FC875342

Overview
NameFC875342
Unique NameFC875342
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length681
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15457 contig Ccv1_Contig15457:89..769. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875342 vs. ExPASy Swiss-Prot
Match: PAPS2_HUMAN (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 OS=Homo sapiens GN=PAPSS2 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.455e-36
Identity = 80/156 (51.28%), Postives = 107/156 (68.59%), Query Frame = 3
Query:  213 ELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVIAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGXDLEVLEPI 680
            EL V ++  D  + EA TLP + +TK+DLQWV VLSEGWA+PL GFMRE E+LQ +HF++L LDDG V+NMS+PIVL +  E K R+   ++  L      V AIL D E Y+H KEER +R WGTT    P++ + +  +G+WL+G DL+VLE I
Sbjct:  226 ELFVPENKLDHVRAEAETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTL-LDDG-VINMSIPIVLPVSAEDKTRLEGCSKFVLAHGGRRV-AILRDAEFYEHRKEERCSRVWGTTCTKHPHI-KMVMESGDWLVGGDLQVLEKI 377          
BLAST of FC875342 vs. ExPASy Swiss-Prot
Match: PAPS1_HUMAN (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 OS=Homo sapiens GN=PAPSS1 PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.347e-34
Identity = 75/159 (47.17%), Postives = 107/159 (67.30%), Query Frame = 3
Query:  204 KLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVIAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGXDLEVLEPI 680
            ++ EL V ++   + K +A TLP +++ K+D+QWV VL+EGWA+PL+GFMRE E+LQ LHF+ L   DG V+N+SVPIVL    E K R+   T  AL+  +   +AIL + E ++H KEER AR WGTT    PY+ + +   G+WLIG DL+VL+ +
Sbjct:  233 EVKELYVPENKLHLAKTDAETLPALKINKVDMQWVQVLAEGWATPLNGFMREREYLQCLHFDCLL--DGGVINLSVPIVLTATHEDKERLDGCTAFALM-YEGRRVAILRNPEFFEHRKEERCARQWGTTCKNHPYI-KMVMEQGDWLIGGDLQVLDRV 387          
BLAST of FC875342 vs. ExPASy Swiss-Prot
Match: PAPS1_CAVPO (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 OS=Cavia porcellus GN=PAPSS1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.347e-34
Identity = 75/159 (47.17%), Postives = 107/159 (67.30%), Query Frame = 3
Query:  204 KLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVIAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGXDLEVLEPI 680
            ++ EL V ++   + K +A +LP +++ K+D+QWV VL+EGWA+PL GFMRE E+LQ LHF+ L   DG V+N+SVPIVL   +E K R+   T  AL+  +   +AIL + E ++H KEER AR WGTT    PY+ + +   G+WLIG DL+VL+ I
Sbjct:  233 EVKELYVPENKLHLAKTDAESLPALQINKVDMQWVQVLAEGWATPLGGFMREREYLQCLHFDCLL--DGGVINLSVPIVLTATEEDKERLDGCTAFALI-YEGRRVAILRNPEFFEHRKEERCARQWGTTCKSHPYI-KMVMEQGDWLIGGDLQVLDRI 387          
BLAST of FC875342 vs. ExPASy Swiss-Prot
Match: PAPS1_MOUSE (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 OS=Mus musculus GN=Papss1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.760e-34
Identity = 76/159 (47.80%), Postives = 106/159 (66.67%), Query Frame = 3
Query:  204 KLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVIAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGXDLEVLEPI 680
            ++ EL V ++   + K +A  LP +++ K+D+QWV VL+EGWA+PL+GFMRE E+LQ LHF+ L   DG V+N+SVPIVL    E K R+   T  ALV  +   +AIL + E ++H KEER AR WGTT    PY+ + +   G+WLIG DL+VL+ I
Sbjct:  233 EVKELYVPENKLHLAKTDAEALPALKINKVDMQWVQVLAEGWATPLNGFMREREYLQCLHFDCLL--DGGVINLSVPIVLTATHEDKERLDGCTAFALV-YEGRRVAILRNPEFFEHRKEERCARQWGTTCKNHPYI-KMVLEQGDWLIGGDLQVLDRI 387          
BLAST of FC875342 vs. ExPASy Swiss-Prot
Match: PAPS2_MOUSE (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 OS=Mus musculus GN=Papss2 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.920e-34
Identity = 86/214 (40.19%), Postives = 128/214 (59.81%), Query Frame = 3
Query:   54 KTPLPSRSLSKSNISHFAPPLTSLSFKQKTTAPHFKLRSIRAGLIEPDGGKLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLD-----DGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVIAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGXDLEVLEPI 680
            +TP      + S++S     +  L  +++   PH  ++ I             EL V ++  D  + EA TLP + +TK+DLQWV +LSEGWA+PL GFMRE E+LQTLHF++L LD     DG V+NMS+PIVL +  + K R+   ++ AL+  +   +A+L D E Y+H KEER +R WGT     P++ + +  +G+WL+G DL+VLE I
Sbjct:  187 ETPECVLKTNLSSVSDCVQQVVEL-LQEQNIVPHTTIKGIH------------ELFVPENKVDQIRAEAETLPSLPITKLDLQWVQILSEGWATPLKGFMREKEYLQTLHFDTL-LDGVVPRDG-VINMSIPIVLPVSADDKARLEGCSKFALM-YEGRRVALLQDPEFYEHRKEERCSRVWGTATAKHPHI-KMVMESGDWLVGGDLQVLERI 383          
BLAST of FC875342 vs. ExPASy Swiss-Prot
Match: PAPSS_URECA (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase OS=Urechis caupo PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.792e-32
Identity = 78/156 (50.00%), Postives = 100/156 (64.10%), Query Frame = 3
Query:  213 ELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVIAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGXDLEVLEPI 680
            EL V +S  +  K E   LP + +TK+D QWV VLSEGWA+PL+GFMRE E+LQ+ HF  L   DG V N S+PIVL +    K R+  S+  AL   +   IAIL   E Y+H KEER +R +GT+  G PYV + I  +G+WL+G DLEVLE I
Sbjct:  221 ELFVPESGLEHAKAEIVDLPTMEITKLDTQWVQVLSEGWATPLTGFMREREYLQSQHFGCLL--DGGVTNQSIPIVLPVHTADKDRLEGSSAFAL-SYEGKRIAILRTPEFYEHRKEERCSRQFGTSNAGQPYV-KMIMESGDWLVGGDLEVLERI 372          
BLAST of FC875342 vs. ExPASy Swiss-Prot
Match: SATC1_SORC5 (Probable bifunctional SAT/APS kinase 1 OS=Sorangium cellulosum (strain So ce56) GN=sat1/cysC1 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13
Identity = 51/167 (30.54%), Postives = 81/167 (48.50%), Query Frame = 3
Query:  174 RAGLIEPDGGKLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVIAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGXDLEVLE 674
            RAGL  P GG+L +  V    R       A LPR+RL +     + ++  G  SPL GFM   ++L+ +     RL+ G V   S+PI LA+  E   R+   + VAL   D  V+ +L  ++ +   KE      +G T  G P V   +  +G+  +G ++ ++E
Sbjct:  187 RAGLAPPHGGELVDRFVRGDARQRLLERVAGLPRVRLDERGASDLELIGNGAYSPLKGFMTSRDYLRVV--RERRLESGLV--WSIPITLAVPGEDAARLSLGSEVALASPDGRVVGVLELVDRWTPDKEVEARNVYGATDEGHPGV-AYLRSSGDVYLGGEVWLIE 348          
BLAST of FC875342 vs. ExPASy Swiss-Prot
Match: MET3_SCHPO (Sulfate adenylyltransferase OS=Schizosaccharomyces pombe GN=sua1 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.110e-12
Identity = 51/154 (33.12%), Postives = 77/154 (50.00%), Query Frame = 3
Query:  225 DKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDD--NVIAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGXDLEVLEPI 680
            D  LR+  ++EA +LP+I L++     V ++  G  SPL GFM + ++L  +   +LRL  G V    +PI L +++ Q   +    RVAL+D  D   VIAIL   + Y   K     + +G      P VD     AGN  +G  L+ + PI
Sbjct:   13 DAPLREQLEQEATSLPKIVLSERQFCDVELILNGGFSPLDGFMNQKDYLNVV--ENLRLSTGEV--FPIPITLDLNESQADSLKAGDRVALLDPRDGQTVIAILTVEDKYTPDKANEAEKVFGANDRAHPAVDYLFGRAGNVYVGGKLQAVTPI 162          
BLAST of FC875342 vs. ExPASy Swiss-Prot
Match: MET3_USTMA (Sulfate adenylyltransferase OS=Ustilago maydis GN=MET3 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.472e-12
Identity = 53/167 (31.74%), Postives = 92/167 (55.09%), Query Frame = 3
Query:  192 PDGGKLTELIV-DKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQ--KRRIGESTRVALVD-SDDNVIAILNDIEIYKHPKEERIARTWGT---TAPGLPYVDQAITYAGNWLIGXDLEVL 671
            P GG L +L+V D  +    ++EA TLP I LT+  L  + ++  G  SPL GFM ++++   L  +++RL DG++  M  PI L +D++Q    +I +  R+AL D  DDN IAI+   ++Y   K       +G+     P + Y+ +++    N+ +G D++ +
Sbjct:    5 PHGGVLKDLLVRDAPIAAQLRQEADTLPEIVLTERQLCDLELIINGGFSPLQGFMNQTDYNGCL--DNMRLADGNLFPM--PITLDVDEQQIEALKIQQGARIALRDPRDDNAIAIITVTDVYAVDKVREATAVFGSDDLAHPAITYLHKSVK---NFYVGGDVQAV 164          
BLAST of FC875342 vs. ExPASy Swiss-Prot
Match: SAT_RUBXD (Sulfate adenylyltransferase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=sat PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.229e-12
Identity = 51/166 (30.72%), Postives = 86/166 (51.81%), Query Frame = 3
Query:  186 IEPDGGKLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVIA--ILNDIEIYKHPKEERIA-RTWGTTAPGLPYVDQAITYAGNWLIGXDLEVLE 674
            I P GG L +  V    R+ R++ AA LPRI L   +L  + ++  G  SPL+GFM   ++   +    +RL DG  +  S+PI L++ +E+ R   E   VAL + +  ++A  ++ D   Y    E ++  RT  T  PG+     A+   G+ L+G ++ +L+
Sbjct:    9 ITPHGGTLVDRRVPVGEREERRQRAAELPRIVLGPRNLSDLEMIGTGVFSPLTGFMGREDYESVV--EEMRLADG--LPWSIPITLSVSEEEARSFEEGDEVALANGEGEIVATMVVEDRYTYDRAHEAKLVYRTTDTDHPGV----AALFRQGDVLVGGEVSLLD 166          
The following BLAST results are available for this feature:
BLAST of FC875342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
PAPS2_HUMAN2.455e-3651.28Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
PAPS1_HUMAN1.347e-3447.17Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
PAPS1_CAVPO1.347e-3447.17Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
PAPS1_MOUSE1.760e-3447.80Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
PAPS2_MOUSE3.920e-3440.19Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
PAPSS_URECA4.792e-3250.00Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
SATC1_SORC52.236e-1330.54Probable bifunctional SAT/APS kinase 1 OS=Sorangiu... [more]
MET3_SCHPO1.110e-1233.12Sulfate adenylyltransferase OS=Schizosaccharomyces... [more]
MET3_USTMA2.472e-1231.74Sulfate adenylyltransferase OS=Ustilago maydis GN=... [more]
SAT_RUBXD3.229e-1230.72Sulfate adenylyltransferase OS=Rubrobacter xylanop... [more]

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Properties
Property NameValue
Genbank descriptionC31402H04EF CTVClemen1 Citrus clementina cDNA clone C31402H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875342 ID=FC875342; Name=FC875342; organism=Citrus clementina; type=EST; length=681bp
GGGGTTCTCTCTCAGTTCAATTAACAATGGCCACCATGTCCACTCTGTTC
GCCAAAACCCCACTTCCCTCCCGATCCCTCTCCAAATCTAATATTTCCCA
TTTTGCTCCTCCCCTCACATCCCTCTCCTTCAAGCAAAAGACCACCGCCC
CCCATTTCAAGCTCCGGAGTATCCGGGCCGGGCTGATCGAACCGGACGGC
GGGAAGCTGACGGAGCTGATCGTCGACAAGTCGTTGAGGGACGTTAGGAA
GCGGGAGGCGGCGACGCTGCCGAGGATCAGGCTGACGAAGATTGACCTTC
AATGGGTACACGTGTTGAGCGAGGGTTGGGCCAGCCCTCTAAGCGGGTTC
ATGAGAGAATCCGAGTTCCTCCAAACTCTTCATTTCAACTCGCTCCGTCT
GGACGACGGGTCGGTTGTTAACATGTCCGTGCCGATCGTCTTGGCGATCG
ACGACGAGCAGAAGCGTCGGATTGGTGAGTCGACGCGTGTCGCTCTCGTT
GACTCCGATGACAACGTCATTGCGATTTTGAACGACATTGAGATCTACAA
GCACCCCAAAGAAGAAAGGATAGCCCGAACATGGGGGACAACTGCCCCTG
GTCTACCTTATGTTGACCAGGCCATAACTTATGCTGGAAATTGGCTGATT
GGANGTGACTTGGAGGTGCTAGAACCAATCA
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