FC876749

Overview
NameFC876749
Unique NameFC876749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length655
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10415 contig Ccv1_Contig10415:1..655. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.185e-40
Identity = 75/145 (51.72%), Postives = 101/145 (69.66%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVK-VAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F++I +  GI TE++YPYK  +GTC+ ++V  +A  I   E+V  NDE ALL+AVA QPVS+ I+  G DFQ Y  G+F   C T  +H VAIVG+G T DG  YW+++NSWG +WGE GY+R+ R++   EGLCGIA  PSYP+
Sbjct:  200 FEFIKQKGGITTESNYPYKAQEGTCDASKVNDLAVSIDGHENVPANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGDCSTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEHGYIRMQRNISKKEGLCGIAMLPSYPI 344          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.882e-40
Identity = 76/145 (52.41%), Postives = 98/145 (67.59%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKV-AAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F++I +  GI TEA+YPY+   GTC+ ++    A  I   E+V  NDE ALL+AVA QPVS+ I+  G DFQ Y  G+F   CGT+  H VAIVG+G T DG KYW +KNSWG +WGE GY+R+ R +   EGLCGIA + SYP+
Sbjct:  198 FEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPI 342          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.310e-39
Identity = 73/145 (50.34%), Postives = 100/145 (68.97%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVK-VAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F++I +  GI TE++YPY   +GTC++++V  +A  I   E+V  NDE ALL+AVA QPVS+ I+  G DFQ Y  G+F   C T  +H VAIVG+G T DG  YW+++NSWG +WGE GY+R+ R++   EGLCGIA   SYP+
Sbjct:  200 FEFIKQKGGITTESNYPYTAQEGTCDESKVNDLAVSIDGHENVPVNDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGDCNTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEQGYIRMQRNISKKEGLCGIAMMASYPI 344          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.919e-39
Identity = 77/145 (53.10%), Postives = 99/145 (68.28%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKV-AAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F+++IKN GI TE DYPYKE  G C+  +      KI ++EDV  N+E+AL +AVA QPVSI +E  G DFQ YK GIF   CGT   H V I G+G TE+GM YW+++NSWG    E GY+R+ R+V +  GLCG+A +PSYPV
Sbjct:   90 FEFVIKNGGIDTEEDYPYKERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGKCGTAVDHGVVIAGYG-TENGMDYWIVRNSWGANCRENGYLRVQRNVSSSSGLCGLAIEPSYPV 233          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.493e-39
Identity = 76/147 (51.70%), Postives = 103/147 (70.07%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAK---ISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F++IIKN GI T+ DYPYK V GTC+  Q++  AK   I ++EDV    E++L +AVA QP+SI IE  G  FQ Y  GIF+  CGTQ  H V  VG+G TE+G  YW+++NSWG+ WGE+GY+R+ R++ +  G CGIA +PSYP+
Sbjct:  209 FEFIIKNGGIDTDKDYPYKGVDGTCD--QIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIFDGSCGTQLDHGVVAVGYG-TENGKDYWIVRNSWGKSWGESGYLRMARNIASSSGKCGIAIEPSYPI 352          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.449e-38
Identity = 76/145 (52.41%), Postives = 96/145 (66.21%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKV-AAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F++I KN GI TE  YPY E  GTC    +      I   +DV  N+E AL+QAVA QP+S+ IE SG  FQ Y  G+F   CGT+  H VAIVG+GAT DG KYW++KNSWGE+WGE+GY+R+ R +    G CGIA + SYP+
Sbjct:  202 FEFIQKN-GITTEDSYPYAEQDGTCASNLLNSPVVSIDGHQDVPANNENALMQAVANQPISVSIEASGYGFQFYSEGVFTGRCGTELDHGVAIVGYGATRDGTKYWIVKNSWGEEWGESGYIRMQRGISDKRGKCGIAMEASYPI 345          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.092e-37
Identity = 73/148 (49.32%), Postives = 92/148 (62.16%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVK----VAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F+YI  N G+ TEA YPY+  +GTC  A+      V   I   +DV  N E+ L +AVA QPVS+ +E SG  F  Y  G+F   CGT+  H VA+VG+G  EDG  YW +KNSWG  WGE GY+R+ +D  A  GLCGIA + SYPV
Sbjct:  206 FEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGDCGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPV 353          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 2.732e-37
Identity = 73/144 (50.69%), Postives = 96/144 (66.67%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCE-DAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F +IIKN GI TE DYPYK V G C+ + +      I  FEDV  NDE++L +AVA QPVS+ IE  G +FQ Y  G+F+  CGT   H V  VG+G T++G  YW+++NSWG KWGE+GY+R+ R+++   G CGIA   SYP
Sbjct:  214 FDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGRCGTSLDHGVVAVGYG-TDNGKDYWIVRNSWGPKWGESGYVRMERNINVTTGKCGIAMMASYP 356          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.732e-37
Identity = 73/148 (49.32%), Postives = 92/148 (62.16%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVK----VAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F+YI  N G+ TEA YPY+  +GTC  A+      V   I   +DV  N E+ L +AVA QPVS+ +E SG  F  Y  G+F   CGT+  H VA+VG+G  EDG  YW +KNSWG  WGE GY+R+ +D  A  GLCGIA + SYPV
Sbjct:  206 FEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGECGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPV 353          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.313e-36
Identity = 72/144 (50.00%), Postives = 98/144 (68.06%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVA-AKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+YII   G+  E DYPY   +G C++ +  V    IS +EDV  ND+++L++A+A QPVS+ IE SG DFQ YKGG+FN  CGT   H VA VG+G+++ G  Y ++KNSWG +WGE G++R+ R+   PEGLCGI    SYP
Sbjct:  209 FQYIISTGGLHKEDDYPYLMEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNGKCGTDLDHGVAAVGYGSSK-GSDYVIVKNSWGPRWGEKGFIRMKRNTGKPEGLCGINKMASYP 351          
The following BLAST results are available for this feature:
BLAST of FC876749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CYSEP_PHAVU1.185e-4051.72Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CYSEP_RICCO5.882e-4052.41Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CYSEP_VIGMU1.310e-3950.34Vignain OS=Vigna mungo PE=1 SV=1[more]
CYSPL_SOLLC2.919e-3953.10Low-temperature-induced cysteine proteinase (Fragm... [more]
RD21A_ARATH8.493e-3951.70Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CYSP_HEMSP1.449e-3852.41Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CYSP1_HORVU2.092e-3749.32Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
ORYB_ORYSJ2.732e-3750.69Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CYSP2_HORVU2.732e-3749.32Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
XCP1_ARATH2.313e-3650.00Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3AD10RM1 EHR Citrus clementina cDNA clone KN0AAN3AD10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876749 ID=FC876749; Name=FC876749; organism=Citrus clementina; type=EST; length=655bp
TTCGGCACGAGGCTTTAAATATATTATAAAAAACCAGGGTATTGCCACAG
AAGCGGATTATCCATACAAGGAAGTCCAAGGAACTTGTGAAGACGCACAG
GTCAAGGTAGCTGCTAAAATTAGTAACTTTGAAGATGTAAAACCCAATGA
TGAGCAGGCTTTACTCCAAGCTGTAGCCATGCAGCCAGTATCAATTTGCA
TTGAAGGAAGTGGACCAGACTTCCAGAGCTACAAAGGCGGTATTTTTAAC
CGAGGATGTGGAACTCAGTGTTCTCATGCTGTTGCTATCGTTGGATTTGG
GGCAACTGAAGATGGAATGAAGTATTGGTTAATTAAGAATTCATGGGGGG
AGAAATGGGGTGAGGCCGGCTACATGAGGATTCTCAGAGATGTTGATGCA
CCTGAAGGTCTTTGTGGCATTGCCACTAAACCTTCCTACCCAGTTGCATG
AGTAGCAGTATTTTATATTATATTATTATTAGCCGCCTCTTAATAATGAT
GTCTTCAAGCCTACACATGCATTAGCCTCGAAAGGCTTATACGAACCGTA
TGAATCGTATGATTCTTTGGTTTTATCTATGTTGAGTATTTCATAAGTTG
TAATTGAACGCCAATATTTGGTATTAGTTAATGTTAAATCTCTCATTTAA
GTAAA
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