FC873857

Overview
NameFC873857
Unique NameFC873857
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873857 vs. ExPASy Swiss-Prot
Match: ERH_ARATH (Enhancer of rudimentary homolog OS=Arabidopsis thaliana GN=At5g10810 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.215e-44
Identity = 81/101 (80.20%), Postives = 95/101 (94.06%), Query Frame = 3
Query:   75 ANRHTIILMQTSPSRATRTFMDYGSISQAMDGICGLYERKLKELNPAIRDITYDVADLYNFIDGLADMSALVYDHSIQAYLPYDRQWIKQRTFQHLKKLAH 377
            ++RHTIIL+Q SPSRATRTFMDY SI QAMDGICGLYERKLKE+NP++R+I+YD+ADLYNFIDGLAD+SALVYDHSI AYLPYDRQWIKQ+ F HLK++A+
Sbjct:    6 SSRHTIILLQNSPSRATRTFMDYDSIGQAMDGICGLYERKLKEINPSLRNISYDIADLYNFIDGLADLSALVYDHSISAYLPYDRQWIKQKAFHHLKRIAN 106          
BLAST of FC873857 vs. ExPASy Swiss-Prot
Match: ERH_DICDI (Enhancer of rudimentary homolog OS=Dictyostelium discoideum GN=erh PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.221e-26
Identity = 51/97 (52.58%), Postives = 76/97 (78.35%), Query Frame = 3
Query:   84 HTIILMQTSPSRATRTFMDYGSISQAMDGICGLYERKLKELNPAIRDITYDVADLYNFIDGLADMSALVYDHSIQAYLPYDRQWIKQRTFQHLKKLA 374
            HTI+L+QT+  +++RTFMDY S++QA++GIC +YE++LK+  P  ++ITYD++ L+ FID LAD+S LVY   I AY PY+++WIK +   HL+KLA
Sbjct:    3 HTIVLLQTTMGKSSRTFMDYESVNQAIEGICNMYEQRLKQERPNQKNITYDISQLFKFIDSLADLSCLVYTSHINAYTPYNKEWIKTKIINHLQKLA 99          
BLAST of FC873857 vs. ExPASy Swiss-Prot
Match: ERH_AEDAE (Enhancer of rudimentary homolog OS=Aedes aegypti PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.494e-21
Identity = 43/97 (44.33%), Postives = 67/97 (69.07%), Query Frame = 3
Query:   84 HTIILMQTSPSRATRTFMDYGSISQAMDGICGLYERKLKELNPAIRDITYDVADLYNFIDGLADMSALVYDHSIQAYLPYDRQWIKQRTFQHLKKLA 374
            HTI+L+Q   +  TRT+ DY S+++ M+G+C +YE  LK  NP    ITYD++ L++F+D LAD+S LVY  S   Y PY+++WIK++ +  L++ A
Sbjct:    3 HTILLVQPGRNPETRTYSDYESVNECMEGVCKIYEEHLKRRNPNTPTITYDISQLFDFVDQLADLSCLVYQKSTNTYAPYNKEWIKEKIYVLLRQAA 99          
BLAST of FC873857 vs. ExPASy Swiss-Prot
Match: ERH_MOUSE (Enhancer of rudimentary homolog OS=Mus musculus GN=Erh PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.230e-20
Identity = 43/97 (44.33%), Postives = 66/97 (68.04%), Query Frame = 3
Query:   84 HTIILMQTSPSRATRTFMDYGSISQAMDGICGLYERKLKELNPAIRDITYDVADLYNFIDGLADMSALVYDHSIQAYLPYDRQWIKQRTFQHLKKLA 374
            HTI+L+Q +     RT+ DY S+++ M+G+C +YE  LK +NP    ITYD++ L++FID LAD+S LVY    Q Y PY++ WIK++ +  L++ A
Sbjct:    3 HTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDFIDDLADLSCLVYRADTQTYQPYNKDWIKEKIYVLLRRQA 99          
BLAST of FC873857 vs. ExPASy Swiss-Prot
Match: ERH_HUMAN (Enhancer of rudimentary homolog OS=Homo sapiens GN=ERH PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.230e-20
Identity = 43/97 (44.33%), Postives = 66/97 (68.04%), Query Frame = 3
Query:   84 HTIILMQTSPSRATRTFMDYGSISQAMDGICGLYERKLKELNPAIRDITYDVADLYNFIDGLADMSALVYDHSIQAYLPYDRQWIKQRTFQHLKKLA 374
            HTI+L+Q +     RT+ DY S+++ M+G+C +YE  LK +NP    ITYD++ L++FID LAD+S LVY    Q Y PY++ WIK++ +  L++ A
Sbjct:    3 HTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDFIDDLADLSCLVYRADTQTYQPYNKDWIKEKIYVLLRRQA 99          
BLAST of FC873857 vs. ExPASy Swiss-Prot
Match: ERH_BOVIN (Enhancer of rudimentary homolog OS=Bos taurus GN=ERH PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.230e-20
Identity = 43/97 (44.33%), Postives = 66/97 (68.04%), Query Frame = 3
Query:   84 HTIILMQTSPSRATRTFMDYGSISQAMDGICGLYERKLKELNPAIRDITYDVADLYNFIDGLADMSALVYDHSIQAYLPYDRQWIKQRTFQHLKKLA 374
            HTI+L+Q +     RT+ DY S+++ M+G+C +YE  LK +NP    ITYD++ L++FID LAD+S LVY    Q Y PY++ WIK++ +  L++ A
Sbjct:    3 HTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDFIDDLADLSCLVYRADTQTYQPYNKDWIKEKIYVLLRRQA 99          
BLAST of FC873857 vs. ExPASy Swiss-Prot
Match: ER_DROME (Protein enhancer of rudimentary OS=Drosophila melanogaster GN=e(r) PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.913e-20
Identity = 43/102 (42.16%), Postives = 66/102 (64.71%), Query Frame = 3
Query:   84 HTIILMQTSPSRATRTFMDYGSISQAMDGICGLYERKLKELNPAIRDITYDVADLYNFIDGLADMSALVYDHSIQAYLPYDRQWIKQRTFQHLKKLAH*INT 389
            HTI+L+Q      TRT+ DY S+++ M+G+C +YE  LK  NP    ITYD++ L++FID + D+S +VY  S   Y PY++ WIK++ +  L++ A   NT
Sbjct:    3 HTILLVQPGARPETRTYCDYESVNECMEGVCKIYEEHLKRRNPNTPTITYDISQLFDFIDTMVDISCMVYQKSTNTYAPYNKDWIKEKIYVLLRQAAFSSNT 104          
BLAST of FC873857 vs. ExPASy Swiss-Prot
Match: ERH_DANRE (Enhancer of rudimentary homolog OS=Danio rerio GN=erh PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.913e-20
Identity = 42/97 (43.30%), Postives = 66/97 (68.04%), Query Frame = 3
Query:   84 HTIILMQTSPSRATRTFMDYGSISQAMDGICGLYERKLKELNPAIRDITYDVADLYNFIDGLADMSALVYDHSIQAYLPYDRQWIKQRTFQHLKKLA 374
            HTI+L+Q +     RT+ DY S+++ M+G+C +YE  LK +NP    ITYD++ L++F+D LAD+S LVY    Q Y PY++ WIK++ +  L++ A
Sbjct:    3 HTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDFVDDLADLSCLVYRADTQTYQPYNKDWIKEKIYVLLRRQA 99          
BLAST of FC873857 vs. ExPASy Swiss-Prot
Match: ER_DROVI (Protein enhancer of rudimentary OS=Drosophila virilis GN=e(r) PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.804e-20
Identity = 43/97 (44.33%), Postives = 64/97 (65.98%), Query Frame = 3
Query:   84 HTIILMQTSPSRATRTFMDYGSISQAMDGICGLYERKLKELNPAIRDITYDVADLYNFIDGLADMSALVYDHSIQAYLPYDRQWIKQRTFQHLKKLA 374
            HTI+L+Q      TRT+ DY S+++ M+G+C +YE  LK  NP    ITYD++ L++FID L D+S LVY  S   Y PY++ WIK++ +  L++ A
Sbjct:    3 HTILLVQPGARPETRTYCDYESVNECMEGVCKIYEEHLKRRNPNTPTITYDISQLFDFIDTLIDISCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAA 99          
BLAST of FC873857 vs. ExPASy Swiss-Prot
Match: ERH_TAESO (Enhancer of rudimentary homolog OS=Taenia solium GN=ERH PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.425e-16
Identity = 37/98 (37.76%), Postives = 63/98 (64.29%), Query Frame = 3
Query:   84 HTIILMQTSPSRA-TRTFMDYGSISQAMDGICGLYERKLKELNPAIRDITYDVADLYNFIDGLADMSALVYDHSIQAYLPYDRQWIKQRTFQHLKKLA 374
            HTI+L+Q    +  +R + DY +++Q ++G+C +YE +LK+ NP    ITYD++ L+ FID LAD+S L +  +   Y+P+ + WIK+  +  L+  A
Sbjct:    3 HTILLVQQQVKKPESRVWADYETLNQCLEGVCKIYEEQLKQQNPTAPTITYDISQLFKFIDQLADLSCLEFHPATGTYVPHTKDWIKENIYALLRNQA 100          
The following BLAST results are available for this feature:
BLAST of FC873857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
ERH_ARATH2.215e-4480.20Enhancer of rudimentary homolog OS=Arabidopsis tha... [more]
ERH_DICDI1.221e-2652.58Enhancer of rudimentary homolog OS=Dictyostelium d... [more]
ERH_AEDAE4.494e-2144.33Enhancer of rudimentary homolog OS=Aedes aegypti P... [more]
ERH_MOUSE2.230e-2044.33Enhancer of rudimentary homolog OS=Mus musculus GN... [more]
ERH_HUMAN2.230e-2044.33Enhancer of rudimentary homolog OS=Homo sapiens GN... [more]
ERH_BOVIN2.230e-2044.33Enhancer of rudimentary homolog OS=Bos taurus GN=E... [more]
ER_DROME2.913e-2042.16Protein enhancer of rudimentary OS=Drosophila mela... [more]
ERH_DANRE2.913e-2043.30Enhancer of rudimentary homolog OS=Danio rerio GN=... [more]
ER_DROVI3.804e-2044.33Protein enhancer of rudimentary OS=Drosophila viri... [more]
ERH_TAESO7.425e-1637.76Enhancer of rudimentary homolog OS=Taenia solium G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AH06FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AH06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873857 ID=FC873857; Name=FC873857; organism=Citrus clementina; type=EST; length=746bp
CAAAAAAAAAAAAAATTAAATAAAAAAAATCGCGCTCGCCCTTGCTCTTG
ACGCTATCATCGCTATCTTCAATGGCTAATAGGCACACCATTATTCTGAT
GCAGACTTCTCCAAGCAGAGCAACAAGAACCTTCATGGATTATGGTTCAA
TAAGCCAAGCTATGGATGGTATATGTGGACTTTATGAAAGGAAGCTTAAG
GAGTTAAATCCAGCAATCAGAGACATCACTTATGATGTTGCAGATCTCTA
CAACTTCATTGATGGTCTTGCAGACATGAGTGCATTAGTATACGATCACT
CAATTCAGGCTTATTTGCCGTATGACAGACAGTGGATCAAACAAAGGACA
TTTCAACATCTTAAGAAGTTGGCGCATTGAATAAATACTTATTATATTCA
GCCACGCCAGTGTTTTGTTGTTTCCTAATTTCTCTCTGGCCCTGAACATG
GTAGTCGGAAGATGTAAACAAATTGTAGAATCAGAGTCTTATTTTGGTTT
TGCCCTTGGGCAGAAGATTGCGGAATGTGGCAATCATATTCTCTTCCTGT
GCTTCCTGTGTCACAGGAAGGGAGATTTATTGAAGAACAGTTTTATCGAT
AGTTATTGGTCCAATGTAAGCTGACGCGTCATAGCCAGAGAGCGCGCAAA
TCTAAAAAGTTTCTGACATTTGATATGGAACTATATATATGATGTGTAAC
TTGATTGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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