FC872843

Overview
NameFC872843
Unique NameFC872843
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length868
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14367 contig Ccv1_Contig14367:279..1148. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872843 vs. ExPASy Swiss-Prot
Match: AEDO_HUMAN (2-aminoethanethiol dioxygenase OS=Homo sapiens GN=ADO PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 8.028e-23
Identity = 76/247 (30.77%), Postives = 115/247 (46.56%), Query Frame = 2
Query:   23 AAFSPEGPVTD---EALERVRAMLDKIKPSDVGLEQEAQLVRNWPGPVLERNGRHPSLAPIKYLHLHECDSFSIGIFCMPPSSMIPLHNHPGMTVLSKLVYGSLHVKSYDWLDL----------PEP--EDPLQ------ARPAKLVKDTDMTAPCGTTVLYPTTGGNIHCFRAIT-PCAIFDILSPPYSADHGRHCTYFR-RSPRRDLSGELEVNGVTVSEVSWLEEFQPPDNFVIRRGHYKGPVI 694
            AA  PE P+     E L +++++L +++  D+ +      ++  P          P+L P+ Y+H++E D FS+G+F +   + IPLH+HPGM  + K++YG++ +   D LD           PE   E PLQ       RP  L    + T   G  +L P    N+H   A+  P A  DIL+PPY  D GR C Y+R   P R    E   +   +    WL E    D+F      Y GP +
Sbjct:   35 AASGPEAPMQPGFPENLSKLKSLLTQLRAEDLNIAPRKATLQPLP----------PNLPPVTYMHIYETDGFSLGVFLLKSGTSIPLHDHPGMHGMLKVLYGTVRISCMDKLDAGGGQRPRALPPEQQFEPPLQPREREAVRPGVLRSRAEYTEASGPCILTPHR-DNLHQIDAVEGPAAFLDILAPPYDPDDGRDCHYYRVLEPVR--PKEASSSACDLPREVWLLETPQADDFWCEGEPYPGPKV 268          
BLAST of FC872843 vs. ExPASy Swiss-Prot
Match: AEDO_MOUSE (2-aminoethanethiol dioxygenase OS=Mus musculus GN=Ado PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 9.813e-21
Identity = 77/239 (32.22%), Postives = 112/239 (46.86%), Query Frame = 2
Query:   38 EGPVTD--EALERVRAMLDKIKPSDVGLEQEAQLVRNWPGPVLERNGRHPSLAPIKYLHLHECDSFSIGIFCMPPSSMIPLHNHPGMTVLSKLVYGSLHVKSYDWLDL------PEPED----PLQ------ARPAKLVKDTDMTAPCGTTVLYPTTGGNIHCFRAIT-PCAIFDILSPPYSADHGRHCTYFR-RSPRRDLSGELEVNGVTVSEVSWLEEFQPPDNFVIRRGHYKGPVI 694
            EGP     E L  ++++L +++  D+ +     L    P P L RN     L P+ Y+H++E + FS+G+F +   + IPLH+HPGM  + K++YG++ +   D LD       P PE     PLQ       RP  L    + T   G  VL P    N+H   A+  P A  DIL+PPY  + GR C Y+R   P R    E   +   +    WL E    D+F      Y GP +
Sbjct:   29 EGPAPGFPENLSLLKSLLTQVRAEDLNIAPRKAL----PQP-LPRN-----LPPVTYMHIYETEGFSLGVFLLKSGTCIPLHDHPGMHGMLKVLYGTVRISCMDKLDTGAGHRRPPPEQQFEPPLQPLEREAVRPGVLRSRAEYTEASGPCVLTPHR-DNLHQIDAVDGPAAFLDILAPPYDPEDGRDCHYYRVVEPIR--PKEASGSACDLPREVWLLETPQADDFWCEGEPYPGPKV 254          
BLAST of FC872843 vs. ExPASy Swiss-Prot
Match: AEDO_DICDI (Probable 2-aminoethanethiol dioxygenase OS=Dictyostelium discoideum GN=ado-1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.621e-15
Identity = 61/211 (28.91%), Postives = 99/211 (46.92%), Query Frame = 2
Query:   62 LERVRAMLDKIKPSDVGLEQEAQLVRNWPGPVLERNGRHPSLAPIKYLHLHECDSFSIGIFCMPPSSMIPLHNHPGMTVLSKLVYGSLHVKSYDWLDLPEPEDPLQARPAKLVKDTDMTAPCGTTVLYPT---------TGGNIHCFRA-ITPCAIFDILSPPYSADHGRHCTYFRRSPRRDLSGELEVNGVTVSEVSWLEEFQPPDNFVI 664
            L+ + ++  +IK  D+ +++   L +    P+   NG+      + Y  L E + F++ IF  PP++ IP H+HP MTVLSK++YGS+   S+DW+D               VK        GT +L               NIH F++    CA+ D+L PPY ++  R CTY+R +          VNG  V  + +  +F   +  +I
Sbjct:   25 LDSLVSVFKEIKCKDLKIDKPLTLTK----PI--GNGKK-----VFYYPLVENEKFTLAIFAFPPNTCIPTHDHPQMTVLSKVLYGSISCDSFDWID-----------NTSNVKKQGKAIYTGTNILNSNDEKVKITLPNENNIHRFQSGDEHCAVLDLLYPPYDSNFYRSCTYYRPT---------SVNGSIVDLMPYYPDFDCEEIIII 204          
The following BLAST results are available for this feature:
BLAST of FC872843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AEDO_HUMAN8.028e-2330.772-aminoethanethiol dioxygenase OS=Homo sapiens GN=... [more]
AEDO_MOUSE9.813e-2132.222-aminoethanethiol dioxygenase OS=Mus musculus GN=... [more]
AEDO_DICDI1.621e-1528.91Probable 2-aminoethanethiol dioxygenase OS=Dictyos... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAB2AA10ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB2AA10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872843 ID=FC872843; Name=FC872843; organism=Citrus clementina; type=EST; length=868bp
GGGACTTTACAATACTTGCAGAGCAGCATTCTCGCCTGAAGGGCCCGTCA
CGGATGAAGCCCTTGAGAGAGTTCGTGCTATGTTAGACAAAATCAAGCCT
TCAGACGTAGGTCTCGAACAGGAGGCGCAATTGGTACGTAATTGGCCAGG
TCCTGTGCTTGAACGCAATGGGAGGCATCCATCACTGGCTCCAATCAAGT
ACCTGCACTTACATGAATGTGACAGCTTCTCTATAGGTATTTTCTGTATG
CCACCATCCTCCATGATACCCCTTCATAATCATCCAGGAATGACTGTTTT
GAGCAAGCTTGTCTATGGTTCCTTACATGTCAAGTCATATGATTGGCTTG
ATTTGCCTGAGCCTGAAGATCCATTGCAAGCAAGACCTGCGAAGCTTGTT
AAAGATACAGATATGACAGCCCCTTGTGGGACGACAGTTCTTTATCCCAC
AACCGGAGGGAACATTCATTGTTTCAGAGCCATAACTCCCTGTGCTATCT
TTGATATCCTCTCCCCTCCATACTCGGCAGATCATGGGCGACACTGCACT
TATTTCCGGAGATCTCCAAGAAGGGATCTTTCAGGTGAACTCGAAGTGAA
TGGAGTTACTGTCTCTGAAGTTTCCTGGCTAGAAGAGTTTCAACCCCCTG
ACAACTTTGTGATACGAAGAGGGCATTACAAGGGTCCAGTTATTAGAACT
TGAGAAATCTTGTTTCATGTACCATGCATGCATTCTAATGATATTGGCTC
TTCATATTATGGGGAATAGAAGGGAAATTGTTCATGGGTTGTCAATAGCC
TAGGCAATAATTTTTTTTGGGGCTATGTAATTTAGGCATTGGGCGTGTAC
ATATTATTATACACCATT
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