FC873251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873251 vs. ExPASy Swiss-Prot
Match: RL7A_ORYSJ (60S ribosomal protein L7a OS=Oryza sativa subsp. japonica GN=RPL7A PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.684e-26 Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 1 Query: 1 SRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQXXXXXXXXXXXXXXXQRLT 237 +RLGSIVHKKTASVLCLTTVKNEDK+EFSKILEAIKANFNDK++E+RKKWGGG+MGSKSQ QR+T Sbjct: 180 ARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKEAAQRMT 258
BLAST of FC873251 vs. ExPASy Swiss-Prot
Match: RL7A1_ARATH (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana GN=RPL7AA PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 1.829e-25 Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 1 Query: 1 SRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQ 180 SRLG++VH+KTAS LCLTTVKNEDK+EFSKILEAIKANFNDKYEE RKKWGGGIMGSKSQ Sbjct: 179 SRLGAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQ 238
BLAST of FC873251 vs. ExPASy Swiss-Prot
Match: RL7A2_ARATH (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana GN=RPL7AB PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.119e-25 Identity = 53/60 (88.33%), Postives = 58/60 (96.67%), Query Frame = 1 Query: 1 SRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQ 180 SRLG++VH+KTA+ LCLTTVKNEDK+EFSKILEAIKANFNDKYEE RKKWGGGIMGSKSQ Sbjct: 178 SRLGAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQ 237
BLAST of FC873251 vs. ExPASy Swiss-Prot
Match: RL7A_DROME (60S ribosomal protein L7a OS=Drosophila melanogaster GN=RpL7A PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 7.700e-16 Identity = 35/59 (59.32%), Postives = 47/59 (79.66%), Query Frame = 1 Query: 1 SRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 177 +RLG +V +KT + L LTTV N DK F K+LEA+K NFN+++EE+R+ WGGGI+GSKS Sbjct: 193 ARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKS 251
BLAST of FC873251 vs. ExPASy Swiss-Prot
Match: RL8_SCHPO (60S ribosomal protein L8 OS=Schizosaccharomyces pombe GN=rpl8 PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 3.822e-15 Identity = 34/60 (56.67%), Postives = 49/60 (81.67%), Query Frame = 1 Query: 1 SRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQ 180 +RLG+++H+KTA+VL +T V+ EDK E + I+ A+ ANF+ KY+E R+KWGGGIMG K+Q Sbjct: 184 ARLGTVIHQKTAAVLAVTEVREEDKNELASIVSAVDANFSAKYDESRRKWGGGIMGGKTQ 243
BLAST of FC873251 vs. ExPASy Swiss-Prot
Match: RL7A_ICTPU (60S ribosomal protein L7a OS=Ictalurus punctatus GN=rpl7a PE=2 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 9.413e-14 Identity = 31/59 (52.54%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 1 SRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 177 +RLG +VH+KT + +C T ED+ +K++EAIK N+ND+YEE+R+ WGG IMG KS Sbjct: 188 ARLGRLVHRKTCTSVCFTQTNPEDRAALAKLVEAIKTNYNDRYEEIRRHWGGNIMGPKS 246
BLAST of FC873251 vs. ExPASy Swiss-Prot
Match: RL7A_TAKRU (60S ribosomal protein L7a OS=Takifugu rubripes GN=rpl7a PE=3 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 3.577e-13 Identity = 31/59 (52.54%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 1 SRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 177 +RLG +VH+KT + + T EDK +K++EAIK N+ND+YEE+R+ WGGGI+G KS Sbjct: 188 ARLGRLVHRKTCTSVAFTQTNPEDKGALAKLVEAIKTNYNDRYEEIRRHWGGGILGPKS 246
BLAST of FC873251 vs. ExPASy Swiss-Prot
Match: RL7A_BOVIN (60S ribosomal protein L7a OS=Bos taurus GN=RPL7A PE=2 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 6.101e-13 Identity = 28/59 (47.46%), Postives = 45/59 (76.27%), Query Frame = 1 Query: 1 SRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 177 +RLG +VH+KT + + T V +EDK +K++EAI+ N+ND+Y+E+R+ WGG ++G KS Sbjct: 188 ARLGRLVHRKTCTTVAFTQVNSEDKSALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246
BLAST of FC873251 vs. ExPASy Swiss-Prot
Match: RL7A_ANOGA (60S ribosomal protein L7a OS=Anopheles gambiae GN=RpL7A PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 7.969e-13 Identity = 28/59 (47.46%), Postives = 47/59 (79.66%), Query Frame = 1 Query: 1 SRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 177 +RLG++V++KT + + LT V+N DK +K++E IK NFND+++++R+ WGGG++G KS Sbjct: 194 ARLGTLVYRKTCTCVALTQVENADKPNLAKLVETIKTNFNDRFDDIRRHWGGGLLGPKS 252
BLAST of FC873251 vs. ExPASy Swiss-Prot
Match: RL7A_RAT (60S ribosomal protein L7a OS=Rattus norvegicus GN=Rpl7a PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 1.041e-12 Identity = 28/59 (47.46%), Postives = 45/59 (76.27%), Query Frame = 1 Query: 1 SRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 177 +RLG +VH+KT + + T V +EDK +K++EAI+ N+ND+Y+E+R+ WGG ++G KS Sbjct: 188 ARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246 The following BLAST results are available for this feature:
BLAST of FC873251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873251 ID=FC873251; Name=FC873251; organism=Citrus clementina; type=EST; length=392bpback to top |