FC873700

Overview
NameFC873700
Unique NameFC873700
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length861
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15543 contig Ccv1_Contig15543:282..1142. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873700 vs. ExPASy Swiss-Prot
Match: CAH1_FLALI (Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.634e-53
Identity = 108/217 (49.77%), Postives = 140/217 (64.52%), Query Frame = 1
Query:   34 QVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDE--EDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDY 675
            Q+     A + +   D  +++K  F+ FK +KF+ N   Y  LA GQ+PKFMV AC+DSRVCPS++L FQPGEAF+VRNVANMVPP +    S   AA+E+AV  +KV+ I VIGHSRCGGI  LM+  DE      FI  WV V   A+    A  +    D QC  CEKE+VN SL NLLTYP++ + +R   L+L GG+Y+FV+ TFE W LD+
Sbjct:  106 QITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDF 322          
BLAST of FC873700 vs. ExPASy Swiss-Prot
Match: CAHX_FLABR (Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.255e-52
Identity = 108/217 (49.77%), Postives = 140/217 (64.52%), Query Frame = 1
Query:   34 QVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDE--EDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDY 675
            Q+     A + +   D  +++K  F+ FK +KF+ N   Y  LA GQ+PKFMV AC+DSRVCPS++L FQPGEAF+VRNVANMVPP +    S   AA+E+AV  +KV+ I VIGHSRCGGI  LM+  DE      FI  WV V   A+    A  +    D QC  CEKE+VN SL NLLTYP++ + +R   L+L GG+Y+FV+ TFE W LD+
Sbjct:  106 QITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDF 322          
BLAST of FC873700 vs. ExPASy Swiss-Prot
Match: CAHX_FLAPR (Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.639e-52
Identity = 108/217 (49.77%), Postives = 140/217 (64.52%), Query Frame = 1
Query:   34 QVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDE--EDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDY 675
            Q+     A + +   D  +++K  F+ FK +KF+ N   Y  LA GQ+PKFMV AC+DSRVCPS++L FQPGEAF+VRNVANMVPP +    S   AA+E+AV  +KV+ I VIGHSRCGGI  LM+  DE      FI  WV V   A+    A  +    D QC  CEKE+VN SL NLLTYP++ + +R   L+L GG+Y+FV+ TFE W LD+
Sbjct:  105 QITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDF 321          
BLAST of FC873700 vs. ExPASy Swiss-Prot
Match: CAHX_FLABI (Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 2.141e-52
Identity = 108/217 (49.77%), Postives = 140/217 (64.52%), Query Frame = 1
Query:   34 QVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDE--EDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDY 675
            Q+     A + +   D  +++K  F+ FK +KF+ N   Y  LA GQ+PKFMV AC+DSRVCPS++L FQPGEAF+VRNVANMVPP +    S   AA+E+AV  +KV+ I VIGHSRCGGI  LM+  DE      FI  WV V   A+    A  +    D QC  CEKE+VN SL NLLTYP++ + +R   L+L GG+Y+FV+ TFE W LD+
Sbjct:  106 QITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNKTLALKGGHYDFVNGTFELWALDF 322          
BLAST of FC873700 vs. ExPASy Swiss-Prot
Match: CAH2_ARATH (Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 6.229e-52
Identity = 104/215 (48.37%), Postives = 145/215 (67.44%), Query Frame = 1
Query:   43 KLETAAEVENEC-DFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKVENILVIGHSRCGGIHALMS--MQDEEDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDY 675
            +L+ A+  +++  D  +++K  F++FKK+K+  N   Y  LA GQ+PK+MV AC+DSRVCPS++L F PG+AF+VRN+ANMVPP +    +   AA+E+AV  +KVENI+VIGHS CGGI  LMS  +       FI  WV +   A+    A S S +F+ QC  CE+E+VN SL NLLTYP++ E V  G L+L GGYY+FV+ +FE W L +
Sbjct:   37 ELQAASSSDSKSFDPVERIKEGFVTFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVLAESESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLALKGGYYDFVNGSFELWELQF 251          
BLAST of FC873700 vs. ExPASy Swiss-Prot
Match: CAHC_ARATH (Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 5.273e-51
Identity = 103/214 (48.13%), Postives = 137/214 (64.02%), Query Frame = 1
Query:   79 DFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKVENILVIGHSRCGGIHALMS--MQDEEDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDYDGSNLKESKEVA 711
            D  + +K  F+ FKK+K+  N   Y  LA GQ+PK+MV AC+DSRVCPS++L FQPG+AF+VRN+ANMVPP +        AA+E+AV  +KVENI+VIGHS CGGI  LMS  +       FI  WV +   A+    +     +F+ QC  CE+E+VN SL NLLTYP++ E +  G L+L GGYY+FV   FE W L++  S     K+VA
Sbjct:  127 DPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKGGYYDFVKGAFELWGLEFGLSETSSVKDVA 340          
BLAST of FC873700 vs. ExPASy Swiss-Prot
Match: CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 6.887e-51
Identity = 102/198 (51.52%), Postives = 135/198 (68.18%), Query Frame = 1
Query:   91 KMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQD--EEDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDY 675
            ++K  F+ FKK+K+ +N   Y  L+ GQAPKFMV AC+DSRVCPS++L FQPGEAF+VRN+ANMVP  +    +   AA+E+AV  +KVENI+VIGHS CGGI  LMS  D       FI  WV +   A+    A   + +F  QC+HCEKE+VN SL NLLTYP++ + +    L+L GGYY+FV+ +FE W L+Y
Sbjct:  114 RIKEGFIKFKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVRNIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPDAGPTTTDFIEDWVKICLPAKHKVLAEHGNATFAEQCTHCEKEAVNVSLGNLLTYPFVRDGLVKKTLALQGGYYDFVNGSFELWGLEY 311          
BLAST of FC873700 vs. ExPASy Swiss-Prot
Match: CAHC_PEA (Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.887e-51
Identity = 103/199 (51.76%), Postives = 135/199 (67.84%), Query Frame = 1
Query:   88 DKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDEEDPS--FIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDY 675
            +++K  FL FKK+K+ +N   Y  LA GQ+P FMV AC+DSRVCPS++L FQPGEAF+VRNVAN+VPP +    + T AA+E+AV  +KV NI+VIGHS CGGI  L+S   +   S  FI  WV +G  A+   KA      F   C+HCEKE+VN SL NLLTYP++ E +    L+L GGYY+FV  +FE W L++
Sbjct:  122 ERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEF 320          
BLAST of FC873700 vs. ExPASy Swiss-Prot
Match: CAHC_TOBAC (Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.216e-49
Identity = 103/220 (46.82%), Postives = 143/220 (65.00%), Query Frame = 1
Query:   34 QVDKLETAAEVENECDFFDKMKHR---FLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCE-SGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSM--QDEEDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDY 675
            +VD++    +  +    FD ++H    F+ FK +K+ +N   Y  L+ GQ+PKFMV AC+DSRVCPS++L FQPGEAF+VRN+ANMVP  + +  S   AA+E+AV  +KVENI+VIGHS CGGI  LMS+     E  +FI  WV +G  A+   +       F  QC+ CEKE+VN SL NLLTYP++ E +    L+L GG+Y+FV+  FE W L++
Sbjct:   94 RVDQITAELQSSDGSKPFDPVEHMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIEDWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGHYDFVNGGFELWGLEF 313          
BLAST of FC873700 vs. ExPASy Swiss-Prot
Match: CAHC_HORVU (Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.199e-48
Identity = 97/195 (49.74%), Postives = 135/195 (69.23%), Query Frame = 1
Query:   88 DKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPP-CESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDEEDPS--FIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKW 663
            +++K  F  FK + + +  + ++ L  GQAPK+MV ACADSRVCPS  LG +PGEAF +RN+ANMVP  C++  +   +A+E+AV ++KVE I+VIGHSRCGGI AL+S++D  D S  F+  WV +G  A+   +   +S+ FD QC+  EKE+VN SL NLLTYP+++E V  G L L GG+Y+FV   FE W
Sbjct:  128 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 322          
The following BLAST results are available for this feature:
BLAST of FC873700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
CAH1_FLALI5.634e-5349.77Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=... [more]
CAHX_FLABR1.255e-5249.77Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1[more]
CAHX_FLAPR1.639e-5249.77Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1[more]
CAHX_FLABI2.141e-5249.77Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2[more]
CAH2_ARATH6.229e-5248.37Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA... [more]
CAHC_ARATH5.273e-5148.13Carbonic anhydrase, chloroplastic OS=Arabidopsis t... [more]
CAHC_SPIOL6.887e-5151.52Carbonic anhydrase, chloroplastic OS=Spinacia oler... [more]
CAHC_PEA6.887e-5151.76Carbonic anhydrase, chloroplastic OS=Pisum sativum... [more]
CAHC_TOBAC2.216e-4946.82Carbonic anhydrase, chloroplastic OS=Nicotiana tab... [more]
CAHC_HORVU3.199e-4849.74Carbonic anhydrase, chloroplastic OS=Hordeum vulga... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CE09FM1 AbsDev Citrus clementina cDNA clone KN0AAI3CE09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873700 ID=FC873700; Name=FC873700; organism=Citrus clementina; type=EST; length=861bp
TGGAGACATTCTGAGGGAATCACTCAAGAATTTCAAGTTGACAAGCTGGA
GACTGCAGCAGAAGTTGAAAATGAATGTGATTTTTTTGATAAGATGAAAC
ATCGCTTTTTGAGCTTCAAAAAACAGAAATTCATGGAAAATTTAGAGCAT
TACCAAAATCTTGCGGATGGTCAAGCACCAAAGTTTATGGTGATTGCTTG
TGCGGACTCTAGAGTTTGTCCCTCAAACATCCTGGGATTTCAACCAGGAG
AGGCATTTATTGTCCGCAATGTTGCAAATATGGTGCCCCCGTGTGAGAGT
GGGCCCTCAGAAACAAATGCTGCACTGGAATTTGCCGTTAATTCTGTTAA
AGTTGAAAACATTTTAGTCATTGGCCACAGCCGCTGTGGAGGCATTCATG
CCCTTATGAGCATGCAGGATGAAGAAGATCCAAGTTTTATTAGAAGTTGG
GTTCTTGTGGGGAAGAATGCAAGGTTAAACACAAAAGCTGCTTCTTCCAG
CCTTAGCTTTGACCATCAGTGTTCACACTGTGAGAAGGAATCTGTAAATT
GTTCATTGTTAAACCTGCTCACTTATCCATGGATAGAAGAAAAAGTTAGG
GCAGGTGCTCTGTCTCTTCATGGTGGCTACTATAACTTCGTTGACTGCAC
ATTTGAGAAATGGACCCTGGATTATGATGGGAGCAATTTGAAGGAAAGTA
AAGAGGTTGCATTTAGAAACCGTTCCTTTTGGAGCTGATTTCCACTTGCA
TCATCTCCATGAAATAAGTTTCTTTTCTTTTTTCTCTTCTATTGTATGTG
ATTTATTCATAATTGTCGGACAAATGAAAAATAATGTTATCCCCTTTCCA
GGGGAATAACT
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