FC876413
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1G_PRUAV (Elongation factor 1-gamma OS=Prunus avium PE=2 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 1.908e-72 Identity = 133/175 (76.00%), Postives = 146/175 (83.43%), Query Frame = 1 Query: 112 MAMVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRIL 636 MA+VLHAG TNKNAFK LI AEYTGV VEL +FEMGVTNKTPE+LK+NPIGKVP+LETPDGPIFESNAIARYVARLKADNPL+GSSLID AHIEQWIDF SLEID NI+ WF PR G+AVYLP AEE NTHLASNTYLVGH VTLADII+TCNL GF++++ Sbjct: 1 MALVLHAGKTNKNAFKTLIVAEYTGVKVELAPDFEMGVTNKTPEYLKLNPIGKVPLLETPDGPIFESNAIARYVARLKADNPLIGSSLIDYAHIEQWIDFGSLEIDANIISWFRPRFGYAVYLPPAEEAAISALKRALGALNTHLASNTYLVGHFVTLADIIVTCNLFFGFTKLM 175
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1G2_ORYSJ (Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2) HSP 1 Score: 261.151 bits (666), Expect = 3.369e-69 Identity = 127/176 (72.16%), Postives = 145/176 (82.39%), Query Frame = 1 Query: 112 MAMVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILT 639 MA+VLHAG+ NKNAFKALI AEY+GV VELVKNF+MGV+NKTPEFLKMNPIGK+PVLETPDGP+FESNAIARYV R KADNPL GSSLI+ AHIEQW DFS+ E+D NI +W PR+G A Y+ +EE NTHLASNTYLVGHSVTLADI+MTCNL +GF+RI+T Sbjct: 1 MALVLHAGSGNKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETPDGPVFESNAIARYVTRSKADNPLYGSSLIEYAHIEQWNDFSATEVDANIGKWLYPRLGIAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMT 176
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1G1_ORYSJ (Elongation factor 1-gamma 1 OS=Oryza sativa subsp. japonica GN=Os02g0220600 PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.415e-67 Identity = 123/176 (69.89%), Postives = 143/176 (81.25%), Query Frame = 1 Query: 112 MAMVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILT 639 MA+VLH + NKNAFKALI AEY+GV VEL KNF+MGV+NKTPE+LKMNPIGKVP+LETPDGP+FESNAIARYV R K+DNPL GSSLI+ AHIEQWIDFS+ E+D N +W PR+GFA Y+ +EE NTHLASNTYLVGHSVTLADI+MTCNL +GF+RI+T Sbjct: 1 MALVLHTFDGNKNAFKALIAAEYSGVKVELAKNFQMGVSNKTPEYLKMNPIGKVPILETPDGPVFESNAIARYVTRSKSDNPLYGSSLIEYAHIEQWIDFSATEVDANTGKWLFPRLGFAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMT 176
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1G3_ORYSJ (Elongation factor 1-gamma 3 OS=Oryza sativa subsp. japonica GN=Os06g0571400 PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.198e-66 Identity = 124/175 (70.86%), Postives = 140/175 (80.00%), Query Frame = 1 Query: 112 MAMVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRIL 636 MA+VLH G+ NKNAFKALI AEYTGV VEL KNFEMGV+NKTPEFLKMNP+GK+PVLETP+G +FESNAIARYVARLK ++ L GSSLID +HIEQW+DFS+ E+D NI RW PR+GF Y+P EE NTHLASNTYLVGHSVTLADI+MTCNL GF RIL Sbjct: 1 MALVLHCGSGNKNAFKALIAAEYTGVKVELTKNFEMGVSNKTPEFLKMNPLGKIPVLETPEGAVFESNAIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSATEVDANIGRWLYPRLGFGPYVPVLEEFAITSLKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYYGFVRIL 175
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1G2_ARATH (Probable elongation factor 1-gamma 2 OS=Arabidopsis thaliana GN=At1g57720 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 3.376e-61 Identity = 116/176 (65.91%), Postives = 135/176 (76.70%), Query Frame = 1 Query: 112 MAMVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILT 639 MA+V+H NK A KALI AEY GV +E +F+MGVTNK+PEFLKMNPIGKVPVLETP+GPIFESNAIARYV+R DN L GSSLI+ AHIEQWIDFSSLEID N+L+WF PR+G+A + AEE NTHLASNT+LVGHSVTLADI+ CNL LGF+ ++T Sbjct: 1 MALVMHTYKGNKGANKALIAAEYAGVKIEESADFQMGVTNKSPEFLKMNPIGKVPVLETPEGPIFESNAIARYVSRKNGDNSLNGSSLIEYAHIEQWIDFSSLEIDANMLKWFAPRMGYAPFSAPAEEAAISALKRGLEALNTHLASNTFLVGHSVTLADIVTICNLNLGFATVMT 176
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1G1_ARATH (Probable elongation factor 1-gamma 1 OS=Arabidopsis thaliana GN=At1g09640 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.420e-59 Identity = 115/176 (65.34%), Postives = 132/176 (75.00%), Query Frame = 1 Query: 112 MAMVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILT 639 MA+VLH NK+A KALI AEY GV +++ +F+MGVTNKTP FLKMNPIGKVPVLETP+G +FESNAIARYV+RL DN L GSSLI+ A IEQWIDFSSLEI +ILRWF PR+GF Y AEE NTHL SNTYLVGHS+TLADII CNL LGF+ ++T Sbjct: 1 MALVLHTYKGNKSAEKALIAAEYVGVQIDVPSDFQMGVTNKTPAFLKMNPIGKVPVLETPEGSVFESNAIARYVSRLNGDNSLNGSSLIEYAQIEQWIDFSSLEIYASILRWFGPRMGFMPYSAPAEEGAISTLKRALDALNTHLTSNTYLVGHSITLADIITVCNLNLGFATVMT 176
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1G_ARTSA (Elongation factor 1-gamma OS=Artemia salina PE=1 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 1.583e-26 Identity = 70/166 (42.17%), Postives = 92/166 (55.42%), Query Frame = 1 Query: 142 NKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGP-IFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRIL 636 N AFKALI A+Y+G +E+ K+F G TNK+ FLK P+GKVP E+ DG I ESNAIA YV A+ L GSS ++ A I QW+ F+ EI W P +G + QA + HL + TYLVG +TLADI++TC L + +L Sbjct: 12 NFRAFKALIAAQYSGAKLEIAKSFVFGETNKSDAFLKSFPLGKVPAFESADGHCIAESNAIAYYV----ANETLRGSSDLEKAQIIQWMTFADTEILPASCTWVFPVLGIMQFNKQATARAKEDIDKALQALDDHLLTRTYLVGERITLADIVVTCTLLHLYQHVL 173
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1GA_XENLA (Elongation factor 1-gamma-A OS=Xenopus laevis GN=eef1g-A PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.026e-25 Identity = 66/169 (39.05%), Postives = 95/169 (56.21%), Query Frame = 1 Query: 142 NKNAFKALITAEYTGVNVELVKN---FEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRIL 636 N A+K LI A+Y+G +++ + F+ GVTNKTPEFLK P+GKVP E DG +FES+AIA YV ++ L G++ + A + QW+ FS I W P +G Y QA E ++HL + T+LVG +TLADI +TC+L + ++L Sbjct: 12 NWRAYKPLIAAQYSGFPIKVASSAPEFQFGVTNKTPEFLKKFPLGKVPAFEGKDGFCLFESSAIAHYVG----NDELRGTTRLHQAQVIQWVSFSDSHIVPPASAWVFPTLGIMQYNKQATEQAKEGIKTVLGVLDSHLQTRTFLVGERITLADITVTCSLLWLYKQVL 176
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1G_MOUSE (Elongation factor 1-gamma OS=Mus musculus GN=Eef1g PE=1 SV=3) HSP 1 Score: 112.849 bits (281), Expect = 1.482e-24 Identity = 69/178 (38.76%), Postives = 95/178 (53.37%), Query Frame = 1 Query: 115 AMVLHAGNTNKNAFKALITAEYTGVNVELVK---NFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRIL 636 A L+ N AFKALI A+Y+G V ++ +F G TN+TPEFL+ P GKVP E DG +FESNAIA YV+ + L GS+ +A + QW+ F+ +I W P +G + QA E +THL + T+LVG VTLADI + C L + ++L Sbjct: 3 AGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVKRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVL 176
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1G_RAT (Elongation factor 1-gamma OS=Rattus norvegicus GN=Eef1g PE=2 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 1.935e-24 Identity = 68/178 (38.20%), Postives = 95/178 (53.37%), Query Frame = 1 Query: 115 AMVLHAGNTNKNAFKALITAEYTGVNVELVK---NFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRIL 636 A L+ N AFKALI A+Y+G + ++ +F G TN+TPEFL+ P GKVP E DG +FESNAIA YV+ + L GS+ +A + QW+ F+ +I W P +G + QA E +THL + T+LVG VTLADI + C L + ++L Sbjct: 3 AGTLYTYPENWRAFKALIAAQYSGAQIRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVKRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVL 176 The following BLAST results are available for this feature:
BLAST of FC876413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876413 ID=FC876413; Name=FC876413; organism=Citrus clementina; type=EST; length=639bpback to top |