FC873312
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873312 vs. ExPASy Swiss-Prot
Match: APRR5_ARATH (Two-component response regulator-like APRR5 OS=Arabidopsis thaliana GN=APRR5 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21 Identity = 50/70 (71.43%), Postives = 58/70 (82.86%), Query Frame = 2 Query: 86 DSKNEEGLFPSNGNLR-SIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSETLP 292 + KNE+G S G ++ S+QREAAL KFR+KRKDRCY+KKVRYESRKKLAEQRPR+KGQFVRQV S P Sbjct: 489 EKKNEDGYSLSVGKIQQSLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQVQSTQAP 558
BLAST of FC873312 vs. ExPASy Swiss-Prot
Match: PRR95_ORYSJ (Two-component response regulator-like PRR95 OS=Oryza sativa subsp. japonica GN=PRR95 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.420e-18 Identity = 50/84 (59.52%), Postives = 58/84 (69.05%), Query Frame = 2 Query: 26 GSACGSNSNVDQVTAGRAAADSKNEEGLFPSNGNLRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVH 277 GS C S+SN + +N +GL + QREAALNKFRLKRKDRC++KKVRY+SRK LAEQRPRVKGQFVRQ H Sbjct: 541 GSVCDSSSNHMIAPTESSNVVPENPDGLRHLS------QREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQDH 618
BLAST of FC873312 vs. ExPASy Swiss-Prot
Match: APRR9_ARATH (Two-component response regulator-like APRR9 OS=Arabidopsis thaliana GN=APRR9 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.095e-17 Identity = 51/82 (62.20%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 38 GSNSNVDQVTAGRAAADSKNEEGLFPSNGNLRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSE 283 GS S + + AG++++ K +E RS QREAAL KFRLKRKDRC+DKKVRY+SRKKLAEQRPRVKGQFVR V+S+ Sbjct: 384 GSQSTNEGI-AGQSSSTEKPKEEESAKQRWSRS-QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVNSD 463
BLAST of FC873312 vs. ExPASy Swiss-Prot
Match: APRR7_ARATH (Two-component response regulator-like APRR7 OS=Arabidopsis thaliana GN=APRR7 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.523e-16 Identity = 52/110 (47.27%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 23 YGSACGSNSNVDQVTAGRAAADSKNEEGLFPSNG----NL----RSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSETLPLESENHSGNISD 328 YGS+ G N+ + + A + N +G +G NL + QREAAL KFR KRK+RC+ KKVRY+SRKKLAEQRPRV+GQFVR+ + T +N NI D Sbjct: 621 YGSSNGMNAGGMNMGSDNGAGKNGNGDGSGSGSGSGSGNLADENKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAAT----DDNDIKNIED 726
BLAST of FC873312 vs. ExPASy Swiss-Prot
Match: APRR3_ARATH (Two-component response regulator-like APRR3 OS=Arabidopsis thaliana GN=APRR3 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.982e-15 Identity = 39/52 (75.00%), Postives = 46/52 (88.46%), Query Frame = 2 Query: 116 SNGNLRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQ 271 S+G+ R QREAAL KFRLKRK+RC++KKVRY SRKKLAEQRP VKGQF+R+ Sbjct: 433 SSGSDRWAQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
BLAST of FC873312 vs. ExPASy Swiss-Prot
Match: PRR1_ORYSJ (Two-component response regulator-like PRR1 OS=Oryza sativa subsp. japonica GN=PRR1 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 7.345e-14 Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = 2 Query: 131 RSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVH 277 RS +R AAL KFRLKRK+RC+DKKVRY +RKKLAE RPRV+GQFVRQ + Sbjct: 439 RSERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQAN 487
BLAST of FC873312 vs. ExPASy Swiss-Prot
Match: APRR1_ARATH (Two-component response regulator-like APRR1 OS=Arabidopsis thaliana GN=APRR1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 2 Query: 140 QREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSETLPLESENHSGNISD 328 +RE AL KFR KR RC+DKK+RY +RK+LAE+RPRVKGQFVR+++ + L + S + D Sbjct: 532 RREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQPDSADYDD 594
BLAST of FC873312 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSJ (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.363e-12 Identity = 42/80 (52.50%), Postives = 48/80 (60.00%), Query Frame = 2 Query: 44 NSNVDQVTAGRAAADSKNEEGLFPSNGNLRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSE 283 N VD+ AG NG REAALNKFR KRK R + KKVRY+SRK+LAEQRPR++GQFVRQ E Sbjct: 682 NGIVDENGAGGGNGSGSGSGNDLYQNG---VCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQE 758
BLAST of FC873312 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSI (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. indica GN=PRR73 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.363e-12 Identity = 42/80 (52.50%), Postives = 48/80 (60.00%), Query Frame = 2 Query: 44 NSNVDQVTAGRAAADSKNEEGLFPSNGNLRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSE 283 N VD+ AG NG REAALNKFR KRK R + KKVRY+SRK+LAEQRPR++GQFVRQ E Sbjct: 682 NGIVDENGAGGGNGSGSGSGNDLYQNG---VCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQE 758
BLAST of FC873312 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSJ (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. japonica GN=PRR37 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.820e-11 Identity = 48/102 (47.06%), Postives = 57/102 (55.88%), Query Frame = 2 Query: 26 GSACGSNSNVDQVTAGRA-------AADSKNEEGLFPSNGN----------LRSIQRE---AALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQ 271 GS GSN TA A A + N+ G NG+ R QRE AA+ KFR KRK+R + KKVRY+SRK+LAEQRPRV+GQFVRQ Sbjct: 623 GSNNGSNGQNGSTTAVNAERPNMEIANGTINKSGPGGGNGSGSGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 724 The following BLAST results are available for this feature:
BLAST of FC873312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873312 ID=FC873312; Name=FC873312; organism=Citrus clementina; type=EST; length=580bpback to top |