FC873369
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873369 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.470e-34 Identity = 87/202 (43.07%), Postives = 116/202 (57.43%), Query Frame = 2 Query: 218 DATSNVHIVYMGEKKYEDPVAITKSHHRFLSTVLGSKEAAKHSILYSYKHGFSGFAARLTKTQAEKIAELPGVVQVIPNGILKLHTTRSWEFMGLHYYQSSKNLSTESNMXXXXXXXXXXXXVWPESESFSDKGMGQAPVPPHWKGICQKGEKFNSSNCNRKLIGARWFIKGIMDMINASTNTDEYFSPRDAVGHGTHTAST 823 D N++IVYMG +K EDP + H L V+GS A + S+L++YK F+GFA +LT+ +AEKIA + GVV V N + +LHTTRSW+F+G ++ ESN+ +WPES SF D+G +P PP WKG C E N+ CNRK+IGAR + I + + PRD GHGTHTAST Sbjct: 28 DDGKNIYIVYMG-RKLEDPDSAHLHHRAMLEQVVGSTFAPE-SVLHTYKRSFNGFAVKLTEEEAEKIASMEGVVSVFLNEMNELHTTRSWDFLGFPLTVPRRS-QVESNI----VVGVLDTGIWPESPSFDDEGF--SPPPPKWKGTC---ETSNNFRCNRKIIGARSY------HIGRPISPGDVNGPRDTNGHGTHTAST 211
BLAST of FC873369 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.792e-30 Identity = 74/196 (37.76%), Postives = 114/196 (58.16%), Query Frame = 2 Query: 236 HIVYMGEKKYEDPVAITKSHHRFLSTVLGSKEAAKHSILYSYKHGFSGFAARLTKTQAEKIAELPGVVQVIPNGILKLHTTRSWEFMGLHYYQSSKNLSTESNMXXXXXXXXXXXXVWPESESFSDKGMGQAPVPPHWKGICQKGEKFNSSNCNRKLIGARWFIKGIMDMINASTNTDEYFSPRDAVGHGTHTAST 823 +IV+M K + P + + + S++ ++A+ +LY+Y++ GF+ RLT+ +A+ + PGV+ V+P +LHTTR+ F+GL + + +L E+ VWPES+S+SD+G G P+P WKG C+ G F +S CNRKLIGAR+F +G + + E SPRD GHGTHT+ST Sbjct: 32 YIVHMA--KSQMPSSFDLHSNWYDSSLRSISDSAE--LLYTYENAIHGFSTRLTQEEADSLMTQPGVISVLPEHRYELHTTRTPLFLGLD--EHTADLFPEAGSYSDVVVGVLDTGVWPESKSYSDEGFG--PIPSSWKGGCEAGTNFTASLCNRKLIGARFFARGYESTMGPIDESKESRSPRDDDGHGTHTSST 219
BLAST of FC873369 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.221e-25 Identity = 74/196 (37.76%), Postives = 109/196 (55.61%), Query Frame = 2 Query: 236 HIVYMGEKKYEDPVAITKSHHRFLSTVLGSKEAAKHSILYSYKHGFSGFAARLTKTQAEKIAELPGVVQVIPNGILKLHTTRSWEFMGLHYYQSSKNLSTESNMXXXXXXXXXXXXVWPESESFSDKGMGQAPVPPHWKGICQKGEKFNSSNCNRKLIGARWFIKGIMDMINASTNTDEYFSPRDAVGHGTHTAST 823 +I+Y+G++ I K+H LS++ S+E AK +YSY F+ FAA+L+ +A+K+ E+ VV V N KLHTT+SW+F+GL + ++L E ++ + P+SESF D G+G P P WKG C G N + CN K+IGA++F + + E SP D GHGTHT+ST Sbjct: 38 YIIYLGDRPDNTEETI-KTHINLLSSLNISQEEAKERKVYSYTKAFNAFAAKLSPHEAKKMMEMEEVVSVSRNQYRKLHTTKSWDFVGLP-LTAKRHLKAERDV----IIGVLDTGITPDSESFLDHGLG--PPPAKWKGSC--GPYKNFTGCNNKIIGAKYF------KHDGNVPAGEVRSPIDIDGHGTHTSST 217 The following BLAST results are available for this feature:
BLAST of FC873369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873369 ID=FC873369; Name=FC873369; organism=Citrus clementina; type=EST; length=824bpback to top |