FC876617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876617 vs. ExPASy Swiss-Prot
Match: COL15_ARATH (Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana GN=COL15 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.959e-37 Identity = 103/201 (51.24%), Postives = 122/201 (60.70%), Query Frame = -1 Query: 119 SCGQGAQIWDFNLGRLRGNEEFKQVEVAY---GASDSVFMIKNFNELMKETSLTNT----EIFGEMYPMNCPVTHGDMASFXXXXXNPTANQGPATSESNNLPIARPSSGSAFGKPKGSSSSKNIQFEQPFL---VRTT--AAAKANLELLAQNRGNAMQRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKASDAP 685 S GQ +QIWDFNLG+ RG E+ +VE AY GA+ S F I NF + M ET TN EI + Y + T G + P SESNN PI FG KGS+SS ++ F + +TT A KA+LE LAQNRG+AMQRYKEK+KTRRYDK IRYESRKARADTR RV+GRFVKAS+AP Sbjct: 256 SGGQSSQIWDFNLGQSRGPEDTSRVEAAYVGKGAASS-FTINNFVDHMNETCSTNVKGVKEIKKDDYKRS---TSGQVQ--------------PTKSESNNRPIT-------FGSEKGSNSSSDLHFTEHIAGTSCKTTRLVATKADLERLAQNRGDAMQRYKEKRKTRRYDKTIRYESRKARADTRLRVRGRFVKASEAP 431
BLAST of FC876617 vs. ExPASy Swiss-Prot
Match: COL14_ARATH (Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana GN=COL14 PE=2 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 1.294e-35 Identity = 101/230 (43.91%), Postives = 122/230 (53.04%), Query Frame = -1 Query: 125 GEWVEQQAP---FTSLLMMQRQFGSKECDRVGDEGMFWDG--HSCGQGAQIWDFNLGRLRGNEEFKQVEVAYGASDSVFMIKNFNELMKETSLTNTEIFGEMYPMNCPVTHGDMASFXXXXXNPTANQGPATSESNNLPIARPSSGSAFGKPKGSSSSKNIQFEQPFLVRTTAAAKANLELLAQNRGNAMQRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKASD 799 G + Q +P FTSLLM Q G+ GM W+ HS GQ QIWDFNLG+ R +E VE S F N L +T TN F E Y V + T+ +G TS+SNN+P A S S+ G +++I R A A+LE +AQNR NAMQRYKEKKKTRRYDK IRYE+RKARA+TR RVKGRFVKA+D Sbjct: 199 GGSISQPSPTTSFTSLLMSQSLCGN---------GMQWNATNHSTGQNTQIWDFNLGQSRNPDEPSPVET----KGSTFTFNNVTHLKNDTRTTNMNAFKESYQQEDSV-------------HSTSTKGQETSKSNNIPAAIHSHKSS-NDSCGLHCTEHIAITSNRATRLVAVTNADLEQMAQNRDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKGRFVKATD 401
BLAST of FC876617 vs. ExPASy Swiss-Prot
Match: COL9_ARATH (Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana GN=COL9 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.392e-13 Identity = 47/102 (46.08%), Postives = 61/102 (59.80%), Query Frame = -1 Query: 122 PATSESNNLPIARPSSGSAFGKPKGSSSSKNIQFEQPFLVRTTAAAKANLELLAQNRGNAMQRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKASDA 427 PA S + + SS F + G+SSS + E P+ T A + +N NA+ RYKEKKK R++DK +RY SRKARAD R+RVKGRFVKA +A Sbjct: 262 PAHSNISFSGVTGESSAGDF-QECGASSSIQLSGEPPWYPPTLQDNNACSHSVTRN--NAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEA 360
BLAST of FC876617 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.178e-12 Identity = 33/59 (55.93%), Postives = 45/59 (76.27%), Query Frame = -1 Query: 125 TAAAKANLELLAQNRGNAMQRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKASD 301 T+ E+ + R +A+ RYKEKKK+RRY+KHIRYESRK RA++R R++GRF KA+D Sbjct: 273 TSTRSMTHEINSLERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAKAAD 331
BLAST of FC876617 vs. ExPASy Swiss-Prot
Match: COL10_ARATH (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana GN=COL10 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.010e-12 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = -1 Query: 122 GSSSSKNIQFE-QPFLVRTTAAAKANLELLAQNRGNAMQRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKASDA 355 G+SS K + E QP+ T A+ A R NA+ RYKEKKK R++DK +RY SRK RAD R+RVKGRFVK+ +A Sbjct: 285 GASSMKQLSREPQPWCHPTAQDIIASSH--ATTRNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVKSGEA 361
BLAST of FC876617 vs. ExPASy Swiss-Prot
Match: COL12_ARATH (Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana GN=COL12 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11 Identity = 38/67 (56.72%), Postives = 44/67 (65.67%), Query Frame = -1 Query: 122 PFLVRTTAAAKANLELLA-QNRGNAMQRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKASDA 319 P + + A + N E+ Q R A RYKEKK R + K IRY SRKARADTRKRVKGRFVKA D+ Sbjct: 286 PGFIMSEAPWETNFEVSCPQARNEAKLRYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVKAGDS 352 The following BLAST results are available for this feature:
BLAST of FC876617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876617 ID=FC876617; Name=FC876617; organism=Citrus clementina; type=EST; length=820bpback to top |