FC876723

Overview
NameFC876723
Unique NameFC876723
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length770
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876723 vs. ExPASy Swiss-Prot
Match: WRK11_ARATH (Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 9.861e-43
Identity = 105/214 (49.07%), Postives = 122/214 (57.01%), Query Frame = 2
Query:  131 MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKFKKVISLLNRTGHARFRRGPVHXXXXXXXXXXXXXXXXGNSPHXXXXXXXXXXXXXXXXXXXXSYVQSQPHSLTLDFTKPSLFSGNVKSTELEXXXXXXXXXXXXXXXXXAITGDGSVSNGKQGGSSIFL--APQAPAVSAGKPPLAAQPYKKRC 763
            MAV+LM FPK  ++DQTAIQEAA+QG++SMEHLIR++S+     H VDCS++TD TVSKFK VISLLNRTGHARFRRGPVH                   P                       +   P S+TLDF+KPS+F    KS ELE                 AITGDGSVSNGK     IFL  AP  P  S+GKPPLA  PY+KRC
Sbjct:    1 MAVDLMRFPK--IDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHNVDCSEITDFTVSKFKTVISLLNRTGHARFRRGPVHSTSSAASQKLQSQIVKNTQPE----------APIVRTTTNHPQIVPPPSSVTLDFSKPSIFGTKAKSAELEFSKENFSVSLNSSFMSSAITGDGSVSNGK-----IFLASAPLQPVNSSGKPPLAGHPYRKRC 197          
BLAST of FC876723 vs. ExPASy Swiss-Prot
Match: WRK17_ARATH (Probable WRKY transcription factor 17 OS=Arabidopsis thaliana GN=WRKY17 PE=1 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.682e-42
Identity = 104/214 (48.60%), Postives = 126/214 (58.88%), Query Frame = 2
Query:  131 MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFKKVISLLNRTGHARFRRGPVHXXXXXXXXXXXXXXXXGNSPHXXXXXXXXXXXXXXXXXXXXSYVQSQPHSLTLDFTKPSLFSGNVKSTE-LEXXXXXXXXXXXXXXXXXAITGDGSVSNGKQGGSSIFL--APQAPAVSAGKPPLAAQPYKKRC 763
            M V++M  PK  MEDQTAIQEAA+QG+KSMEHLIR++S+     +VDCS++TD TVSKFKKVISLLNR+GHARFRRGPVH                 +S                      S+VQ+   S+TLDFT+PS+F    KS+E +E                 AITGDGSVS     GSSIFL  AP  P  S+GKPPL+  PY+KRC
Sbjct:    1 MTVDIMRLPK--MEDQTAIQEAASQGLKSMEHLIRVLSNRPEERNVDCSEITDFTVSKFKKVISLLNRSGHARFRRGPVHSPP--------------SSSVPPPVKVTTPAPTQISAPAPVSFVQANQQSVTLDFTRPSVFGAKTKSSEVVEFAKESFSVSSNSSFMSSAITGDGSVSK----GSSIFLAPAPAVPVTSSGKPPLSGLPYRKRC 194          
The following BLAST results are available for this feature:
BLAST of FC876723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
WRK11_ARATH9.861e-4349.07Probable WRKY transcription factor 11 OS=Arabidops... [more]
WRK17_ARATH1.682e-4248.60Probable WRKY transcription factor 17 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAN3AC03RM1 EHR Citrus clementina cDNA clone KN0AAN3AC03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876723 ID=FC876723; Name=FC876723; organism=Citrus clementina; type=EST; length=770bp
GCACGAGGCCTCCACCCTCGCAGCCTCAGCCTTAAGTTTTACTTTTTCAA
AGGGTTTCGTCGAATGACATCTTGAGGCTTTTCCAAATTGCTCTCCTTTG
GTAGCAGAAACTTTTTCGTTTTTCTAAATCATGGCGGTGGAGCTGATGGG
ATTTCCAAAAAGGATGATGGAAGATCAGACGGCGATACAAGAAGCTGCAA
CGCAAGGGATCAAAAGCATGGAGCACCTGATCCGTCTCATGTCTCATCAC
CAATCCTCGAATCACGTTGACTGCTCGGACCTCACCGATCTCACCGTCTC
TAAGTTCAAAAAAGTCATTTCCCTGCTCAACCGAACCGGTCACGCCCGGT
TCAGGCGCGGGCCGGTTCACTCTTCGCCTTCATCTTCATCTGCATCTGCG
CCAGCCGCCGCCGCCTCAGGCAACTCTCCGCACACACAGACCTTAACTCT
TACTCCGCCTGCTCCTACGATGGCTGTCGCTCCCTCTACGGCGAGTTACG
TCCAGTCACAGCCGCACAGTCTGACTCTTGATTTTACAAAACCTAGTTTG
TTTAGCGGAAACGTCAAGAGCACTGAGCTCGAGTTTTCCAAAGACAGCTT
CTGTGTGTCGTCGAACTCGTCCTTCATGTCCTCTGCTATCACCGGAGACG
GCAGCGTTTCGAACGGGAAGCAAGGAGGATCTTCGATCTTCCTGGCGCCA
CAAGCTCCTGCTGTTTCCGCTGGAAAGCCGCCGCTCGCGGCTCAGCCTTA
CAAGAAGAGGTGTCAAGATC
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