FC876672

Overview
NameFC876672
Unique NameFC876672
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876672 vs. ExPASy Swiss-Prot
Match: BEL1_ARATH (Homeobox protein BEL1 homolog OS=Arabidopsis thaliana GN=BEL1 PE=1 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 1.321e-61
Identity = 96/154 (62.34%), Postives = 120/154 (77.92%), Query Frame = 3
Query:  132 SRGETPRLKIIDQALRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEQMYLEETKEQDNNMASSDGATDLDDNSGRPNQTQNPPADQKPTQDQLVRIDSECLSSII 593
            +RGETPRL+++DQALRQQ++++QM+++++HPWRPQRGLPER+V+ LRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPM+E+MY EET+ +   +                  T     D KP  DQL+R++ E LSSI+
Sbjct:  361 ARGETPRLRLLDQALRQQKSYRQMTLVDAHPWRPQRGLPERAVTTLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMIEEMYCEETRSEQMEI------------------TNPMMIDTKPDPDQLIRVEPESLSSIV 496          

HSP 2 Score: 52.7582 bits (125), Expect = 1.321e-61
Identity = 23/30 (76.67%), Postives = 29/30 (96.67%), Query Frame = 2
Query:   11 SALASKAMSRHFRCLRDGIVGQIQATKKAM 100
            +ALAS+AMSRHFRCL+DG+VGQIQAT +A+
Sbjct:  318 TALASRAMSRHFRCLKDGLVGQIQATSQAL 347          
BLAST of FC876672 vs. ExPASy Swiss-Prot
Match: BLH4_ARATH (BEL1-like homeodomain protein 4 OS=Arabidopsis thaliana GN=BLH4 PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 1.385e-51
Identity = 87/138 (63.04%), Postives = 107/138 (77.54%), Query Frame = 3
Query:  126 GTSRGETPRLKIIDQALRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEQMYLEETK------EQDNNMASSDGATDLDDNSGRPNQTQN 521
            G ++GETPRL++++Q+LRQQRAF  M MME   WRPQRGLPERSV++LRAWLFEHFL+PYPSD DKH+LARQTGLSR+QVSNWFINARVRLWKPMVE+MY +E K      E++ N          ++N  +PN  +N
Sbjct:  392 GLTKGETPRLRLLEQSLRQQRAFHHMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLNPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQEAKEREEAEEENENQQQQRRQQQTNNNDTKPNNNEN 529          

HSP 2 Score: 35.4242 bits (80), Expect = 1.385e-51
Identity = 14/24 (58.33%), Postives = 19/24 (79.17%), Query Frame = 2
Query:   11 SALASKAMSRHFRCLRDGIVGQIQ 82
            + LA KAMSRHFRCL+D +  Q++
Sbjct:  351 TTLAQKAMSRHFRCLKDAVAVQLK 374          
BLAST of FC876672 vs. ExPASy Swiss-Prot
Match: BLH2_ARATH (BEL1-like homeodomain protein 2 OS=Arabidopsis thaliana GN=BLH2 PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 6.790e-51
Identity = 87/138 (63.04%), Postives = 107/138 (77.54%), Query Frame = 3
Query:  126 GTSRGETPRLKIIDQALRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEQMYLEETKEQ------DNNMASSDGATDLDDNSGRPNQTQN 521
            G ++GETPRL++++Q+LRQ RAF QM M E   WRPQRGLPERSV++LRAWLFEHFLHPYPSD DKH+LARQTGLSR+QVSNWFINARVRLWKPMVE+MY +E+KE+      + N    +     DD S + N  ++
Sbjct:  466 GLTKGETPRLRLLEQSLRQNRAFHQMGM-EQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQESKEREREEELEENEEDQETKNSNDDKSTKSNNNES 602          

HSP 2 Score: 38.1206 bits (87), Expect = 6.790e-51
Identity = 15/24 (62.50%), Postives = 20/24 (83.33%), Query Frame = 2
Query:   11 SALASKAMSRHFRCLRDGIVGQIQ 82
            +ALA KAMSRHFRCL+D +  Q++
Sbjct:  425 TALAQKAMSRHFRCLKDAVAAQLK 448          
BLAST of FC876672 vs. ExPASy Swiss-Prot
Match: BLH1_ARATH (BEL1-like homeodomain protein 1 OS=Arabidopsis thaliana GN=BLH1 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.153e-50
Identity = 97/153 (63.40%), Postives = 114/153 (74.51%), Query Frame = 3
Query:  105 EKDPVAPGTSRGETPRLKIIDQALRQQRAFQQMSMMESHP----WRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEQMYLEETKEQDNNMASSDGATDLDDNS------GRPNQTQNPPAD 533
            E+D V+ G  R E  RLK +D  LRQQRA QQ+ M++ HP    WRPQRGLPER+VSVLRAWLFEHFLHPYP D DKH+LA+QTGL+RSQVSNWFINARVRLWKPMVE+MY+EE KEQ  NM S +  T LD ++         NQ ++P AD
Sbjct:  344 EEDSVS-GVGRFEGSRLKFVDHHLRQQRALQQLGMIQ-HPSNNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKEQAKNMGSME-KTPLDQSNEDSASKSTSNQEKSPMAD 493          

HSP 2 Score: 38.1206 bits (87), Expect = 1.153e-50
Identity = 17/35 (48.57%), Postives = 25/35 (71.43%), Query Frame = 2
Query:   11 SALASKAMSRHFRCLRDGIVGQIQATKKAMVRERS 115
            ++LA K +SR FRCL++ I GQI+A  K++  E S
Sbjct:  313 TSLALKTISRQFRCLKEAIAGQIKAANKSLGEEDS 347          
BLAST of FC876672 vs. ExPASy Swiss-Prot
Match: BLH7_ARATH (BEL1-like homeodomain protein 7 OS=Arabidopsis thaliana GN=BLH7 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.206e-44
Identity = 76/111 (68.47%), Postives = 89/111 (80.18%), Query Frame = 3
Query:  150 RLKIIDQALRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEQMYLEE----TKEQDNNMASSD 470
            RL+ +DQ +RQQRA Q++ +M+ H WRPQRGLP+ SV VLRAWLFEHFLHPYP D DK +LARQTGLSR QVSNWFINARVRLWKPMVE+MY EE     +E D N +S +
Sbjct:  261 RLRNVDQQVRQQRALQRLGVMQPHTWRPQRGLPDSSVLVLRAWLFEHFLHPYPKDSDKIMLARQTGLSRGQVSNWFINARVRLWKPMVEEMYKEEFTDALQENDPNQSSEN 371          

HSP 2 Score: 40.0466 bits (92), Expect = 3.206e-44
Identity = 19/39 (48.72%), Postives = 26/39 (66.67%), Query Frame = 2
Query:   11 SALASKAMSRHFRCLRDGIVGQIQATKKAMVRERSRCTG 127
            +ALA + +SRHFRCLRD I GQI   +K++  E+    G
Sbjct:  216 TALALQTISRHFRCLRDAISGQILVIRKSLGGEQDGSDG 254          
BLAST of FC876672 vs. ExPASy Swiss-Prot
Match: BLH10_ARATH (BEL1-like homeodomain protein 10 OS=Arabidopsis thaliana GN=BLH10 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.403e-40
Identity = 80/153 (52.29%), Postives = 105/153 (68.63%), Query Frame = 3
Query:   75 KFRLQRKPWCEKDPVAPGTSRGET-PRLKIIDQALRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEQMYLEETKEQDNNMASSD----GATDLDDNSGRPNQTQ 518
            + ++ R+   EK   +    +GE  PRL+ +DQ LRQQRA  Q   M    WRPQRGLPE SVSVLRAWLFEHFLHPYP + +K +LA+QTGLS++QV+NWFINARVRLWKPM+E+MY EE  ++   + S       +T+ +D+S +  Q Q
Sbjct:  301 QIQIVREKLGEKGGESLDEQQGERIPRLRYLDQRLRQQRALHQQLGMVRPAWRPQRGLPENSVSVLRAWLFEHFLHPYPKESEKIMLAKQTGLSKNQVANWFINARVRLWKPMIEEMYKEEFGDESELLISKSSQEPNSTNQEDSSSQQQQQQ 453          

HSP 2 Score: 29.6462 bits (65), Expect = 4.403e-40
Identity = 13/30 (43.33%), Postives = 20/30 (66.67%), Query Frame = 2
Query:   11 SALASKAMSRHFRCLRDGIVGQIQATKKAM 100
            +++A   +SRHFR LRD I  QIQ  ++ +
Sbjct:  280 TSVALNRISRHFRALRDAIKEQIQIVREKL 309          
BLAST of FC876672 vs. ExPASy Swiss-Prot
Match: BLH3_ARATH (BEL1-like homeodomain protein 3 OS=Arabidopsis thaliana GN=BLH3 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.154e-39
Identity = 70/111 (63.06%), Postives = 87/111 (78.38%), Query Frame = 3
Query:  147 PRLKIIDQALRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEQMYLEETKEQDNNMASSDGAT 479
            PRL+ +DQ LRQQRA  Q   M    WRPQRGLPE SVS+LRAWLFEHFLHPYP + +K +L++QTGLS++QV+NWFINARVRLWKPM+E+MY EE  E    +++S+  T
Sbjct:  321 PRLRYLDQRLRQQRALHQQLGMVRPAWRPQRGLPENSVSILRAWLFEHFLHPYPKESEKIMLSKQTGLSKNQVANWFINARVRLWKPMIEEMYKEEFGESAELLSNSNQDT 431          

HSP 2 Score: 32.7278 bits (73), Expect = 2.154e-39
Identity = 19/42 (45.24%), Postives = 25/42 (59.52%), Query Frame = 2
Query:   11 SALASKAMSRHFRCLRDGIVGQIQATK-KAMVRERSRCTGHK 133
            +++A   +SRHFRCLRD I  QIQ  + K   RE S   G +
Sbjct:  278 TSVALNRISRHFRCLRDAIKEQIQVIRGKLGERETSDEQGER 319          
BLAST of FC876672 vs. ExPASy Swiss-Prot
Match: BLH6_ARATH (BEL1-like homeodomain protein 6 OS=Arabidopsis thaliana GN=BLH6 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.301e-38
Identity = 86/155 (55.48%), Postives = 100/155 (64.52%), Query Frame = 3
Query:   90 RKPWCEKDPVAPGTSRGETPRLKIIDQALRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEQMYLEETKEQDNNMASSDG---------ATDLDDNSGRPNQTQNPP 527
            RK   E+   + G   G   RLK +DQ LRQQR F     M+   WRPQRGLPE SV +LRAWLFEHFLHPYP D DK +LARQTGLSR QVSNWFINARVRLWKPMVE++Y EE  E D+N +S +          A D +D +   +Q Q  P
Sbjct:  275 RKCLGEQQDGSDGKRVGIISRLKYVDQHLRQQRGF-----MQPQAWRPQRGLPENSVLILRAWLFEHFLHPYPKDSDKIMLARQTGLSRGQVSNWFINARVRLWKPMVEEIYKEEFTENDSNSSSENTPKMSEIGPVAADDEDRAREFSQDQTKP 424          
BLAST of FC876672 vs. ExPASy Swiss-Prot
Match: BLH9_ARATH (BEL1-like homeodomain protein 9 OS=Arabidopsis thaliana GN=BLH9 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.482e-37
Identity = 65/111 (58.56%), Postives = 83/111 (74.77%), Query Frame = 3
Query:  225 WRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEQMYLEETKEQDNNMASS-----DGATDLDDNSGRPNQTQNPPADQKP 542
            WRP RGLPER+V+VLRAWLF+HFLHPYP+D DK +LA+QTGLSR+QVSNWFINARVR+WKPMVE++++ ET++   + +SS        T   DNS   N   +  A Q+P
Sbjct:  349 WRPHRGLPERAVTVLRAWLFDHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETRQSQRSSSSSWRDERTSTTVFPDNSN--NNPSSSSAQQRP 457          

HSP 2 Score: 41.2022 bits (95), Expect = 1.482e-37
Identity = 17/48 (35.42%), Postives = 31/48 (64.58%), Query Frame = 2
Query:   17 LASKAMSRHFRCLRDGIVGQIQATKKAMVRERSRCTGHKQRRNTKTEN 160
            LA KA+S+HF+CL++ I  Q+Q +    ++++ +C GH      KT++
Sbjct:  274 LALKALSKHFKCLKNAITDQLQFSHNNKIQQQQQC-GHPMNSENKTDS 320          
BLAST of FC876672 vs. ExPASy Swiss-Prot
Match: BLH8_ARATH (BEL1-like homeodomain protein 8 OS=Arabidopsis thaliana GN=BLH8 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.445e-32
Identity = 68/111 (61.26%), Postives = 85/111 (76.58%), Query Frame = 3
Query:  213 ESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEQMYLEETKEQDNNMASSDGATDLDDNSGRPNQTQNPPADQKPT 545
            + H WRPQRGLPER+V+VLRAWLF+HFLHPYP+D DK +LA QTGLSR+QVSNWFINARVRLWKPMVE+++  ETK   N    +D + +++  S RPN   +P  +Q  T
Sbjct:  421 QQHIWRPQRGLPERAVAVLRAWLFDHFLHPYPTDSDKQMLATQTGLSRNQVSNWFINARVRLWKPMVEEIHTLETKAIKN----ADTSHNIEP-SNRPNTVSSPSHEQTLT 526          
The following BLAST results are available for this feature:
BLAST of FC876672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
BEL1_ARATH1.321e-6162.34Homeobox protein BEL1 homolog OS=Arabidopsis thali... [more]
BLH4_ARATH1.385e-5163.04BEL1-like homeodomain protein 4 OS=Arabidopsis tha... [more]
BLH2_ARATH6.790e-5163.04BEL1-like homeodomain protein 2 OS=Arabidopsis tha... [more]
BLH1_ARATH1.153e-5063.40BEL1-like homeodomain protein 1 OS=Arabidopsis tha... [more]
BLH7_ARATH3.206e-4468.47BEL1-like homeodomain protein 7 OS=Arabidopsis tha... [more]
BLH10_ARATH4.403e-4052.29BEL1-like homeodomain protein 10 OS=Arabidopsis th... [more]
BLH3_ARATH2.154e-3963.06BEL1-like homeodomain protein 3 OS=Arabidopsis tha... [more]
BLH6_ARATH2.301e-3855.48BEL1-like homeodomain protein 6 OS=Arabidopsis tha... [more]
BLH9_ARATH1.482e-3758.56BEL1-like homeodomain protein 9 OS=Arabidopsis tha... [more]
BLH8_ARATH1.445e-3261.26BEL1-like homeodomain protein 8 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1BA09RM1 EHR Citrus clementina cDNA clone KN0AAN1BA09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876672 ID=FC876672; Name=FC876672; organism=Citrus clementina; type=EST; length=736bp
GCACGAGGATTCAGCTTTGGCTTCCAAGGCCATGTCAAGGCATTTTAGAT
GTTTAAGAGATGGGATTGTTGGTCAAATTCAGGCTACAAAGAAAGCCATG
GTGCGAGAAAGATCCCGTTGCACCGGGCACAAGCAGAGGCGAAACACCAA
GACTGAAAATCATTGATCAAGCCTTGAGACAACAACGAGCTTTTCAGCAG
ATGAGCATGATGGAGAGTCACCCGTGGAGACCTCAAAGGGGCCTGCCTGA
AAGATCCGTATCCGTGCTTCGTGCTTGGTTGTTCGAACATTTTCTTCATC
CGTACCCAAGCGATGTTGATAAACATATCTTAGCCCGCCAAACTGGCCTT
TCGAGAAGCCAGGTGTCCAATTGGTTCATTAATGCAAGAGTGAGGCTATG
GAAACCCATGGTGGAACAAATGTACTTAGAAGAAACAAAGGAGCAAGACA
ACAACATGGCATCTTCCGACGGTGCTACTGATCTTGATGACAATAGTGGC
CGGCCAAATCAGACTCAAAATCCTCCTGCTGATCAAAAACCCACACAGGA
TCAACTTGTTCGAATTGACTCGGAATGTCTGTCTTCCATTATCAATAATC
ATGATAAGAATGACGCTAACAAAAACCCTAACAAAGCCCTTCCAAGTCAC
CACATGCAACAAAATTTTGGGTCATTTGGAGCCATGGAGTTGGATTTTTC
GTCTTACAATCAGCACACTGTGGGGTGGGGTTTCTT
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