FC873795

Overview
NameFC873795
Unique NameFC873795
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig224 contig Ccv1_Contig224:277..949. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873795 vs. ExPASy Swiss-Prot
Match: PFPA_RICCO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 3.319e-86
Identity = 147/176 (83.52%), Postives = 167/176 (94.89%), Query Frame = 1
Query:    1 GSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRWSQNPGASSIGRPAINPATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTLCVEDRDYMGRIKELQKYLDEVRTIVKPGCSQEVLKAALSVMASVTEVLSAMSAS 528
            GSLPSKFDCDYAYVLGHICYH+LAAGLNGYMAT TNLKNP NKWRCGAAPI +MMTVKRW+QNPGA+SIG+PAI+PA VD++GKAYELLR NA +FL+DDLYRNPGP+QF+GPGADAK +TLCVED+DYMGRIK+LQ+YLD+VRTIVKPGCSQEVLKAALSVMASVT+VL  MS++
Sbjct:  434 GSLPSKFDCDYAYVLGHICYHVLAAGLNGYMATATNLKNPVNKWRCGAAPIAAMMTVKRWAQNPGATSIGKPAIHPAAVDLKGKAYELLRLNAVKFLMDDLYRNPGPLQFEGPGADAKPITLCVEDQDYMGRIKKLQEYLDKVRTIVKPGCSQEVLKAALSVMASVTDVLLTMSST 609          
BLAST of FC873795 vs. ExPASy Swiss-Prot
Match: PFPA_SOLTU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.595e-80
Identity = 139/181 (76.80%), Postives = 165/181 (91.16%), Query Frame = 1
Query:    1 GSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRWSQNPGASSIGRPAINPATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTLCVEDRDYMGRIKELQKYLDEVRTIVKPGCSQEVLKAALSVMASVTEVLSAMSASGGQTT 543
            GSLPSKFDCDYAYVLGH+CYHILAAGLNGYMAT+TNLKNPANKW CGA+PI++MMTVKR+ + PG +SIG PA++PATVD+RGK+YELL QNAT+FLLDD+YRNPGP+QFDGPGADAKA +L VED DY+G IK+LQ+YLD+VRTIVKPGCSQ+VLKAALS MASVT++LS +S+    +T
Sbjct:  434 GSLPSKFDCDYAYVLGHVCYHILAAGLNGYMATITNLKNPANKWHCGASPISAMMTVKRYGRGPGKASIGVPALHPATVDLRGKSYELLSQNATKFLLDDVYRNPGPLQFDGPGADAKAGSLVVEDADYIGAIKKLQEYLDKVRTIVKPGCSQDVLKAALSAMASVTDILSVISSPSSVST 614          
BLAST of FC873795 vs. ExPASy Swiss-Prot
Match: PFPB_RICCO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Ricinus communis GN=PFP-BETA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.426e-14
Identity = 42/123 (34.15%), Postives = 65/123 (52.85%), Query Frame = 1
Query:    7 LPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRWSQNPGASSIGRPAINPATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTLCVE 375
            LP+ FD  Y Y LG+    +L +G  G +++V NL  P  +W  G   +TS+M V+R           +P I  A V++ G  ++        + L + Y +PGP+QF GPG+DA + TL +E
Sbjct:  431 LPTNFDSTYCYALGYAAGALLHSGKTGLISSVGNLGAPVAEWTVGGTALTSLMDVER------RHGKFKPVIKKAMVELEGAPFKKFASLREEWALKNRYVSPGPIQFMGPGSDAASHTLLLE 547          
BLAST of FC873795 vs. ExPASy Swiss-Prot
Match: PFPB_SOLTU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.205e-11
Identity = 40/123 (32.52%), Postives = 62/123 (50.41%), Query Frame = 1
Query:    7 LPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRWSQNPGASSIGRPAINPATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTLCVE 375
            LPS FD  Y Y LG+    +L +G  G +++V NL  P  +   G   +T++M V+R           +P I  A V++ G  ++        + L++ Y NPGP+QF GP A+    TL +E
Sbjct:  431 LPSNFDSTYCYALGYGAGSLLQSGKTGLISSVGNLAAPVEELTVGGTALTALMDVER------RHGKFKPVIKKAMVELEGAPFKKFASKREEWALNNRYINPGPIQFVGPVANKVNHTLLLE 547          
The following BLAST results are available for this feature:
BLAST of FC873795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PFPA_RICCO3.319e-8683.52Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPA_SOLTU1.595e-8076.80Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPB_RICCO4.426e-1434.15Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPB_SOLTU1.205e-1132.52Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI2AE05FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AE05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873795 ID=FC873795; Name=FC873795; organism=Citrus clementina; type=EST; length=673bp
GGATCATTGCCATCTAAATTCGACTGTGACTATGCCTACGTTCTTGGACA
CATCTGCTACCATATTCTTGCTGCTGGTTTGAATGGTTACATGGCTACTG
TGACTAATCTTAAGAATCCTGCGAACAAGTGGCGTTGTGGTGCTGCTCCA
ATTACATCAATGATGACTGTAAAACGTTGGTCTCAAAATCCGGGTGCTTC
TTCAATTGGACGACCGGCTATTAACCCCGCTACTGTGGATATGAGAGGCA
AAGCTTATGAGCTCTTGAGACAAAATGCAACAAGATTCTTGTTGGACGAC
CTCTACAGAAATCCTGGACCCGTTCAGTTTGATGGTCCTGGTGCAGATGC
TAAGGCTGTAACTCTGTGTGTTGAAGACCGGGATTACATGGGCCGTATTA
AGGAACTGCAGAAGTATCTAGACGAGGTTCGAACCATAGTGAAACCAGGT
TGTTCACAAGAGGTACTGAAAGCAGCTTTGAGTGTTATGGCTTCTGTGAC
GGAAGTTCTCTCAGCAATGTCTGCATCTGGAGGCCAGACAACACTTTAAG
ACGAAGTTGGCTGATTATGCTTTGCTTTCTTCTTTAAGACAACTTAGCTG
ATTATGCTTGCTTTCTTCTTCTTTTGCCAAGCCATTTACTGTGTATTGGT
AGTAATGAATTGAGTTCATTCTC
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