FC873460

Overview
NameFC873460
Unique NameFC873460
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10158 contig Ccv1_Contig10158:1..691. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_THEEB (Chaperone protein dnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 6.675e-45
Identity = 91/220 (41.36%), Postives = 122/220 (55.45%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG------EYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPD+NK PGAEEKFKEI+ AYEVLSD + R+ YDRFGEAG++G         G+ +     D FE +                                D+RYDL L F E++FGG++ I ++  ETC +C GTGAK      +C  C G G V ++ RTPFG  +Q++TC  CGG G +I D C  CGG G +Q  + +K+ IP GV NG  ++
Sbjct:   27 LARKYHPDVNKEPGAEEKFKEINRAYEVLSDPQARANYDRFGEAGVSGVGAAGFSDFGIGDMGGFADIFETFFGGFTTSSRRQQGPTRGE--------------DLRYDLKLEFREAVFGGEKEIRINHLETCKTCQGTGAKPGTRPVTCSTCGGVGQVRRSARTPFGSFTQLTTCPTCGGSGVVIEDRCESCGGQGHIQVSKKLKITIPAGVDNGTRLR 232          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP4 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.663e-43
Identity = 89/217 (41.01%), Postives = 120/217 (55.30%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE---YDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPD+NK  GAEE+FKEI+ AYEVLSD E R+ YDRFGEAG++G    Y  + +     D FE   +                              D+R+DL L F E+IFGG++ I ++  ETC +C G+GAK     ++C  C G G V +  RTPFG  +QVS C  C G G++I D C  CGGNG+ Q  + +K+ IP GV  G  ++
Sbjct:   27 LARKYHPDVNKEAGAEERFKEINRAYEVLSDPETRARYDRFGEAGVSGAAAGYGDMGDMGGFADIFESIFSGFGGVGAGTSRRRTGPSRGD----------DLRFDLKLEFREAIFGGEKQIRITHLETCTTCNGSGAKPGTKPRTCGTCGGAGQVRRATRTPFGSFTQVSVCPTCNGKGQVIEDKCETCGGNGQAQVTKKLKITIPAGVDTGTRLR 233          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNP2 (Chaperone protein dnaJ OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.066e-42
Identity = 90/219 (41.10%), Postives = 120/219 (54.79%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQG-----VDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  QYHPD+NK PGAEEKFKEI+ AYEVLS+ E R+ YDRFGEAG++G   G +    G      D FE   +                              D+R DL L F+E+IFGG++ I +   ETC +C G+GAK+     +C  C G G V +  RTPFG  +QVS C  C G+G++I + C  CGG G  Q  + +K+ IP GV +G  ++
Sbjct:   27 LARQYHPDVNKDPGAEEKFKEINRAYEVLSEPETRARYDRFGEAGVSGA--GAAGADYGDMGGFADIFETIFSGFGGMGTGATGGGRRRSGPMRGD-------DLRLDLKLDFKEAIFGGEKEIRIPHLETCKTCSGSGAKAGTSANTCGTCNGTGQVRRATRTPFGSFAQVSVCPTCNGEGQVIAEKCESCGGAGRKQETKKLKITIPAGVDSGTRLR 236          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNJB (Chaperone protein dnaJ OS=Synechococcus sp. GN=dnaJ PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.100e-42
Identity = 85/214 (39.72%), Postives = 121/214 (56.54%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPD+NK PGAEE+FKEI+ AYEVLSD+E ++ YDRFGEAG++G     +  + G   F                   A               D+R+DL L F E+IFGG++ I +S  E C+ CGG+GAK    +++C  C G G V +  RTPFG  +QVS C  CGG G+++ + C  C G G  Q+ + +++ IP GV +G  ++
Sbjct:   27 LARKYHPDVNKEPGAEERFKEINRAYEVLSDNELKARYDRFGEAGLSGA----AAAASGFQDFAGMGGFADIFESFFTNFAGAGASYARSRQGPVRGDDLRFDLKLEFLEAIFGGEKQIRISHLEVCNVCGGSGAKPGTEVKTCPTCGGSGQVRRATRTPFGNFTQVSVCPTCGGSGQVLEEPCYNCNGEGLAQTTKKLRINIPAGVDSGTRLR 236          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNJA (Chaperone protein dnaJ OS=Synechococcus sp. (strain JA-3-3Ab) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.178e-41
Identity = 87/217 (40.09%), Postives = 123/217 (56.68%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQ--GVDPF-ELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPD+NK PGAE++FKEI+ AYEVLSDDE R+ YDRFGEAG++G     S      G+  F +L+ +              +               D+R+DL L F E+IFGG++ I +S  E C  CGG+GAK    ++ C  C G G V +  RTPFG  +QVS C  CGG G+++ + C  C G G  Q+ + +++ IP GV +G  ++
Sbjct:   27 LARKYHPDVNKEPGAEDRFKEINRAYEVLSDDELRARYDRFGEAGLSGAAAAASGFQDFAGIGGFADLFESFFTNFAGGGVGYSRSRQGPVRGD-------DLRFDLKLEFLEAIFGGEKQIRISHLEVCPVCGGSGAKPGTDVKVCPTCGGAGQVRRATRTPFGNFTQVSICPTCGGAGRVLEEPCYNCNGEGLAQTTKKLRINIPAGVDSGTRLR 236          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_ANAVT (Chaperone protein dnaJ OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.010e-41
Identity = 88/218 (40.37%), Postives = 120/218 (55.05%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE---YDGLSNTSQGVDPFE-LYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPD+NK PGAEE+FKEI+ AYEVLS+ E R+ YDRFG  G++G    +  +S+     D FE ++S                               D+R DL L F E++FGG++ I +S  ETC++C G+GAK     ++C  C G G V +  RTPFG  +QVSTC  C G G +I D C  C G G  Q  + +K+ IP GV NG  ++
Sbjct:   27 LARKYHPDVNKEPGAEERFKEINRAYEVLSEPETRARYDRFGPEGVSGAGVGFQDMSDMGGFADIFESIFSGFAGGGMGGPTQQRRRGGPARGD--------DLRLDLKLDFREAVFGGEKEIRISHLETCETCSGSGAKPGTRPRTCSTCSGSGQVRRVTRTPFGSFTQVSTCPTCNGTGMVIEDKCDACDGKGTNQVTKKLKITIPAGVDNGTRLR 236          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_ANASP (Chaperone protein dnaJ OS=Anabaena sp. (strain PCC 7120) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.010e-41
Identity = 88/218 (40.37%), Postives = 120/218 (55.05%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE---YDGLSNTSQGVDPFE-LYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPD+NK PGAEE+FKEI+ AYEVLS+ E R+ YDRFG  G++G    +  +S+     D FE ++S                               D+R DL L F E++FGG++ I +S  ETC++C G+GAK     ++C  C G G V +  RTPFG  +QVSTC  C G G +I D C  C G G  Q  + +K+ IP GV NG  ++
Sbjct:   27 LARKYHPDVNKEPGAEERFKEINRAYEVLSEPETRARYDRFGPEGVSGAGVGFQDMSDMGGFADIFESIFSGFAGGGMGGPTQQRRRGGPARGD--------DLRLDLKLDFREAVFGGEKEIRISHLETCETCSGSGAKPGTRPRTCSTCSGSGQVRRVTRTPFGSFTQVSTCPTCNGTGMVIEDKCDTCDGKGTNQVTKKLKITIPAGVDNGTRLR 236          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNPX (Chaperone protein dnaJ OS=Synechococcus sp. (strain WH8102) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.428e-41
Identity = 85/213 (39.91%), Postives = 119/213 (55.87%), Query Frame = 1
Query:   58 QYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQG--VDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            +YHPDINK PGAE++FKEI  AYEVLSD + R+ YD+FGEAG+ G          G   D FE +                                D+RYDL + FE+++FG ++ I++   ETCD+CGG+GAK+ +   +C  C G G V +  RTPFG  +QV+ C  CGG G++I D C  CGG G  Q ++ +++ IP GV  G  ++
Sbjct:   29 KYHPDINKEPGAEDRFKEIGRAYEVLSDPQTRARYDQFGEAGLGGAAGASDMGDMGGFADLFETFFQGFGGPGGAAAGRSGRRGPQQGD--------DLRYDLTIDFEQAVFGQEQEIKIPHLETCDTCGGSGAKAGSGPTTCGTCGGAGQVRRATRTPFGSFTQVAECPNCGGTGQVIADPCNACGGQGVRQVRKKLRINIPAGVDTGTRLR 233          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_MICAN (Chaperone protein dnaJ OS=Microcystis aeruginosa (strain NIES-843) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.428e-41
Identity = 85/216 (39.35%), Postives = 117/216 (54.17%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQG--VDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPD+NK PGAEE FKEI+ AYE+LS+ E R+ YDRFGEAG++G   G    + G   D FE   +                              D+R D  L F E++FGG++ I +   ETC +C G+GA+     ++C  C G G V +  RTPFG  +QVS C  C G G++I + C  CGG+G  Q  + +K+ IP GV NG  ++
Sbjct:   27 LARKYHPDVNKEPGAEEHFKEINRAYEILSEPETRNRYDRFGEAGVSGGAAGFDPDNMGGFADIFETIFSGFGGMGGQATARRRTGPTRGE---------DLRLDFRLKFREAVFGGEKEIRIRHLETCQTCKGSGARPGTSSRTCTTCSGTGQVRRATRTPFGTFAQVSVCPTCDGAGEVIEEKCDVCGGSGRRQETKKLKITIPAGVDNGMKLR 233          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNP6 (Chaperone protein dnaJ OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.847e-41
Identity = 86/218 (39.45%), Postives = 122/218 (55.96%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE----YDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPD+NK PGAE+KFKEI+ AYEVLS+ E R+ YD+FGEAG++G     +    +     D FE + +                              D+R DL L F ++IFGG++ I V+  ETC +C G+GAK+    Q+C  C G G V +  RTPFG  +QVS C  C G G++I+D C  CGG G ++  + +K+ IP GV +G  ++
Sbjct:   27 LARKYHPDVNKEPGAEDKFKEINRAYEVLSEPETRARYDQFGEAGVSGAGAAGFQDFGDMGGFADIFETFFSGFGGMGGQQASARRRGPTRGE---------DLRLDLKLDFRDAIFGGEKEIRVTHEETCGTCQGSGAKAGTRPQTCTTCGGAGQVRRATRTPFGSFTQVSVCPTCEGSGQMIVDKCDDCGGAGRLRRPKKLKINIPAGVDSGTRLR 235          
The following BLAST results are available for this feature:
BLAST of FC873460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_THEEB6.675e-4541.36Chaperone protein dnaJ OS=Thermosynechococcus elon... [more]
DNAJ_CYAP43.663e-4341.01Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_SYNP21.066e-4241.10Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNAJ_SYNJB3.100e-4239.72Chaperone protein dnaJ OS=Synechococcus sp. GN=dna... [more]
DNAJ_SYNJA1.178e-4140.09Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNAJ_ANAVT2.010e-4140.37Chaperone protein dnaJ OS=Anabaena variabilis (str... [more]
DNAJ_ANASP2.010e-4140.37Chaperone protein dnaJ OS=Anabaena sp. (strain PCC... [more]
DNAJ_SYNPX3.428e-4139.91Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNAJ_MICAN3.428e-4139.35Chaperone protein dnaJ OS=Microcystis aeruginosa (... [more]
DNAJ_SYNP65.847e-4139.45Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BA03FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873460 ID=FC873460; Name=FC873460; organism=Citrus clementina; type=EST; length=691bp
TAACGGCACCAGCTATAATCTTTTTGATTTTGTTAATGTCTTCTTGTTTT
GATTATGCAGTATCATCCGGATATCAACAAGAGTCCTGGAGCTGAAGAGA
AGTTCAAAGAGATAAGTTCTGCGTATGAGGTCCTTTCAGATGATGAGAAA
AGATCTGTATATGATCGCTTTGGTGAGGCAGGTATAACTGGAGAATATGA
TGGATTGAGCAACACTTCACAGGGGGTGGATCCTTTTGAATTATATAGTG
CATTCTTTGGTGGTTCAGATGGGCTCTTTGGAGGAGTGGGTGAGGCCGGA
GGCATTAACTTCAATTTTGGAAACAAAGGAAATTTTGGTCTTGACATTCG
GTATGACCTGCATTTGAGCTTTGAAGAATCAATTTTTGGAGGACAGCGTG
GGATTGAAGTTTCTTGTTTTGAAACATGTGATAGTTGTGGTGGAACTGGT
GCCAAATCTAGTAATTGCATACAATCATGTAAAGCTTGTTGGGGTAGAGG
AGGAGTACTGAAAACTCAGAGAACACCATTTGGATTAATCTCACAGGTAT
CTACATGCTCTAAGTGTGGTGGTGATGGTAAGATAATAATTGATCATTGC
CGAAGATGTGGTGGTAATGGTGAAGTACAGTCAAAAAGAAGTATGAAAGT
GGTTATCCCACCTGGTGTTAGTAACGGAGCCACCATGCAAA
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