSKMMGEPILFSELELLVISNASNLKRIYRDPLPFPHLERIGISECPKLKKLPLNSSSAK---GRKIVIYGEKEWWEELQWEDQATQNAF 501
            M+ LQ F+I   +  +  +        +++++  NC  +++LT+L+F PNLK L + + + +E+II+ EK    GE S +    + F +L  L + N   LK IY  PLPFP LE+I +  CP LKKLPL+S S K      I+ + E EW   ++WED+AT+  F
Sbjct:  710 MDRLQEFTIEHCHTSEIKMGRICSFSSLIEVNLSNCRRLRELTFLMFAPNLKRLHVVSSNQLEDIINKEKAHD-GEKSGI----VPFPKLNELHLYNLRELKNIYWSPLPFPCLEKINVMGCPNLKKLPLDSKSGKHGGNGLIITHREMEWITRVEWEDEATKTRF 870          
BLAST of FC872628 vs. ExPASy Swiss-Prot
Match: RFL1_ARATH (Disease resistance protein RFL1 OS=Arabidopsis thaliana GN=RFL1 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.503e-22
Identity = 66/159 (41.51%), Postives = 89/159 (55.97%), Query Frame = 1
Query:   40 WDSNLEDWNVDCAGEVQKMLKLHFVNCSNVKDLTWLVFVPNLKWLQIFNCDDMEEIISVEKFEKLGEVSKMMGEPILFSELELLVISNASNLKRIYRDPLPFPHLERIGI-SECPKLKKLPLNSSS-AKGRKIVI-YGEKEWWEELQWEDQATQNAFSP 507
            W  NL + N      V+         C  +KDLTWL+F PNL  L+++ C  +E+IIS EK       S +  E + F +LE L +   S LK IY + LPF  L  + I + CPKL+KLPL+S S  K  + VI Y EK+W E ++WED+ATQ  F P
Sbjct:  733 WKKNLTNPNFSNLSNVR------IEGCDGLKDLTWLLFAPNLINLRVWGCKHLEDIISKEK-----AASVLEKEILPFQKLECLNLYQLSELKSIYWNALPFQRLRCLDILNNCPKLRKLPLDSKSVVKVEEFVIKYKEKKWIERVEWEDEATQYRFLP 880          
BLAST of FC872628 vs. ExPASy Swiss-Prot
Match: DRL2_ARATH (Probable disease resistance protein At1g12290 OS=Arabidopsis thaliana GN=At1g12290 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.503e-22
Identity = 60/140 (42.86%), Postives = 86/140 (61.43%), Query Frame = 1
Query:  100 KLHFVNCSNVKDLTWLVFVPNLKWLQIFNCDDMEEIISVEKFEKLGEVSKMMGEPILFSELELLVISNASNLKRIYRDPLPFPHLERIGI-SECPKLKKLPLNSSS--AKGRKIVI-YGEKEWWEELQWEDQATQNAFSP 507
            K+    C+ +KDLTWL+F PNL  L ++N   +EEIIS EK            + + F +LE L + +   LK IY +PLPFP L +I + ++C KL KLPL+S S    G ++VI YG++EW E ++WED+AT+  F P
Sbjct:  744 KVLITGCNGLKDLTWLLFAPNLTHLNVWNSRQIEEIISQEK--------ASTADIVPFRKLEYLHLWDLPELKSIYWNPLPFPCLNQINVQNKCRKLTKLPLDSQSCIVAGEELVIQYGDEEWKERVEWEDKATRLRFLP 875          
BLAST of FC872628 vs. ExPASy Swiss-Prot
Match: DRL15_ARATH (Probable disease resistance protein At1g61180 OS=Arabidopsis thaliana GN=At1g61180 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 5.975e-22
Identity = 58/145 (40.00%), Postives = 85/145 (58.62%), Query Frame = 1
Query:  100 KLHFVNCSNVKDLTWLVFVPNLKWLQIFNCDDMEEIISVEKFEKLGEVSKMMGEPILFSELELLVISNASNLKRIYRDPLPFPHLERIGISECPKLKKLPLNSSS---AKGRKIVIYGEKEWWEELQWEDQATQNAFSPCFLPYE 525
            +L  + C ++KDLTW++F PNL  L I +  ++ EII+ EK   L  ++        F +LE L++ N   L+ IY  PLPFP L  + +S CPKL+KLPLN++S    +  +I +Y   E   EL+WED  T+N F P   PY+
Sbjct:  740 RLEIMKCHSMKDLTWILFAPNLVVLLIEDSREVGEIINKEKATNLTSITP-------FLKLEWLILYNLPKLESIYWSPLPFPVLLTMDVSNCPKLRKLPLNATSVSKVEEFEIHMYPPPEQENELEWEDDDTKNRFLPSIKPYK 877          
BLAST of FC872628 vs. ExPASy Swiss-Prot
Match: DRL23_ARATH (Putative disease resistance protein At4g10780 OS=Arabidopsis thaliana GN=At4g10780 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.804e-22
Identity = 62/179 (34.64%), Postives = 100/179 (55.87%), Query Frame = 1
Query:    4 LANMEHLQLFSIWDSNLED-------WNVDCAGEVQKMLKLHFVN-CSNVKDLTWLVFVPNLKWLQIFNCDDMEEIISVEKFEKLGEVSKMMGEPIL-FSELELLVISNASNLKRIYRDPLPFPHLERIGISECPKLKKLPLNSSSAK-GRKIVI-YGEKEWWEELQWEDQATQNAFSP 507
            L  M+ L+  ++W+  + +       WN +        L    ++ CS++KDLTWL+F PN+ +L I   + ++E+IS  K   + E  +     I+ F +L++L +S+   LK IY   L FP L  I +  CPKL+KLPL+S +   G+K V+ Y E EW E ++W+D+AT+  F P
Sbjct:  705 LPTMDSLRSLTMWNCEISEIEIERLTWNTNPTSPCFFNLSQVIIHVCSSLKDLTWLLFAPNITYLMIEQLEQLQELISHAKATGVTEEEQQQLHKIIPFQKLQILHLSSLPELKSIYWISLSFPCLSGIYVERCPKLRKLPLDSKTGTVGKKFVLQYKETEWIESVEWKDEATKLHFLP 883          
BLAST of FC872628 vs. ExPASy Swiss-Prot
Match: DRL1_ARATH (Probable disease resistance protein At1g12280 OS=Arabidopsis thaliana GN=At1g12280 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.331e-21
Identity = 57/139 (41.01%), Postives = 88/139 (63.31%), Query Frame = 1
Query:  103 LHFVNCSNVKDLTWLVFVPNLKWLQIFNCDDMEEIISVEKFEKLGEVSKMMGEPILFSELELLVISNASNLKRIYRDPLPFPHLERIGISECPKLKKLPLNSSSA-KGRKIVI-YGEKEWWEELQWEDQATQNAFSPCF 513
            +H  +C  +KDLTWL+F PNL  L++ + + +E II+ EK       +  M   I F +LE L + N + L+ IY  PL FP L+ I I++CP+L+KLPL+S  A +  ++VI Y E+EW E ++W+++AT+  F P F
Sbjct:  750 VHISSCDGLKDLTWLLFAPNLTSLEVLDSELVEGIINQEK-------AMTMSGIIPFQKLESLRLHNLAMLRSIYWQPLSFPCLKTIHITKCPELRKLPLDSEIAIRDEELVIKYQEEEWLERVEWDNEATRLRFLPFF 881          
The following BLAST results are available for this feature:
BLAST of FC872628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
DRL31_ARATH2.769e-2747.79Putative disease resistance protein At5g05400 OS=A... [more]
DRL40_ARATH1.422e-2341.54Probable disease resistance protein At5g63020 OS=A... [more]
DRL24_ARATH4.138e-2337.28Probable disease resistance protein At4g14610 OS=A... [more]
RPS5_ARATH9.218e-2343.48Disease resistance protein RPS5 OS=Arabidopsis tha... [more]
DRL19_ARATH9.218e-2336.75Putative disease resistance protein At1g63350 OS=A... [more]
RFL1_ARATH3.503e-2241.51Disease resistance protein RFL1 OS=Arabidopsis tha... [more]
DRL2_ARATH3.503e-2242.86Probable disease resistance protein At1g12290 OS=A... [more]
DRL15_ARATH5.975e-2240.00Probable disease resistance protein At1g61180 OS=A... [more]
DRL23_ARATH7.804e-2234.64Putative disease resistance protein At4g10780 OS=A... [more]
DRL1_ARATH1.331e-2141.01Probable disease resistance protein At1g12280 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BD05ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3BD05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872628 ID=FC872628; Name=FC872628; organism=Citrus clementina; type=EST; length=685bp
GGGCTAGCAAACATGGAGCATCTTCAGCTGTTCAGCATTTGGGACAGTAA
TTTGGAAGACTGGAATGTCGACTGCGCGGGAGAGGTACAAAAAATGCTTA
AACTTCACTTTGTTAATTGCTCAAATGTGAAGGACTTGACGTGGCTTGTT
TTTGTTCCAAATCTCAAGTGGCTGCAAATATTTAATTGTGATGACATGGA
AGAAATAATCAGTGTTGAAAAATTTGAAAAATTGGGTGAAGTTTCAAAGA
TGATGGGAGAGCCTATCTTGTTCTCAGAACTCGAACTTCTGGTAATAAGC
AATGCAAGTAATTTGAAGCGCATCTACCGCGATCCCTTGCCCTTTCCACA
CCTGGAGCGAATTGGCATATCGGAATGCCCAAAGTTGAAGAAGCTCCCGC
TCAATTCCAGCAGCGCAAAGGGACGTAAAATTGTCATTTACGGGGAGAAA
GAATGGTGGGAAGAGCTTCAATGGGAGGATCAAGCCACTCAAAATGCTTT
CTCGCCCTGTTTCCTACCTTATGAATTATAATAAAGTGCAATAACAAGCA
AGACTTTGAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAAAA
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