FC873151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP3_ARATH (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana GN=CLPP3 PE=1 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 3.177e-71 Identity = 140/213 (65.73%), Postives = 168/213 (78.87%), Query Frame = 1 Query: 175 KMEMSLTASSFSKPLFFSNQSLSKTHFLXXXXXXXXXXXIKTRRPTCIKAANS-SPSIAQTLSTNWDVSNFAVNNNTSSPY-LPKFEELDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807 +M + L +SS S P+ N + + KT +P C++++ S S QTLS+NWDVS+F++++ SP LP FEELDTTNMLLRQRI+FLGSQVDD+TAD +ISQLL LDAEDS++DI LFINSPGGS+TAGMGIYDAMK CKADVST+CLGLAASMGAFLLA+GSKGKRYCMPN++VMIHQPLGTAGGKAT+MSIRIRE Sbjct: 2 EMSLRLASSSTSNPICLLNPGKNLNFPIRNHRIP------KTSKPFCVRSSMSLSKPPRQTLSSNWDVSSFSIDSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIRE 208
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP4_ARATH (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana GN=CLPP4 PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.426e-41 Identity = 93/213 (43.66%), Postives = 132/213 (61.97%), Query Frame = 1 Query: 169 NKKMEMSLTASSFSKPLFFSNQSLSKTHFLXXXXXXXXXXXIKTRRPTCIKAANSSPSIAQTLSTNWDVSNFAVNNNTSSPYLPKFEELDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807 + ++ SL +S + S+ S K + L ++T P+ ++ AN+S ++QT + A+ E D +LLR+RI+FLGS +DD AD I+SQLL LDA+D KKDI+LFINSPGGS++A M IYD ++L +ADVSTI LG+AAS + +L AG+KGKR+ MPN R+MIHQPLG A G+A D+ I+ +E Sbjct: 7 SSSLKPSLVSSRLNSSSSASSSSFPKPNNLYLKPTKLISPPLRTTSPSPLRFANASIEMSQTQES-------AIRG----------AESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKE 202
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP1_ANAVT (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP1 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.474e-41 Identity = 84/124 (67.74%), Postives = 102/124 (82.26%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807 D + LLR+RIIFLG QVD A+ I++QLLFLDAED +KDI L+INSPGGSVTAGMGI+D MK + DV TIC GLAASMGAFLL+AG+KGKR +P++R+MIHQPLG A G+ATD+ I+ RE Sbjct: 18 DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATDIEIQARE 141
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP1_ANASP (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=clpP1 PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.844e-41 Identity = 83/124 (66.94%), Postives = 102/124 (82.26%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807 D + LLR+RI+FLG QVD A+ I++QLLFLDAED +KDI L+INSPGGSVTAGMGI+D MK + DV TIC GLAASMGAFLL+AG+KGKR +P++R+MIHQPLG A G+ATD+ I+ RE Sbjct: 18 DIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEIQARE 141
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_SYNWW (ATP-dependent Clp protease proteolytic subunit OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=clpP PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.900e-40 Identity = 80/123 (65.04%), Postives = 97/123 (78.86%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIR 804 D + LL+ RIIFLGS +DD A+ +I+QLLFL+AED KDI L+INSPGGS+TAGM IYD ++ + DVSTIC+GLAASMGAFLLAAG KGKRY +PNA +MIHQP G G+ATD+ I R Sbjct: 20 DIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPGGSITAGMAIYDTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEIMIHQPAGGTQGQATDIEIHAR 142
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_BURTA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=clpP PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.788e-40 Identity = 78/124 (62.90%), Postives = 104/124 (83.87%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807 D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IYD M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I+ RE Sbjct: 32 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQARE 155
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_BURPS (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei GN=clpP PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.788e-40 Identity = 78/124 (62.90%), Postives = 104/124 (83.87%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807 D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IYD M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I+ RE Sbjct: 42 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQARE 165
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_BURP6 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei (strain 668) GN=clpP PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.788e-40 Identity = 78/124 (62.90%), Postives = 104/124 (83.87%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807 D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IYD M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I+ RE Sbjct: 42 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQARE 165
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_BURP1 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei (strain 1710b) GN=clpP PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.788e-40 Identity = 78/124 (62.90%), Postives = 104/124 (83.87%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807 D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IYD M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I+ RE Sbjct: 32 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQARE 155
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_BURP0 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei (strain 1106a) GN=clpP PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.788e-40 Identity = 78/124 (62.90%), Postives = 104/124 (83.87%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807 D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IYD M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I+ RE Sbjct: 42 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQARE 165 The following BLAST results are available for this feature:
BLAST of FC873151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873151 ID=FC873151; Name=FC873151; organism=Citrus clementina; type=EST; length=809bpback to top |