FC872661

Overview
NameFC872661
Unique NameFC872661
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11050 contig Ccv1_Contig11050:1356..2087. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 7.295e-61
Identity = 111/140 (79.29%), Postives = 121/140 (86.43%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            SECTAEEAYTW+QGRAIFASGSPFDP EY    FVPGQANNAYIFPGLG+GL++SGAIRVHD+M          QVTQENFDKGL+YPPF NI+KISAHIAA VAAKAYELGLATRLP P++LVKYAESCMYSP YR+YR
Sbjct:  452 SECTAEEAYTWTQGRAIFASGSPFDPVEYNGKTFVPGQANNAYIFPGLGMGLVISGAIRVHDEMLLAASEALARQVTQENFDKGLIYPPFSNIRKISAHIAANVAAKAYELGLATRLPQPENLVKYAESCMYSPVYRSYR 591          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.390e-57
Identity = 106/140 (75.71%), Postives = 119/140 (85.00%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            SECTAEEAYTWS+GRAIFASGSPFDP EY   +FVPGQANNAYIFPG GLGLIMSGAIRV D+M          QV++EN+DKGL+YPPF NI+KISA+IAA+VAAKAY+LGLA+ L  PKDLVKYAESCMYSP YR+YR
Sbjct:  450 SECTAEEAYTWSKGRAIFASGSPFDPVEYEGKLFVPGQANNAYIFPGFGLGLIMSGAIRVRDEMLLAASEALAAQVSEENYDKGLIYPPFTNIRKISANIAAKVAAKAYDLGLASHLKRPKDLVKYAESCMYSPGYRSYR 589          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 8.346e-57
Identity = 107/140 (76.43%), Postives = 116/140 (82.86%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            SECTAEEAYTWSQG AIFASGSPFDP EY    FVPGQANNAYIFPG GLGLIM GAIRVHDDM          QVT E+F KGL+YPPFK+I+KISAHIAA VAAKAYELGLA+RLP P DLVK+AESCMY+P YR++R
Sbjct:  446 SECTAEEAYTWSQGHAIFASGSPFDPVEYEGRTFVPGQANNAYIFPGFGLGLIMCGAIRVHDDMLLAASEALASQVTGEHFIKGLIYPPFKDIRKISAHIAAGVAAKAYELGLASRLPQPADLVKFAESCMYNPTYRSFR 585          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.142e-56
Identity = 101/140 (72.14%), Postives = 116/140 (82.86%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            SECTAE+AYTWSQGR+IFASGSPF P EY    FVPGQ+NNAYIFPGLGLGL++SGA+RVH+DM          Q TQ+NF+KG ++PPF +I+KISAHIAA VA KAYELGLATRLPPP DLVKYAE+CMY+P YR YR
Sbjct:  497 SECTAEQAYTWSQGRSIFASGSPFAPVEYEGKTFVPGQSNNAYIFPGLGLGLVISGAVRVHEDMLLAASKALADQATQDNFEKGSIFPPFTSIRKISAHIAAAVAGKAYELGLATRLPPPSDLVKYAENCMYTPVYRNYR 636          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 9.228e-56
Identity = 104/140 (74.29%), Postives = 118/140 (84.29%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            SECTAE+AYTWS+GRAIFASGSPF P EY   ++V GQANNAYIFPG GLGLI+SGAIRVHDDM          QVTQE+FDKGL++PPF +I+KISAHIAA+VAAKAYELGLA+RLP P++LV YAESCMYSP YR YR
Sbjct:  509 SECTAEQAYTWSEGRAIFASGSPFKPVEYNGKLYVSGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEAPAEQVTQEHFDKGLIFPPFTSIRKISAHIAAKVAAKAYELGLASRLPQPENLVAYAESCMYSPKYRIYR 648          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.205e-55
Identity = 100/140 (71.43%), Postives = 115/140 (82.14%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            SECTAEEAY WSQGRA+FASGSPFDP EY   + VPGQ+NNAYIFPG GLG+++SGA+RVH+DM          Q TQENF+KG ++PPF NI+KISA IAA VAAKAYELGLATRLP P+DL KYAESCMY+P YR+YR
Sbjct:  500 SECTAEEAYNWSQGRAVFASGSPFDPVEYNGKIHVPGQSNNAYIFPGFGLGVVISGAVRVHEDMLLAASETLADQATQENFEKGSIFPPFTNIRKISARIAASVAAKAYELGLATRLPQPRDLEKYAESCMYTPVYRSYR 639          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.685e-55
Identity = 103/140 (73.57%), Postives = 116/140 (82.86%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            SECTAE+AYTWS+GR IFASGSPF P EY   V+V GQ+NNAYIFPG GLGLI+SGAIRVHD+M          QVTQE+FD GL+YPPF NI+KISAHIAA+VAAKAYELGLA+RLP P++LV YAESCMYSP YR YR
Sbjct:  508 SECTAEQAYTWSEGRTIFASGSPFAPVEYNGKVYVSGQSNNAYIFPGFGLGLIISGAIRVHDEMLLAASEALAEQVTQEHFDNGLIYPPFTNIRKISAHIAAKVAAKAYELGLASRLPQPENLVAYAESCMYSPKYRNYR 647          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 213.772 bits (543), Expect = 7.812e-55
Identity = 102/140 (72.86%), Postives = 116/140 (82.86%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            SECTA+EAYTW++G+AIFASGSPFDP EY   VFVPGQ+NNAYIFPGLGLGL++SGAIRVHDDM         GQ+ +E   KGL+YPP  NI+KIS  IAA VAAKAYELGLATRLP P++LVK+AESCMYSPAYR YR
Sbjct:  452 SECTAQEAYTWTKGKAIFASGSPFDPVEYEGKVFVPGQSNNAYIFPGLGLGLVISGAIRVHDDMLLAAAEALAGQIKEEYLAKGLIYPPLSNIRKISVQIAANVAAKAYELGLATRLPRPENLVKHAESCMYSPAYRYYR 591          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.273e-54
Identity = 105/140 (75.00%), Postives = 115/140 (82.14%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 424
            SECTAEEAY+WS+GRAIFASGSPF P EY   V+  GQANNAYIFPG GLGLI+SGAIRVHDDM          +V+QENF+KG   PPF NI+KISAHI A+VAAKAYELGLATRLP PKDLV YAESCMYSPAYR+YR
Sbjct:  435 SECTAEEAYSWSEGRAIFASGSPFAPVEYNGKVYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLVASEALADEVSQENFEKGTHIPPFSNIRKISAHI-AKVAAKAYELGLATRLPQPKDLVAYAESCMYSPAYRSYR 573          
BLAST of FC872661 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.175e-26
Identity = 58/140 (41.43%), Postives = 84/140 (60.00%), Query Frame = 2
Query:    5 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDN-VFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVTQENFDKGLLYPPFKNIKKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTY 421
            +ECTAE+ Y +++GR IFASGSPFDP    +     PGQ NN+Y+FPG+ LG+I  G   + +D+          QV++EN  +G LYPP   I+ +S  IA  +A +AY    A+  P PKDL  + +S +YS  Y ++
Sbjct:  402 AECTAEQCYKYTEGRGIFASGSPFDPVTLPNGKTLYPGQGNNSYVFPGVALGVIACGLKHIGEDVFLTTAEVIAEQVSEENLQEGRLYPPLVTIQHVSLKIAVRIAEEAYRNNTASTYPQPKDLEAFIQSQIYSTDYNSF 541          
The following BLAST results are available for this feature:
BLAST of FC872661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MAOX_VITVI7.295e-6179.29NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOX_PHAVU6.390e-5775.71NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOX_MESCR8.346e-5776.43NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOC_MAIZE4.142e-5672.14NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOC_FLATR9.228e-5674.29NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_ORYSJ1.205e-5571.43NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOC_FLAPR2.685e-5573.57NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_POPTR7.812e-5572.86NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOC_SOLLC2.273e-5475.00NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOX_ANAPL1.175e-2641.43NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BG03ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3BG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872661 ID=FC872661; Name=FC872661; organism=Citrus clementina; type=EST; length=732bp
GGGGTCTGAATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAG
CCATTTTTGCAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAAT
GTTTTTGTGCCTGGCCAGGCAAATAATGCATACATTTTCCCTGGACTTGG
TTTGGGGTTAATAATGTCTGGTGCAATCCGTGTTCATGATGACATGCTTC
TGGCAGCAGCGGAAGCATTGGCTGGACAAGTAACACAGGAAAACTTTGAC
AAGGGACTCCTTTACCCTCCATTTAAGAACATCAAAAAGATTTCAGCTCA
TATTGCTGCAGAGGTAGCTGCAAAAGCATACGAACTTGGTTTGGCAACTC
GCCTCCCTCCGCCTAAGGACCTGGTGAAGTATGCTGAGAGCTGCATGTAC
AGCCCTGCTTATCGAACCTACCGGTGAAATGGGAGGAATTCAATACAATT
GCTGTTTTGGAGTTCACATTACTCGTAATACTAGTCTGTTCTTTTATTTT
TTTACCTTGGGCTCCTTTTTAAAATGGTACTCCCTCTTCCTCCTTTCTTC
TGTGAAGTCACATAAGTTACCCTGGTGGGTAAGAATCAGCATGGTGGGTA
GTGGTAGGTGCATCTAGCAAAGTAAAAAAATATAGCATGAAAAATGATGT
TGTTGTGGACTTGGAAATTCTACATGAAATGAAATTCAGGTTAACCGTTC
ATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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