FC876579
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876579 vs. ExPASy Swiss-Prot
Match: WAP53_MESAU (Telomerase Cajal body protein 1 OS=Mesocricetus auratus GN=Wrap53 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.102e-40 Identity = 46/95 (48.42%), Postives = 68/95 (71.58%), Query Frame = 3 Query: 315 LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN 599 LR ++RAY+ +DE+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T K+GQ+GI+S IAFSP+ + A GSY +T +Y D+ Sbjct: 252 LRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTSRPGRDCEVRATF-AKKQGQSGIISCIAFSPSQP-LYACGSYGRTLGLYAWDD 344 HSP 2 Score: 92.8189 bits (229), Expect = 4.102e-40 Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 2 Query: 23 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVV---TEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 313 NFLKG KW+PDGS LT+S D TLRI++LP S A +Q Y + V EG+++YD+CW+ MS+S P + AS++R++PIH+WDA T Sbjct: 158 NFLKGCKWAPDGSCILTNSADNTLRIYNLPPELYS--------ATEQVDYAEMVPVLRMVEGDTIYDYCWYSLMSSSQPDTSYVASSSRENPIHIWDAFT 249
BLAST of FC876579 vs. ExPASy Swiss-Prot
Match: WAP53_MOUSE (Telomerase Cajal body protein 1 OS=Mus musculus GN=Wrap53 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 5.781e-39 Identity = 46/95 (48.42%), Postives = 68/95 (71.58%), Query Frame = 3 Query: 315 LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN 599 LR ++RAY+ +DE+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T K+GQ+GI+S IAFSP+ + A GSY +T +Y D+ Sbjct: 248 LRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTSRPGRDCEVRATF-AKKQGQSGIISCIAFSPSQP-LYACGSYGRTIGLYAWDD 340 HSP 2 Score: 88.9669 bits (219), Expect = 5.781e-39 Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 2 Query: 23 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 313 NFLKG KW+PDGS LT+S D LRI++LP S D L + EG+++YD+CW+ MS++ P + AS++R++PIH+WDA T Sbjct: 154 NFLKGCKWAPDGSCILTNSADNVLRIYNLPPELYSEQEQV-----DYAEMVPVLRMVEGDTIYDYCWYSLMSSTQPDTSYVASSSRENPIHIWDAFT 245
BLAST of FC876579 vs. ExPASy Swiss-Prot
Match: WAP53_RAT (Telomerase Cajal body protein 1 OS=Rattus norvegicus GN=Wrap53 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.813e-39 Identity = 45/95 (47.37%), Postives = 67/95 (70.53%), Query Frame = 3 Query: 315 LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN 599 LR ++RAY+ +DE+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T K+GQ+GI+S +AFSP + A GSY +T +Y D+ Sbjct: 248 LRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTSRPGRDCEVRTTF-AKKQGQSGIISCLAFSPAQP-LYACGSYGRTLGLYAWDD 340 HSP 2 Score: 89.3521 bits (220), Expect = 9.813e-39 Identity = 42/97 (43.30%), Postives = 63/97 (64.95%), Query Frame = 2 Query: 23 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 313 NFLKG KW+PDGS LT+S D LRI++LP ++ + S D L + EG+++YD+CW+ MS++ P + AS++R++PIH+WDA T Sbjct: 154 NFLKGCKWAPDGSCILTNSADNVLRIYNLPP-----ELYSESEQVDYAEMVPVLRMVEGDTIYDYCWYSLMSSTQPDTSYVASSSRENPIHIWDAFT 245
BLAST of FC876579 vs. ExPASy Swiss-Prot
Match: WAP53_HUMAN (Telomerase Cajal body protein 1 OS=Homo sapiens GN=WRAP53 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.826e-38 Identity = 45/95 (47.37%), Postives = 67/95 (70.53%), Query Frame = 3 Query: 315 LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN 599 LR ++RAY+ +DE+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T K+GQ+GI+S IAFSP + A GSY ++ +Y D+ Sbjct: 264 LRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTARPGRDCEVRATF-AKKQGQSGIISCIAFSPAQP-LYACGSYGRSLGLYAWDD 356 HSP 2 Score: 88.9669 bits (219), Expect = 2.826e-38 Identity = 42/99 (42.42%), Postives = 64/99 (64.65%), Query Frame = 2 Query: 17 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 313 P NFLKG KW+PDGS LT+S D LRI++LP + ++ A+ L + EG+++YD+CW+ MS++ P + AS++R++PIH+WDA T Sbjct: 168 PENFLKGCKWAPDGSCILTNSADNILRIYNLPPE-LYHEGEQVEYAE----MVPVLRMVEGDTIYDYCWYSLMSSAQPDTSYVASSSRENPIHIWDAFT 261
BLAST of FC876579 vs. ExPASy Swiss-Prot
Match: WAP53_BOVIN (Telomerase Cajal body protein 1 OS=Bos taurus GN=WRAP53 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 6.249e-38 Identity = 43/91 (47.25%), Postives = 66/91 (72.53%), Query Frame = 3 Query: 315 LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY 587 LR ++R+Y+ +DE+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T ++GQ+GI+S IAFSPT + A GSY ++ +Y Sbjct: 255 LRASFRSYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTSRPGRDCEVRTTF-AKRQGQSGIISCIAFSPTQP-LYACGSYGRSLGLY 343 HSP 2 Score: 88.9669 bits (219), Expect = 6.249e-38 Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = 2 Query: 17 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS-----LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 313 P NFLKG KW+PDGS LT+S D LRI++LP L + + E + L + EG+++YD+CW+ MS++ P + AS++R++PIH+WDA T Sbjct: 159 PENFLKGCKWAPDGSCILTNSADNILRIYNLPPE----------LYNEGEQLEYAEMAPVLRMVEGDTIYDYCWYSLMSSAQPDTSYVASSSRENPIHIWDAFT 252
BLAST of FC876579 vs. ExPASy Swiss-Prot
Match: GNR1_SCHPO (Guanine nucleotide-binding protein negative regulator 1 OS=Schizosaccharomyces pombe GN=gnr1 PE=1 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.178e-12 Identity = 34/99 (34.34%), Postives = 54/99 (54.55%), Query Frame = 2 Query: 17 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 313 P NF +WSPDGS+ L+ +ED+ L +++P + +S + SY+ E+VY + W+ M DP+S +FA ++RD PI L + TT Sbjct: 45 PLNFFHSSRWSPDGSTILSLTEDQCLNCWNVPFSDLSKKADGPLNFSKHLSYKYQ----SPETVYSYSWYSRMKLDDPSSNLFAVSSRDQPIKLINFTT 139 HSP 2 Score: 29.6462 bits (65), Expect = 1.178e-12 Identity = 20/97 (20.62%), Postives = 38/97 (39.18%), Query Frame = 3 Query: 318 RCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKE-----GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 593 + +Y D + + + F G + AG + F++ ++ + G K GI S + +P + LA+G+YS IY + Sbjct: 143 KASYHMIDHQERYQGSHCLQFTNDGEYLIAGDKNCLHHFNIRTGCKEPVMTTVTHGYKVPLWEFSLKGIQSCFSLNPMDSKTLAVGTYSNRVGIYND 239 The following BLAST results are available for this feature:
BLAST of FC876579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876579 ID=FC876579; Name=FC876579; organism=Citrus clementina; type=EST; length=617bpback to top |