FC875524
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875524 vs. ExPASy Swiss-Prot
Match: ERD22_CAEEL (Putative ER lumen protein retaining receptor C28H8.4 OS=Caenorhabditis elegans GN=C28H8.4 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.778e-21 Identity = 55/158 (34.81%), Postives = 92/158 (58.23%), Query Frame = 1 Query: 226 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYAIHXXXXXXXXXXXXWV-IYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN-RIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFAL 690 N+F ++A+ H + I +L+ K+ K ++C+G+S +SQ L A+ R F +++ + +Y++ F RS+YM + D F + ++VP A+LALLI+ H+ + W F +YLEAV++LPQL ++Q+T E TAHY+FAL Sbjct: 2 NIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISLYNTTMKITFLAATYATVYLMFFKFRSTYMRESDTFRVELLIVPAAILALLIN----HDFAPFELLWTFSIYLEAVAILPQLFLLQSTGSAEVITAHYLFAL 155
BLAST of FC875524 vs. ExPASy Swiss-Prot
Match: ERD2_CAEEL (ER lumen protein retaining receptor OS=Caenorhabditis elegans GN=erd-2 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18 Identity = 52/157 (33.12%), Postives = 86/157 (54.78%), Query Frame = 1 Query: 226 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYAIHXXXXXXXXXXXXW-VIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFAL 690 NLF A+ H+I I VL+ K+ K ++C G+S +SQ L A+ R F ++ + + +Y++ +++Y + D+F I ++V+P +LALLI+ I + W F +YLEAV+++PQL ++ T E TAHY+FAL Sbjct: 2 NLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFSFYNTAMKIFYLVASFGTVYLMWAKFKATYDRNNDSFRIEFLVIPSMILALLINHEF---IFMEVMWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFAL 155
BLAST of FC875524 vs. ExPASy Swiss-Prot
Match: ERD2_PETHY (ER lumen protein retaining receptor OS=Petunia hybrida GN=ERD2 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.186e-17 Identity = 52/161 (32.30%), Postives = 91/161 (56.52%), Query Frame = 1 Query: 226 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYAIHXXXXXXXXXXXXWVIYMIRFN--LRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFAL 690 N+F +A + H + VL+ K+ K+CAG+SLK+QEL A+ R ++ F+ Y + +++ +R + +R SY +D+D F ++V+PC +LAL+I+ + + W F +YLEAV++LPQL ++Q T+ ++ T Y+F L Sbjct: 2 NIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFVTRYLDIFTDFISLY--NTTMKLVFLGSSLSIVWYMRHHKIVRRSYDKDQDTFRHLFLVLPCLLLALVINEKFT---FKEVMWTFSIYLEAVAILPQLVLLQRTRNIDNLTGQYIFLL 157
BLAST of FC875524 vs. ExPASy Swiss-Prot
Match: ERD2_CAEBR (ER lumen protein retaining receptor OS=Caenorhabditis briggsae GN=erd-2 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.186e-17 Identity = 48/157 (30.57%), Postives = 86/157 (54.78%), Query Frame = 1 Query: 226 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYAIHXXXXXXXXXXXX-WVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFAL 690 N+F + A+ H++ I +L+ K+ K ++C G+S +SQ L A+ R F Y+++ +Y++ +++Y + D F I ++V+P +LAL+I+ + + W F +YLEAV+++PQL ++ T E TAHY+FAL Sbjct: 2 NIFRITADLAHAVAIVILLLKIWKSRSCEGISGRSQILFAVTFFTRYLDLFTSFYSLYNTVMKVLFLAGSIGTVYLMWVKFKATYDRNNDTFRIEFLVIPSIILALIINHEF---MFMEVMWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFAL 155
BLAST of FC875524 vs. ExPASy Swiss-Prot
Match: ERD2_ENTHI (ER lumen protein retaining receptor OS=Entamoeba histolytica GN=ERD2 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17 Identity = 51/157 (32.48%), Postives = 85/157 (54.14%), Query Frame = 1 Query: 226 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYAIHXXXXXXXXXXXX-WVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFAL 690 NLF ++A+ VH + I L+ K++ K C G+SL+SQ L I R F Y+++ + IY+I R++Y + D ++Y++VPC VLA + T + I W F ++LEAV++LPQ+ ++++T VE + Y+F L Sbjct: 4 NLFRISADLVHLLSIYFLLTKIISHKNCIGISLRSQILFFIVWVTRYLDIFYNFYSLYNTILKIVYLTTSAYTIYLISKRFRATYDKIHDTLNVWYLIVPCIVLAFIF---TEDYSITEICWTFSIFLEAVAILPQILLLRSTGEVENLNSQYIFCL 157
BLAST of FC875524 vs. ExPASy Swiss-Prot
Match: ERD2_DICDI (ER lumen protein retaining receptor OS=Dictyostelium discoideum GN=kdelr PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 51/162 (31.48%), Postives = 89/162 (54.94%), Query Frame = 1 Query: 226 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYAIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN---RIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFAL 690 NLF + +H + +L++K+ +K+CAG+SLKSQ L I R L+ ++V Y + +++I + +Y +D D F I Y++ CA+L+L+ + T+ I + I W F +YLE++++LPQL ++Q T VE T++Y+ L Sbjct: 2 NLFSFLGDMLHLGSMLILLFKIKNDKSCAGVSLKSQILFTIVFTARYLDLFTNYVSLYITFMKITYIAVSY--YTLHLIARKYKFTYDKDHDTFKIVYLIASCAILSLITYDKTTIGIYSTFLEILWTFSIYLESIAILPQLILLQRTGEVEALTSNYIVLL 161
BLAST of FC875524 vs. ExPASy Swiss-Prot
Match: ERD2_DROME (ER lumen protein retaining receptor OS=Drosophila melanogaster GN=KdelR PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17 Identity = 51/159 (32.08%), Postives = 90/159 (56.60%), Query Frame = 1 Query: 226 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYAIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFAL 690 N+F A + H I +L+ K+ K ++CAG+S KSQ L A+ R L+ ++V Y + +Y++ +++Y + D+F I +++VPCA+L+L+I+ + + + W F +YLE+V++LPQL ++ T E T+HY+FAL Sbjct: 2 NIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLY--NSVMKVLFLATSGATVYLMYVKFKATYDHNHDSFRIEFLLVPCALLSLVINHEFT---VMEVLWTFSIYLESVAILPQLFLVSRTGEAESITSHYLFAL 155
BLAST of FC875524 vs. ExPASy Swiss-Prot
Match: ERD2_SCHPO (ER lumen protein retaining receptor OS=Schizosaccharomyces pombe GN=erd2 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 54/151 (35.76%), Postives = 84/151 (55.63%), Query Frame = 1 Query: 244 EAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYA--IHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFAL 690 + H I +L++++ K KTC+GLSLKS L + R Y + Y + ++ Y++ LR +Y + D F Y++ CAVLAL I+P TS+ I N I W F ++LE+V++LPQL ++Q + E TAHY+FA+ Sbjct: 9 DMAHLAAIFLLLHRMKKSKTCSGLSLKSHLLFLLVYVTR-YLNLFWRYKSLYYFLMRIVFIASESYICYLMLMTLRPTYDKRLDTFRTEYILGGCAVLAL-IYP-TSYTISN-ILWTFSIWLESVAILPQLFMLQRSGETESLTAHYLFAM 155
BLAST of FC875524 vs. ExPASy Swiss-Prot
Match: ERD2_ARATH (ER lumen protein retaining receptor OS=Arabidopsis thaliana GN=ERD2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 55/161 (34.16%), Postives = 89/161 (55.28%), Query Frame = 1 Query: 226 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYAIHXXXXXXXXXXXXWVIYMIRFN--LRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFAL 690 N+F A + H I + +L+ K+ K+CAG+SLK+QEL A+ R L+ +V Y + +++ +R + +R SY +D D F YVV+ C VL L+++ + + +FWAF +YLEAV++LPQL ++Q + V+ T YV L Sbjct: 2 NIFRFAGDMSHLISVLILLLKIYATKSCAGISLKTQELYALVFLTRYLDLFTDYVSLY--NSIMKIVFIASSLAIVWCMRRHPLVRRSYDKDLDTFRHQYVVLACFVLGLILNEKFT---VQEVFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVVFL 157
BLAST of FC875524 vs. ExPASy Swiss-Prot
Match: ERD21_RAT (ER lumen protein retaining receptor 1 OS=Rattus norvegicus GN=Kdelr1 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.713e-16 Identity = 54/158 (34.18%), Postives = 85/158 (53.80%), Query Frame = 1 Query: 226 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYAIHXXXXXXXXXXXXWV-IYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFAL 690 NLF + H + I +L+ K+ K ++CAG+S KSQ L A+ R F +++ + ++MI +++Y + D F + ++VVP AVLA L+ H T IL W F +YLE+V++LPQL ++ T E T+HY+FAL Sbjct: 2 NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNTCMKVVYIACSFTTVWMIYSKFKATYDGNHDTFRVEFLVVPTAVLAFLVNHDFTPLEIL----WTFSIYLESVAILPQLFMVSKTGEAETITSHYLFAL 155 The following BLAST results are available for this feature:
BLAST of FC875524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875524 ID=FC875524; Name=FC875524; organism=Citrus clementina; type=EST; length=690bpback to top |