FC875508

Overview
NameFC875508
Unique NameFC875508
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length219
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13842 contig Ccv1_Contig13842:1..213. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC875508 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.532e-11
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 1 
Query:  109 SFILTLVKNCPFPVWPVIQPNASHPVLERGGFYLHRL 219
            +FILTLV NCP+ +WP IQPNA HPVLERGGF LH L
Sbjct:   28 NFILTLVNNCPYTIWPAIQPNAGHPVLERGGFTLHSL 64
The following BLAST results are available for this feature:
BLAST of FC875508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
OLP1_SOLLC2.532e-1175.68Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionC31404F12EF CTVClemen1 Citrus clementina cDNA clone C31404F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875508 ID=FC875508; Name=FC875508; organism=Citrus clementina; type=EST; length=219bp
ATCTGTTTTTGTTGTTTATTAGTTTTTCTTAAAACGAAAATGGCCTCTAC
TTCTCCCATTTTCATTTCATCAACTATCCTTCTTCTCCTCAGCTCCTACG
CCAAAGCAAGCTTCATACTGACCCTAGTCAAGAACTGCCCCTTCCCCGTC
TGGCCGGTCATCCAGCCCAACGCCAGCCACCCAGTCCTCGAACGTGGCGG
CTTCTATCTCCATAGGCTC
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