FC872972
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872972 vs. ExPASy Swiss-Prot
Match: JKD_ARATH (Zinc finger protein JACKDAW OS=Arabidopsis thaliana GN=JKD PE=1 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 9.513e-65 Identity = 120/188 (63.83%), Postives = 135/188 (71.81%), Query Frame = 3 Query: 276 LQMMSGNAFTIPSSLGGFVHQEXXXXXXXXXXXXXXXXX----------------RNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKDVIKKKVYICPEKTCVHHEPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSQTCGTREYKC 791 +QM+ G+ F+I SS+GGFVHQE RN PGTPDPDA+VIALSP TLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL+QR+ ++VIKKKVYICP KTCVHH+ SRALGDLTGIKKH+SRKHG YAVQSDWKAH++TCGTREYKC Sbjct: 1 MQMIPGDPFSISSSMGGFVHQETHLHHLQQQIPDLNPNSNPNPNAKPNSSSAKKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKC 188
BLAST of FC872972 vs. ExPASy Swiss-Prot
Match: MGP_ARATH (Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.203e-59 Identity = 104/133 (78.20%), Postives = 116/133 (87.22%), Query Frame = 3 Query: 393 RNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKDVIKKKVYICPEKTCVHHEPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSQTCGTREYKC 791 RNLPG PDP+AEVIALSPKTLMATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKL+QRT+K+V +K+VY+CPEK+CVHH P+RALGDLTGIKKHF RKHG YAVQSDWKAHS+TCGTREY+C Sbjct: 44 RNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEV-RKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRC 175
BLAST of FC872972 vs. ExPASy Swiss-Prot
Match: NUC_ARATH (Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana GN=NUC PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 4.573e-59 Identity = 110/168 (65.48%), Postives = 122/168 (72.62%), Query Frame = 3 Query: 288 SGNAFTIPSSLGGFVHQEXXXXXXXXXXXXXXXXXRNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKDVIKKKVYICPEKTCVHHEPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSQTCGTREYKC 791 SG+ F P S H E RNLPG PDP+AEVIALSP TLMATNRF+CE+C KGFQRDQNLQLHRRGHNLPWKL+QRT+K+V +K+VY+CPEKTCVHH SRALGDLTGIKKHF RKHG YAVQSDWKAHS+TCGTREY+C Sbjct: 11 SGSGFAQPQSSSTLDHDESLINPPLVKKK------RNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEV-RKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRC 171 The following BLAST results are available for this feature:
BLAST of FC872972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872972 ID=FC872972; Name=FC872972; organism=Citrus clementina; type=EST; length=792bpback to top |