FC872949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872949 vs. ExPASy Swiss-Prot
Match: TBC15_MOUSE (TBC1 domain family member 15 OS=Mus musculus GN=Tbc1d15 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.115e-17 Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 3 Query: 6 SPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMW 290 SP++ ++ENE DAFWCF M ++ NF E G++TQL L+++ +++D +LE+ G F FR L++ F+REFSF D L LWE+MW Sbjct: 444 SPLLYVMENEVDAFWCFASYMDQMHQNFE--EQMQGMKTQLIQLSTLLRLLDSGFCSYLESQDSGYLYFCFRWLLIRFKREFSFLDILRLWEVMW 536
BLAST of FC872949 vs. ExPASy Swiss-Prot
Match: TBC15_HUMAN (TBC1 domain family member 15 OS=Homo sapiens GN=TBC1D15 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 7.115e-17 Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 3 Query: 6 SPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMW 290 SP++ ++ENE DAFWCF M ++ NF E G++TQL L+++ +++D +LE+ G F FR L++ F+REFSF D L LWE+MW Sbjct: 461 SPLLYVMENEVDAFWCFASYMDQMHQNFE--EQMQGMKTQLIQLSTLLRLLDSGFCSYLESQDSGYLYFCFRWLLIRFKREFSFLDILRLWEVMW 553
BLAST of FC872949 vs. ExPASy Swiss-Prot
Match: TBC17_HUMAN (TBC1 domain family member 17 OS=Homo sapiens GN=TBC1D17 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.612e-16 Identity = 43/106 (40.57%), Postives = 63/106 (59.43%), Query Frame = 3 Query: 6 SPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPHLFYL 323 SP++ +++NE DAFWCF M ++GNF ES ++ QL L + +V+DP L L++ G F FR L++ F+REF F D L LWE++W P+L L Sbjct: 425 SPILYVIQNEVDAFWCFCGFMELVQGNFE--ESQETMKRQLGRLLLLLRVLDPLLCDFLDSQDSGSLCFCFRWLLIWFKREFPFPDVLRLWEVLWTGLPGPNLHLL 528
BLAST of FC872949 vs. ExPASy Swiss-Prot
Match: TBC17_MOUSE (TBC1 domain family member 17 OS=Mus musculus GN=Tbc1d17 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.904e-15 Identity = 42/106 (39.62%), Postives = 61/106 (57.55%), Query Frame = 3 Query: 6 SPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPHLFYL 323 SP++ +++NE DAFWCF M + GNF ES ++ QL L + +V+D L L++ G F FR L++ F+REF F D L LWE++W P+L L Sbjct: 425 SPILFVVQNEVDAFWCFCGFMELVHGNFE--ESQETMKRQLGQLLLLLRVLDQPLCDFLDSQDSGSLCFCFRWLLIWFKREFPFPDVLRLWEVLWTGLPGPNLHLL 528
BLAST of FC872949 vs. ExPASy Swiss-Prot
Match: GYP7_YEAST (GTPase-activating protein GYP7 OS=Saccharomyces cerevisiae GN=GYP7 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.938e-14 Identity = 46/190 (24.21%), Postives = 76/190 (40.00%), Query Frame = 3 Query: 6 SPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPHLFYLYXXXXXXXXXXXXXXXXXXXXIRQCGKYERENMKNGAKTSEAPLPISVFLVASVLKDKSSKLLQEARGLDDVVKILNDMTGNLD 575 SP+ ++++ E FWCF M + NF +S G+ Q+ L + Q++ P+L +HL G+ F FRML+V F+REF D +++WE W Y +F + ++L+ S +LQ D ++K N++ G LD Sbjct: 538 SPIYVIMKEEWKTFWCFTHFMDIMERNFLRDQS--GIHEQMLTLVELVQLMLPELSEHLNKCDSGNLFFCFRMLLVWFKREFEMEDIMHIWENFWTFYYSSQ-------------------------------------------------FQLFFMLAILQKNSQAILQHLNQFDQILKFFNELNGKLD 676
BLAST of FC872949 vs. ExPASy Swiss-Prot
Match: GYP7_DEBHA (GTPase-activating protein GYP7 OS=Debaryomyces hansenii GN=GYP7 PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 6.233e-13 Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = 3 Query: 6 SPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDP--HLFY 320 SP+ + ++E+ FW F M R+ NF +S G++ Q+ L + Q + P L +HLE D F FRML+V F+REF + L LWE++W Y HLF+ Sbjct: 545 SPLYVTFQDESLTFWAFVNFMDRMERNFLRDQS--GMKNQMLTLNELVQFMLPDLFKHLEKCESTDLYFFFRMLLVWFKREFEWSSVLSLWEILWTDYYSGQFHLFF 649
BLAST of FC872949 vs. ExPASy Swiss-Prot
Match: GYP7_CANGA (GTPase-activating protein GYP7 OS=Candida glabrata GN=GYP7 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.233e-13 Identity = 37/108 (34.26%), Postives = 59/108 (54.63%), Query Frame = 3 Query: 6 SPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDP--HLFYL 323 SP+ ++ +E FWCF M R+ NF +S G+ Q+ L + Q++ P+L HL+ D F FRML+V F+REF++ D +WE+ + Y LF++ Sbjct: 528 SPLYYIIRDEETTFWCFTNFMERMERNFLRDQS--GIRDQMLALTDLCQLMLPRLSAHLQKCDSSDLFFCFRMLLVWFKREFNYDDIFNIWEVFFTDFYSSQYQLFFM 633
BLAST of FC872949 vs. ExPASy Swiss-Prot
Match: GYP7_YARLI (GTPase-activating protein GYP7 OS=Yarrowia lipolytica GN=GYP7 PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 4.040e-12 Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = 3 Query: 6 SPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPHLFYLY 326 SP+ ++L+++ AFW F M R+ N+ +S G+ QL L + Q + P L++HLE + F FRML+V F+RE + D L LWE++W +Y F L+ Sbjct: 524 SPLYVVLQDDTLAFWAFSAFMERMERNYLRDQS--GMRNQLLCLDHLVQFMLPSLYKHLEKTESTNLFFFFRMLLVWFKRELLWDDVLRLWEVLWT-DYLSSQFVLF 627
BLAST of FC872949 vs. ExPASy Swiss-Prot
Match: GYP7_SCHPO (GTPase-activating protein gyp7 OS=Schizosaccharomyces pombe GN=gyp7 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.467e-11 Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 3 Query: 6 SPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWA--LEYDPHLFYLY 326 +P+ + + A FW LM+RL NF +S G+ QL L + + +DP+L HLE + FRML++ F+REF + L LW++++ L YD H+F Y Sbjct: 538 APIYVTFNDNALTFWGMVGLMKRLHFNFLRDQS--GMHRQLDTLRLLIEFMDPELFAHLEKTDSSNLFCFFRMLLIYFKREFDWEVLLKLWDVLFTNYLSYDYHIFVAY 644 The following BLAST results are available for this feature:
BLAST of FC872949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872949 ID=FC872949; Name=FC872949; organism=Citrus clementina; type=EST; length=912bpback to top |