FC873658

Overview
NameFC873658
Unique NameFC873658
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length811
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873658 vs. ExPASy Swiss-Prot
Match: SMT1_ARATH (Cycloartenol-C-24-methyltransferase OS=Arabidopsis thaliana GN=SMT1 PE=2 SV=1)

HSP 1 Score: 400.979 bits (1029), Expect = 4.128e-111
Identity = 185/208 (88.94%), Postives = 200/208 (96.15%), Query Frame = 2
Query:  188 DLASGVGGKIDKTEVLSAVEKYEKYHVCYGGEEEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPN 811
            DLAS +GGKIDK++VL+AVEKYE+YHV +GG EEERKANYTDMVNKYYDL TSFYE+GWGESFHFA RWKGESL+ESIKRHEHFLALQLG++ GQKVLDVGCGIGGPLREIARFS++ VTGLNNNEYQITRGKELNR AGVDKTCNFVKADFMKMPFP+NSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWC+TDAFDP+
Sbjct:    2 DLASNLGGKIDKSDVLTAVEKYEQYHVFHGGNEEERKANYTDMVNKYYDLATSFYEYGWGESFHFAQRWKGESLRESIKRHEHFLALQLGIQPGQKVLDVGCGIGGPLREIARFSNSVVTGLNNNEYQITRGKELNRLAGVDKTCNFVKADFMKMPFPENSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCMTDAFDPD 209          
BLAST of FC873658 vs. ExPASy Swiss-Prot
Match: SMT1_ORYSJ (Cycloartenol-C-24-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=Smt1-1 PE=2 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 7.540e-105
Identity = 177/215 (82.33%), Postives = 193/215 (89.77%), Query Frame = 2
Query:  167 MSKAGAFDLASGVGGKIDKTEVLSAVEKYEKYHVCYGGEEEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPN 811
            MS++GA DLASG+GGKI K EV SAV++YEKYH  YGG+EE RK+NYTDMVNKYYDL TSFYE+GWGESFHFA RW GESL+ESIKRHEHFLALQLG+K G KVLDVGCGIGGPLREIA+FS  SVTGLNNNEYQITRGKELNR AGV  TC+FVKADFMKMPF DN+FDAVYAIEATCHAPD  GCYKEIYRVLKPGQCFA YEWC+TD ++PN
Sbjct:    1 MSRSGAMDLASGLGGKITKDEVKSAVDEYEKYHGYYGGKEEARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGVKPGMKVLDVGCGIGGPLREIAKFSLASVTGLNNNEYQITRGKELNRVAGVSGTCDFVKADFMKMPFSDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYEPN 215          
BLAST of FC873658 vs. ExPASy Swiss-Prot
Match: SMT1_DICDI (Probable cycloartenol-C-24-methyltransferase 1 OS=Dictyostelium discoideum GN=smt1 PE=1 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 7.140e-63
Identity = 107/174 (61.49%), Postives = 131/174 (75.29%), Query Frame = 2
Query:  287 EERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDP 808
            + RK NYT MVN +YDL T FYEFGWG+SFHFA R K ES + SI RHE ++A QLGL  G KV+D+GCG+GGP+R IARFS  +V GLNNNEYQI RGK LN  AG+   C+F+KADFM +P  DN++D  Y IEATCHAPD  G YKE++R++KPG  F  YEW +T+ F+P
Sbjct:   52 QARKNNYTHMVNTFYDLATDFYEFGWGQSFHFATRHKYESFEASIARHEMYMAHQLGLFPGMKVIDIGCGVGGPMRTIARFSGANVVGLNNNEYQIQRGKRLNESAGLSHLCSFIKADFMHVPVEDNTYDCAYQIEATCHAPDLVGLYKEVFRIVKPGGLFGGYEWIMTNKFNP 225          
BLAST of FC873658 vs. ExPASy Swiss-Prot
Match: ERG6_YARLI (Sterol 24-C-methyltransferase OS=Yarrowia lipolytica GN=ERG6 PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 9.986e-57
Identity = 97/175 (55.43%), Postives = 126/175 (72.00%), Query Frame = 2
Query:  281 EEEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFD 805
            +E+ R  +Y  +   YY+LVT FYE+GWG SFHF+  +KGE+ +++  RHEH+LA ++G++ G KVLDVGCG+GGP REIARF+  ++ GLNNN+YQ+ RG   +   G      +VK DFM+M FPDNSFDAVYAIEAT HAP   G Y EI+RVLKPG  F  YEW +TD +D
Sbjct:   67 DEQGRIEDYAGLTKHYYNLVTDFYEYGWGSSFHFSRYYKGEAFRQATARHEHYLAYKMGIQPGMKVLDVGCGVGGPAREIARFTGANIVGLNNNDYQVERGTHYSEVQGFGDQVTYVKGDFMQMDFPDNSFDAVYAIEATVHAPVLEGVYSEIFRVLKPGGVFGVYEWVMTDEYD 241          
BLAST of FC873658 vs. ExPASy Swiss-Prot
Match: ERG6_YEAST (Sterol 24-C-methyltransferase OS=Saccharomyces cerevisiae GN=ERG6 PE=1 SV=4)

HSP 1 Score: 219.164 bits (557), Expect = 2.225e-56
Identity = 100/176 (56.82%), Postives = 125/176 (71.02%), Query Frame = 2
Query:  284 EEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPN 811
            EE R  +Y +  + YY++VT FYE+GWG SFHF+  +KGES   SI RHEH+LA + G++ G  VLDVGCG+GGP REIARF+  +V GLNNN+YQI + K   +   +    +FVK DFMKM F +N+FD VYAIEATCHAP   G Y EIY+VLKPG  FA YEW +TD +D N
Sbjct:   59 EERRLEDYNEATHSYYNVVTDFYEYGWGSSFHFSRFYKGESFAASIARHEHYLAYKAGIQRGDLVLDVGCGVGGPAREIARFTGCNVIGLNNNDYQIAKAKYYAKKYNLSDQMDFVKGDFMKMDFEENTFDKVYAIEATCHAPKLEGVYSEIYKVLKPGGTFAVYEWVMTDKYDEN 234          
BLAST of FC873658 vs. ExPASy Swiss-Prot
Match: ERG6_ASHGO (Sterol 24-C-methyltransferase OS=Ashbya gossypii GN=ERG6 PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.225e-56
Identity = 101/174 (58.05%), Postives = 125/174 (71.84%), Query Frame = 2
Query:  284 EEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFD 805
            EE R A+Y +  + YY++VT FYE+GWG SFHF+  + GES   S+ RHEH+LA + G+ SG  VLDVGCG+GGP REIARF+   V GLNNN+YQI +GK  +R  G+    ++VK DFM M FPD +FD VYAIEATCHAP   G Y EIYRVLKPG  FA YEW +T+ +D
Sbjct:   60 EERRLADYNESTHSYYNVVTDFYEYGWGASFHFSRFYTGESFAMSMARHEHYLAHRAGITSGDLVLDVGCGVGGPAREIARFTGCRVVGLNNNDYQIMKGKHYSRKLGLGDQVSYVKGDFMNMDFPDATFDKVYAIEATCHAPSFEGVYGEIYRVLKPGGVFAVYEWVMTENYD 233          
BLAST of FC873658 vs. ExPASy Swiss-Prot
Match: ERG6_NEUCR (Sterol 24-C-methyltransferase OS=Neurospora crassa GN=B24P7.240 PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.639e-54
Identity = 98/175 (56.00%), Postives = 117/175 (66.86%), Query Frame = 2
Query:  281 EEEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFD 805
            + E R   Y  +   YY+L T  YE+GWG+ FHF     GES  ++I RHEH+LA Q+G+K   KVLDVGCG+GGP REIA+F+   +TGLNNN+YQI R        G+     FVK DFM+M FPDNSFDAVYAIEAT HAP   G Y EIYRVLKPG  F  YEW +TD +D
Sbjct:   67 DREARTKEYATLTRHYYNLATDIYEYGWGQCFHFCRYSPGESFYQAIARHEHYLAAQIGIKKDMKVLDVGCGVGGPAREIAKFTDAHITGLNNNDYQIDRATHYAVRDGLSGQLKFVKGDFMQMSFPDNSFDAVYAIEATVHAPKLEGVYGEIYRVLKPGGTFGVYEWLMTDNYD 241          
BLAST of FC873658 vs. ExPASy Swiss-Prot
Match: ERG6_KLULA (Sterol 24-C-methyltransferase OS=Kluyveromyces lactis GN=ERG6 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.058e-54
Identity = 99/198 (50.00%), Postives = 133/198 (67.17%), Query Frame = 2
Query:  218 DKTEVLSAVEKYEKYHVCYGGEEEERKA--NYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFD 805
            +K+    AV KY K+       + ER+   +Y +  + YY++VT FYE+GWG SFHF+  +KGES   S+ RHEH+LA + G+K    +LDVGCG+GGP R I+RF+  ++ GLNNN+YQI +     +   +D   +FVK DFMKM F +N+FD+VYAIEATCHAP   G Y EIY+VLKPG  FA YEW +TD +D
Sbjct:   35 NKSAQTEAVAKYLKHWDGKTDADAERRRLEDYNESTHSYYNVVTDFYEYGWGSSFHFSRFFKGESFSASVARHEHYLAYKAGIKENDLILDVGCGVGGPARTISRFTGCNIIGLNNNDYQIQKANYYAKRDHLDSKLSFVKGDFMKMEFDENTFDSVYAIEATCHAPTFEGVYGEIYKVLKPGGTFAVYEWVMTDKYD 232          
BLAST of FC873658 vs. ExPASy Swiss-Prot
Match: ERG6_SCHPO (Sterol 24-C-methyltransferase OS=Schizosaccharomyces pombe GN=SPBC16E9.05 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.763e-53
Identity = 100/191 (52.36%), Postives = 128/191 (67.02%), Query Frame = 2
Query:  245 EKYEKYHVCYGGEEEERKAN----YTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFD 805
            E +E +   +  E EE +A     Y  +VN YYDL T  YE+GW +SFHF+  +KGE+  +SI RHEH+LA ++G+K G +VLDVGCG+GGP REI  F+  ++ GLNNN+YQI+R         +DK   FVK DFM MPF DN+FD VYAIEAT HAP   G Y EI+RVLKPG  F  YEW ++D +D
Sbjct:   47 EYFEFWDRNHENESEEDRARRIDGYKSVVNSYYDLATDLYEYGWSQSFHFSRFYKGEAFAQSIARHEHYLAYRMGIKPGSRVLDVGCGVGGPAREITEFTGCNLVGLNNNDYQISRCNNYAVKRNLDKKQVFVKGDFMHMPFEDNTFDYVYAIEATVHAPSLEGVYGEIFRVLKPGGVFGVYEWVMSDDYD 237          
BLAST of FC873658 vs. ExPASy Swiss-Prot
Match: ERG6_CANGA (Sterol 24-C-methyltransferase OS=Candida glabrata GN=ERG6 PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 8.748e-53
Identity = 94/176 (53.41%), Postives = 121/176 (68.75%), Query Frame = 2
Query:  284 EEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPN 811
            E+ R  +Y +  + YY++VT FYE+GWG SFHF+  +KGE+ Q ++ RHE +LA   G+K G  VLDVGCG+GGP R IARF+  ++ GLNNN+YQI + K   +   +    +FVK DFM M F  NSFD VYAIEATCHAP   G Y EIY+VLKPG  FA YEW +T+ +D N
Sbjct:   59 EDRRLEDYNEATHSYYNVVTDFYEYGWGSSFHFSRFYKGENFQAAMARHEQYLAYMAGIKKGDLVLDVGCGVGGPARTIARFTGCNIIGLNNNDYQIQKAKYYAKKYNLQDHMDFVKGDFMNMEFEPNSFDKVYAIEATCHAPKLEGVYGEIYKVLKPGGTFAVYEWVMTENYDEN 234          
The following BLAST results are available for this feature:
BLAST of FC873658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
SMT1_ARATH4.128e-11188.94Cycloartenol-C-24-methyltransferase OS=Arabidopsis... [more]
SMT1_ORYSJ7.540e-10582.33Cycloartenol-C-24-methyltransferase 1 OS=Oryza sat... [more]
SMT1_DICDI7.140e-6361.49Probable cycloartenol-C-24-methyltransferase 1 OS=... [more]
ERG6_YARLI9.986e-5755.43Sterol 24-C-methyltransferase OS=Yarrowia lipolyti... [more]
ERG6_YEAST2.225e-5656.82Sterol 24-C-methyltransferase OS=Saccharomyces cer... [more]
ERG6_ASHGO2.225e-5658.05Sterol 24-C-methyltransferase OS=Ashbya gossypii G... [more]
ERG6_NEUCR4.639e-5456.00Sterol 24-C-methyltransferase OS=Neurospora crassa... [more]
ERG6_KLULA6.058e-5450.00Sterol 24-C-methyltransferase OS=Kluyveromyces lac... [more]
ERG6_SCHPO1.763e-5352.36Sterol 24-C-methyltransferase OS=Schizosaccharomyc... [more]
ERG6_CANGA8.748e-5353.41Sterol 24-C-methyltransferase OS=Candida glabrata ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1DF11FM2 AbsDev Citrus clementina cDNA clone KN0AAI1DF11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873658 ID=FC873658; Name=FC873658; organism=Citrus clementina; type=EST; length=811bp
TGTTACATTAAAAAGATGTTTGTATTTTTTCATTTAAGCTGTCTGTACTC
TACTCTGTAGATTCCAAAGCTCCTTCAGTCTTCACACACAACAGAAACAC
ACCTTCTCTCTGTTCCGAATTCTCCTTCTCTTTTTGCGGCTCTTTCAACA
TCGGTATATTGCGAGAATGTCGAAGGCTGGAGCTTTTGATTTGGCTTCTG
GAGTGGGCGGAAAGATTGATAAAACCGAAGTGCTCTCCGCCGTCGAAAAG
TATGAGAAGTATCATGTCTGTTATGGAGGTGAAGAGGAAGAGAGAAAAGC
TAACTACACTGACATGGTTAATAAATATTATGATCTTGTTACCAGCTTTT
ATGAGTTTGGCTGGGGGGAGTCATTCCATTTTGCACCAAGATGGAAAGGA
GAGTCTCTTCAGGAGAGTATCAAGCGACATGAGCACTTCCTTGCTTTGCA
ACTTGGCCTTAAATCTGGGCAGAAGGTTTTGGATGTTGGATGTGGAATTG
GTGGACCCTTGAGAGAAATTGCTCGATTCAGCTCAACATCAGTTACTGGG
TTGAACAACAATGAGTATCAGATAACAAGAGGAAAGGAATTAAACCGCTT
TGCAGGAGTGGACAAGACCTGCAACTTTGTAAAGGCTGACTTCATGAAAA
TGCCATTTCCTGACAATAGTTTTGATGCTGTGTATGCAATTGAAGCAACC
TGTCATGCTCCAGATGCATATGGATGCTACAAAGAGATTTACAGAGTATT
AAAGCCTGGCCAATGTTTTGCTGCATATGAATGGTGCTTGACTGATGCGT
TTGATCCAAAC
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