FC876300
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 1.124e-93 Identity = 169/184 (91.85%), Postives = 176/184 (95.65%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL AGVHV+VGTPGRVFDMLRRQSLRPDY++MFVLDEADEMLSRGFKDQIYDIFQ+LP KVQVGVFSATMPPEAL+ITRKFMNKP RILVK DELTLEGIKQFY+ V+ EEWKLE Sbjct: 85 QSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILAAGVHVIVGTPGRVFDMLRRQSLRPDYLRMFVLDEADEMLSRGFKDQIYDIFQMLPTKVQVGVFSATMPPEALDITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLE 268
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A2_NICPL (Eukaryotic initiation factor 4A-2 OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 340.887 bits (873), Expect = 2.505e-93 Identity = 169/184 (91.85%), Postives = 176/184 (95.65%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFCSG+LQQLDY LV+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLRPD+IKMFVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMPPEALEITRKFMNKP RILVK DELTLEGIKQFY+ V+ EEWKLE Sbjct: 85 QSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLE 268
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A1_ORYSJ (Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica GN=Os06g0701100 PE=2 SV=2) HSP 1 Score: 340.502 bits (872), Expect = 3.271e-93 Identity = 169/184 (91.85%), Postives = 176/184 (95.65%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFCSGILQQLDY +V+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLP+K+QVGVFSATMPPEALEITRKFMNKP RILVK DELTLEGIKQFY+ VE EEWKL+ Sbjct: 86 QSGTGKTATFCSGILQQLDYAVVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLD 269
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF411_TOBAC (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 339.732 bits (870), Expect = 5.580e-93 Identity = 170/184 (92.39%), Postives = 175/184 (95.11%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFCSGILQQLDY LV+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLRPD IKMFVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMPPEALEITRKFMNKP RILVK DELTLEGIKQFY+ V+ EEWKLE Sbjct: 85 QSGTGKTATFCSGILQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLE 268
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A3_ORYSJ (Eukaryotic initiation factor 4A-3 OS=Oryza sativa subsp. japonica GN=Os02g0146600 PE=2 SV=1) HSP 1 Score: 338.961 bits (868), Expect = 9.518e-93 Identity = 168/184 (91.30%), Postives = 176/184 (95.65%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFCSGILQQLDYGLV+CQ+LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +GVHVVVGTPGRVFDMLRRQSLRPD+IKMFVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMPPEALEITRKFMNKP RILVK DELTLEGIKQFY+ VE E+WKL+ Sbjct: 86 QSGTGKTATFCSGILQQLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEDWKLD 269
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A7_TOBAC (Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 1.243e-92 Identity = 167/184 (90.76%), Postives = 176/184 (95.65%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFCSG+LQQLDY LV+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLRPD+IKMFVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMPPEALEITRKFMNKP RILVK D++TLEGIKQFY+ V+ EEWKLE Sbjct: 85 QSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDDVTLEGIKQFYVNVDKEEWKLE 268
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF410_TOBAC (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 1.243e-92 Identity = 167/184 (90.76%), Postives = 176/184 (95.65%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFCSG+LQQLDY LV+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLRPD+IKMFVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMPPEALEITRKFMNKP RILVK D++TLEGIKQFY+ V+ EEWKLE Sbjct: 85 QSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDDVTLEGIKQFYVNVDKEEWKLE 268
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A_MAIZE (Eukaryotic initiation factor 4A OS=Zea mays PE=2 SV=1) HSP 1 Score: 337.806 bits (865), Expect = 2.120e-92 Identity = 167/184 (90.76%), Postives = 176/184 (95.65%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFCSGILQQLDYGLV+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +GVHVVVGTPGRVFDMLRRQSLRPD IKMFVLDEADEMLSRGFKDQIYDIFQLLP+K+QVGVFSATMPPEALEITRKFMNKP RILVK DELTLEGIKQFY+ ++ E+WKL+ Sbjct: 82 QSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNIDKEDWKLD 265
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A_WHEAT (Eukaryotic initiation factor 4A OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 2.769e-92 Identity = 168/184 (91.30%), Postives = 175/184 (95.11%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFCSGILQQLDYGLV+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +GVHVVVGTPGRVFD++RRQSLRPD IKMFVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMPPEALEITRKFMNKP RILVK DELTLEGIKQFY+ VE EEWKL+ Sbjct: 86 QSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDIVRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLD 269
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF413_TOBAC (Eukaryotic initiation factor 4A-13 (Fragment) OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 337.035 bits (863), Expect = 3.617e-92 Identity = 166/184 (90.22%), Postives = 176/184 (95.65%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFCSG+LQQLDY LV+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLRPD+IKMFVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMPPEALEITRKFMN+P RILVK D++TLEGIKQFY+ V+ EEWKLE Sbjct: 85 QSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNQPVRILVKRDDVTLEGIKQFYVNVDKEEWKLE 268 The following BLAST results are available for this feature:
BLAST of FC876300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876300 ID=FC876300; Name=FC876300; organism=Citrus clementina; type=EST; length=558bpback to top |