FC875537

Overview
NameFC875537
Unique NameFC875537
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15531 contig Ccv1_Contig15531:202..927. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSJ (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0529100 PE=2 SV=2)

HSP 1 Score: 362.459 bits (929), Expect = 1.328e-99
Identity = 169/219 (77.17%), Postives = 196/219 (89.50%), Query Frame = 3
Query:    3 SSMAAENKNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKS 659
            ++ AA    K K V +FD+EEDLAVSLAKYTA+LSAK   E+G+FTVVLSGGSLI ++RKL EPPY+DS++W+KWHVFWVDERVVPKDH+DSNYKLA DGFLS+VPI TG VYAINDALSAEGAA+DYETCLK L K+ ++A S +TGFP+FD+MLLGMGPDGHIASLFPGHPL+ EN+KWVT+IKDSPKPPPERITFTFPVINSSAY+AMVV GAGK+
Sbjct:   62 AAAAAAGSKKKKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKA 280          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSI (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_031067 PE=3 SV=2)

HSP 1 Score: 362.459 bits (929), Expect = 1.328e-99
Identity = 169/219 (77.17%), Postives = 196/219 (89.50%), Query Frame = 3
Query:    3 SSMAAENKNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKS 659
            ++ AA    K K V +FD+EEDLAVSLAKYTA+LSAK   E+G+FTVVLSGGSLI ++RKL EPPY+DS++W+KWHVFWVDERVVPKDH+DSNYKLA DGFLS+VPI TG VYAINDALSAEGAA+DYETCLK L K+ ++A S +TGFP+FD+MLLGMGPDGHIASLFPGHPL+ EN+KWVT+IKDSPKPPPERITFTFPVINSSAY+AMVV GAGK+
Sbjct:   62 AAAAAAGSKKKKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKA 280          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL5_ARATH (Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 2.426e-93
Identity = 163/220 (74.09%), Postives = 189/220 (85.91%), Query Frame = 3
Query:    6 SMAAEN--KNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKS 659
            SMA  N  K + K V+++D EE+L + LAK+TADLS KF KE+G+FTVV+SGGSLI SLRKLVE PYVDSI+WA+WH FWVDERVVPK+HDDSNYKLAYD FLS+VPI  GNVYAIN+ALSAE AA+DYETCLKHL  +NIL  S +TGFPKFDLMLLGMGPDGH+ASLFPGH L  E++KWV  I DSPKPP ERITFTFPVINSSA++A+VVCG+GK+
Sbjct:   69 SMATTNIGKEEKKRVEIYDLEENLVIDLAKFTADLSDKFCKERGAFTVVVSGGSLIKSLRKLVESPYVDSIDWARWHFFWVDERVVPKNHDDSNYKLAYDSFLSKVPIPPGNVYAINEALSAEAAADDYETCLKHLVNTNILRVSESTGFPKFDLMLLGMGPDGHVASLFPGHGLCNESKKWVVSISDSPKPPSERITFTFPVINSSAHVALVVCGSGKA 288          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSJ (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0547100 PE=2 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.432e-85
Identity = 147/208 (70.67%), Postives = 175/208 (84.13%), Query Frame = 3
Query:   36 KNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKS 659
            K + +FD+EE LA SLAKYTA LS +   E+G+FTV LSGGSLI +LRKL E PY++++EW+KWHVFWVDERVVPKDH DSNYKLA DG LS+VPI    +YAIND LSAEGAA++YETCLK L    ++A S  TGFPK DLMLLGMGPDGH+ASLFPGHP++ EN KWV++IKDSPKPPPERITFTFP++NSSA+IA+VV GAGK+
Sbjct:   76 KKLLIFDAEEYLAESLAKYTARLSGEAVAERGAFTVALSGGSLIKALRKLTESPYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKA 283          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSI (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_30141 PE=3 SV=2)

HSP 1 Score: 315.079 bits (806), Expect = 2.432e-85
Identity = 147/208 (70.67%), Postives = 175/208 (84.13%), Query Frame = 3
Query:   36 KNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKS 659
            K + +FD+EE LA SLAKYTA LS +   E+G+FTV LSGGSLI +LRKL E PY++++EW+KWHVFWVDERVVPKDH DSNYKLA DG LS+VPI    +YAIND LSAEGAA++YETCLK L    ++A S  TGFPK DLMLLGMGPDGH+ASLFPGHP++ EN KWV++IKDSPKPPPERITFTFP++NSSA+IA+VV GAGK+
Sbjct:   76 KKLLIFDAEEYLAESLAKYTARLSGEAVAERGAFTVALSGGSLIKALRKLTESPYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKA 283          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL2_ARATH (Probable 6-phosphogluconolactonase 2 OS=Arabidopsis thaliana GN=At3g49360 PE=2 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 6.869e-72
Identity = 131/204 (64.22%), Postives = 155/204 (75.98%), Query Frame = 3
Query:   45 QVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEG----AAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVC 644
            +VF +  ++AV LAKYTADLS+KF KE+G FTVVLSGG LI  L KL+E PY+DSIEW+KWH+FWVDERV   DH DSNYKLAYDGFLS+VP+   N+YAI++ L AEG    AAE YE CLK     NI+ T  ++GFP+FDL LLGMGPDGH+ASLFPGH  + E  KWVT I DSPKPP +RIT T PVIN ++Y  M VC
Sbjct:    7 RVFKTNNEMAVELAKYTADLSSKFCKERGVFTVVLSGGDLIAWLWKLLEAPYIDSIEWSKWHIFWVDERVCAWDHADSNYKLAYDGFLSKVPVPAENIYAIDNGLGAEGNAELAAERYEECLKQKVNQNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHAQINEKVKWVTSITDSPKPPSKRITLTLPVINCASYNVMAVC 210          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL3_ARATH (Probable 6-phosphogluconolactonase 3 OS=Arabidopsis thaliana GN=At5g24420 PE=2 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 8.971e-72
Identity = 130/203 (64.04%), Postives = 158/203 (77.83%), Query Frame = 3
Query:   48 VFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAED----YETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVC 644
            VF ++ +L+ ++A+YTA+LSAKF KEKG FTVVLSGG LID L KLV+PPY+DSIEW KWHVFWVDERV   +  DSNYKLA +GFLS+VPI   N+YAI+  L+A+G AE     YE CLK+L K  I+  S  TG+P+FDL LLGMGPDGH+ASLFP HP + E +KWVT+I DSPKPPP+RITFT PVINS+ Y  M +C
Sbjct:    8 VFPTKNELSEAMAEYTANLSAKFIKEKGLFTVVLSGGDLIDWLCKLVQPPYIDSIEWPKWHVFWVDERVCAWEDPDSNYKLAMEGFLSKVPIPDKNIYAIDKHLAADGNAEHCATLYEECLKNLVKEKIIPISKKTGYPEFDLQLLGMGPDGHMASLFPNHPQINEKQKWVTYITDSPKPPPKRITFTLPVINSTLYNLMAIC 210          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL4_ARATH (Probable 6-phosphogluconolactonase 4 OS=Arabidopsis thaliana GN=At5g24410 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.871e-69
Identity = 128/211 (60.66%), Postives = 161/211 (76.30%), Query Frame = 3
Query:   24 KNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAED----YETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVC 644
            K K+K + VF ++++L+ ++A YTA+LSAKF KE+G FTVVLSGG LI  L +L+EP Y +SIEW+KWH+FWVDERVVP DH+DSNYKLA+DGFLS+VPI   N+Y I+   +A G A+     YE CLK L   NI+ T  ++GFP+FDL LLGMGPDGH+ASLFPGH  +KE    VT+I DSPKPPP+RITFT PVIN ++Y  M VC
Sbjct:    7 KTKSKKI-VFPTKKELSEAMATYTANLSAKFCKERGYFTVVLSGGDLISWLSELLEPKYQESIEWSKWHIFWVDERVVPLDHEDSNYKLAFDGFLSKVPIPIANIYPIDKDCAALGDAKSAALLYEECLKRLVNRNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHYQIKEKANLVTYITDSPKPPPKRITFTLPVINCASYNLMAVC 216          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL1_ARATH (Probable 6-phosphogluconolactonase 1 OS=Arabidopsis thaliana GN=At1g13700 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.449e-61
Identity = 116/227 (51.10%), Postives = 158/227 (69.60%), Query Frame = 3
Query:   42 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSVQFKLHWVISKL*FAASSMAL 722
            ++V ++ E+L++ L  Y A++S    KE G+F +VLSGGSLI  + KL+EPPY   ++WAKW+VFW DERVV K+HDDSNYKLA D  LS+V +   ++ +IND +SAE AA +YE  ++ + +S  +A S  +  P+FDL+LLGMG DGH+ASLFP HP L+  + WVTF+ DS KPPPERITFT PVINS+A +  VV   G+S    +H  I  L    SS++L
Sbjct:   13 IRVHENLEELSIDLVDYIAEISEASIKEHGAFCIVLSGGSLISFMGKLIEPPYDKIVDWAKWYVFWADERVVAKNHDDSNYKLAKDNLLSKVNVFPRHICSINDTVSAEEAATEYEFAIRQMVRSRTVAASDNSDSPRFDLILLGMGSDGHVASLFPNHPALEVKDDWVTFLTDSHKPPPERITFTLPVINSAANV--VVVATGESKANAIHLAIDDLPLPDSSLSL 237          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSJ (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. japonica GN=Os07g0604000 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 6.032e-60
Identity = 104/210 (49.52%), Postives = 148/210 (70.48%), Query Frame = 3
Query:   30 KNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKS 659
            +N  +++F+S ++++  LA+Y + +S    KE+G F + LSGG L+  L KL E PY  +++W+KW++FW DER V K+H +SNY++  +GFLS+VPI  G+VY+IND  + E AA DYE  ++ L K   +  S +   PKFDL+LL MG DGH+ASLFP HP L+  + W+T+I DSP+PPPERITFT PVINS++ IA+V  G  KS
Sbjct:   13 RNNEIRIFESSDEMSTDLAEYISQVSEISVKERGYFAIALSGGPLVSFLGKLCEAPYNKTLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKS 222          
The following BLAST results are available for this feature:
BLAST of FC875537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
6PGL4_ORYSJ1.328e-9977.17Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL4_ORYSI1.328e-9977.17Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL5_ARATH2.426e-9374.09Probable 6-phosphogluconolactonase 5, chloroplasti... [more]
6PGL3_ORYSJ2.432e-8570.67Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL3_ORYSI2.432e-8570.67Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL2_ARATH6.869e-7264.22Probable 6-phosphogluconolactonase 2 OS=Arabidopsi... [more]
6PGL3_ARATH8.971e-7264.04Probable 6-phosphogluconolactonase 3 OS=Arabidopsi... [more]
6PGL4_ARATH1.871e-6960.66Probable 6-phosphogluconolactonase 4 OS=Arabidopsi... [more]
6PGL1_ARATH2.449e-6151.10Probable 6-phosphogluconolactonase 1 OS=Arabidopsi... [more]
6PGL2_ORYSJ6.032e-6049.52Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionC31405A06EF CTVClemen1 Citrus clementina cDNA clone C31405A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875537 ID=FC875537; Name=FC875537; organism=Citrus clementina; type=EST; length=724bp
CATCATCAATGGCTGCCGAGAATAAGAACAAGAACAAGAACGTACAAGTT
TTTGACTCAGAGGAAGATCTGGCTGTGTCTTTGGCCAAATACACCGCCGA
TCTATCTGCCAAGTTCGGTAAAGAGAAGGGCTCCTTCACTGTCGTCTTAT
CCGGTGGTTCTCTCATCGACTCCCTCAGGAAATTAGTGGAACCCCCGTAT
GTAGATTCAATTGAATGGGCGAAATGGCATGTGTTTTGGGTTGATGAAAG
AGTTGTTCCCAAGGATCATGATGATAGCAATTATAAGCTTGCTTATGATG
GTTTCCTTTCTCAGGTACCAATTACCACTGGCAATGTCTATGCCATCAAT
GATGCATTATCTGCTGAAGGTGCAGCTGAAGATTACGAGACTTGTCTCAA
GCATTTGACAAAGAGCAATATATTAGCTACATCTGCTGCTACTGGTTTTC
CAAAGTTTGATCTCATGCTTCTGGGTATGGGTCCAGATGGACATATAGCT
TCTCTGTTTCCAGGGCATCCTCTTCTCAAGGAGAATGAGAAATGGGTTAC
TTTCATTAAAGACTCGCCAAAGCCACCTCCAGAGAGAATCACTTTCACCT
TCCCTGTAATCAACTCATCTGCATATATTGCAATGGTGGTGTGTGGTGCT
GGAAAATCAGTGCAGTTCAAACTGCATTGGGTAATATCAAAACTCTGATT
TGCTGCCAGTTCAATGGCATTGGC
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