FC876750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876750 vs. ExPASy Swiss-Prot
Match: CNG20_ARATH (Probable cyclic nucleotide-gated ion channel 20, chloroplastic OS=Arabidopsis thaliana GN=CNGC20 PE=2 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 1.495e-90 Identity = 162/239 (67.78%), Postives = 190/239 (79.50%), Query Frame = 1 Query: 10 ILLVLPNILGSSGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSIQDCKKFLDCGHGNGGAEYSQDQTWKSWSGNQQASDCFEKDKFSYGIYEQAVKLTTENSIITRYVYSLFWGFQQISTLAGNQTPSYFVGEVLFTMAIIGVGLLLFAFLIGNMQNFLQALVKRRLDMSLRRRDVEQWMRHRRLPE 726 IL ++P LG+SGANYAKNLLRAA+L QYIP+LY+ LP AGQ+ TGFIFESAWANF INL TF L+GH+VGS WYLFGLQRVNQCLR+AC N ++C+ +DCG+GN S +W N A+ CF++D F YGIY +AV LT +++ TRY YSLFWGFQQISTLAGNQ PSYF+GEV FTM IIG+GLLLFA LIGNMQNFLQAL KR L+M+LRRRDVEQWM HRRLP+ Sbjct: 311 ILWIIPAHLGASGANYAKNLLRAAVLFQYIPKLYRLLPFLAGQTPTGFIFESAWANFVINLLTFMLAGHVVGSCWYLFGLQRVNQCLRNACGNFG-RECQDLIDCGNGN-----SSVLVRATWKDNASANACFQEDGFPYGIYLKAVNLTNHSNLFTRYSYSLFWGFQQISTLAGNQVPSYFLGEVFFTMGIIGLGLLLFALLIGNMQNFLQALGKRNLEMTLRRRDVEQWMSHRRLPD 543
BLAST of FC876750 vs. ExPASy Swiss-Prot
Match: CNG19_ARATH (Putative cyclic nucleotide-gated ion channel 19 OS=Arabidopsis thaliana GN=CNGC19 PE=2 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.150e-74 Identity = 139/239 (58.16%), Postives = 175/239 (73.22%), Query Frame = 1 Query: 10 ILLVLPNILGSSGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSIQDCKKFLDCGHGNGGAEYSQDQTWKSWSGNQQASDCFEKDKFSYGIYEQAVKLTTENSIITRYVYSLFWGFQQISTLAGNQTPSYFVGEVLFTMAIIGVGLLLFAFLIGNMQNFLQALVKRRLDMSLRRRDVEQWMRHRRLPE 726 IL ++P LG+ K +LRA +L QYIP+LY+ LPL AGQ+STGFIFESAWANF INL TF L+GH VGS WYL LQRV +C+ +A N S + + +DC G+ ++ +D W N + CF+++ ++YGIY +AV LT E+S TR+ YSL+WGFQQISTLAGN +PSY VGEV FTM IIG+GLLLFA LIGNM NFLQ+L +RR++M LR+RDVEQWM HRRLPE Sbjct: 277 ILRIIPLHLGTRREESEKQILRATVLFQYIPKLYRLLPLLAGQTSTGFIFESAWANFVINLLTFMLAGHAVGSCWYLSALQRVKKCMLNAW-NISADERRNLIDCARGSYASKSQRDL----WRDNASVNACFQENGYTYGIYLKAVNLTNESSFFTRFSYSLYWGFQQISTLAGNLSPSYSVGEVFFTMGIIGLGLLLFARLIGNMHNFLQSLDRRRMEMMLRKRDVEQWMSHRRLPE 510
BLAST of FC876750 vs. ExPASy Swiss-Prot
Match: CNG15_ARATH (Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana GN=CNGC15 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.087e-40 Identity = 95/242 (39.26%), Postives = 137/242 (56.61%), Query Frame = 1 Query: 10 ILLVLPNILGSSGANYAKNLLRAAILLQYIPRLYKFLPLFAGQ-SSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSIQDCK-KFLDCGHGNGGAEYSQDQTWKSWSGNQQASDCFEKDKF-SYGIYEQAVKLT-TENSIITRYVYSLFWGFQQISTLAGNQTPSYFVGEVLFTMAIIGVGLLLFAFLIGNMQNFLQALVKRRLDMSLRRRDVEQWMRHRRLP 723 I +++PN+ GS N KN+LR I+ QY+PR++ PL +TG + E+AWA NL + L+ H++G+ WYL ++R C R AC N Q C+ +F +C E Q +W WS + C KF +GI+ AV T T + I +Y Y L+WG + +S+L N S + GE+LF + I +GL+LFA LIGNMQ +LQ+ R + +RR D EQWM HR+LP Sbjct: 186 IWIIIPNLRGSPMTN-TKNVLRFIIIFQYVPRMFLIFPLSRQIIKATGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERQEACWRHAC-NIEKQICQYRFFECRR----LEDPQRNSWFEWSNI--TTICKPASKFYEFGIFGDAVTSTVTSSKFINKYFYCLWWGLKNLSSLGQNLATSTYAGEILFAIIIATLGLVLFALLIGNMQTYLQSTTMRLEEWRIRRTDTEQWMHHRQLP 419
BLAST of FC876750 vs. ExPASy Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.017e-38 Identity = 92/237 (38.82%), Postives = 132/237 (55.70%), Query Frame = 1 Query: 40 SSGANY--AKNLLRAAILLQYIPRLYKFLPLFAGQSSTGFIF-ESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSIQDCKKFLDCGHGNGGAEYSQDQTWKSWSGNQQASDC----FEKDKFSYGIYEQAVK--LTTENSIITRYVYSLFWGFQQISTLAGNQTPSYFVGEVLFTMAIIGVGLLLFAFLIGNMQNFLQALVKRRLDMSLRRRDVEQWMRHRRLP 723 S GA+ K LR+ IL+QYIPR + PL + T +F E+AWA L + L+ HIVG+ WYL L+R N C C NSS+ + FL CG+ + W + + +C + F +GIY +A+ + + S +++Y + L+WG Q +STL S + GEV+F++A+ GLLLFA LIGNMQ +LQ+L R +M ++RRD EQWM HR LP Sbjct: 229 SKGASVLATKRALRSIILVQYIPRFIRLYPLSSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAIWYLLALERYNGCWTKVCSNSSLDCHRNFLFCGN----EKMDGYAAWTTIKDSVLQLNCPVNTTDNPPFDFGIYLRALSSGIVSSKSFVSKYFFCLWWGLQNLSTLGQGLETSTYPGEVIFSIALAIAGLLLFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLP 461
BLAST of FC876750 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 1.328e-38 Identity = 94/236 (39.83%), Postives = 136/236 (57.63%), Query Frame = 1 Query: 40 SSGANY--AKNLLRAAILLQYIPRLYKFLPLFAGQSSTGFIF-ESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSIQDC-KKFLDCGHGNGGAEYSQDQTWKSWSGNQQASDCFEKDK--FSYGIYEQAVK--LTTENSIITRYVYSLFWGFQQISTLAGNQTPSYFVGEVLFTMAIIGVGLLLFAFLIGNMQNFLQALVKRRLDMSLRRRDVEQWMRHRRLP 723 S GAN K LR +L+QYIPR + PL + T +F E+AWA L + L+ HIVG+ WYL L+R N C ACHN+ Q+C + FL CG+ N + D S+ + + E ++ F +GIY +A+ + + + +++Y + L+WG Q +STL S + GEV+F++ + GLLLFA LIGNMQ +LQ+L R +M ++RRD EQWM HR LP Sbjct: 229 SRGANVLATKQALRYIVLVQYIPRFLRMYPLSSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGALWYLLALERNNDCWSKACHNN--QNCTRNFLFCGNQNMKGYAAWDNIKVSYLQLKCPVNVPEDEEPPFDFGIYLRALSSGIVSSKNFVSKYFFCLWWGLQNLSTLGQGLETSTYPGEVIFSITLAIAGLLLFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLP 462
BLAST of FC876750 vs. ExPASy Swiss-Prot
Match: CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 3.865e-38 Identity = 93/239 (38.91%), Postives = 131/239 (54.81%), Query Frame = 1 Query: 37 GSSGANY--AKNLLRAAILLQYIPRLYKFLPLFAGQSSTGFIF-ESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACH-NSSIQDCKKFLDCGHGNGGAEYSQDQTWKSWSGNQQASDCFEKD---KFSYGIYEQAVK--LTTENSIITRYVYSLFWGFQQISTLAGNQTPSYFVGEVLFTMAIIGVGLLLFAFLIGNMQNFLQALVKRRLDMSLRRRDVEQWMRHRRLPE 726 GS G + K L ++ QYIPR +F+PL + T F E AWA L + L+ HI G+ WY+ ++R + CLR AC + C + L CG S++ W + ++C K KF+YGIY QAV + + + +++ Y L+WG Q +STL S + GEVLF++AI GLLLFA LIGNMQ +LQ+L R +M ++RRD EQWM HR LP+ Sbjct: 222 GSKGTDVLPTKQALLHIVITQYIPRFVRFIPLTSELKKTAGAFAEGAWAGAAYYLLWYMLASHITGAFWYMLSVERNDTCLRSACKVQPDPKVCVQILYCG---SKLMSSRETDWIKSVPDLFKNNCSAKSDESKFNYGIYSQAVSSGIVSSTTFFSKFCYCLWWGLQNLSTLGQGLQTSTYPGEVLFSIAIAVAGLLLFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRSLPQ 457
BLAST of FC876750 vs. ExPASy Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.469e-37 Identity = 84/242 (34.71%), Postives = 131/242 (54.13%), Query Frame = 1 Query: 10 ILLVLPNILGSSGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSST-GFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSIQDCKKFLDCGHGNGGAEYSQDQTWKSWSGNQQASDCFEKDKFSYGIYEQAVK--LTTENSIITRYVYSLFWGFQQISTLAGNQTPSYFVGEVLFTMAIIGVGLLLFAFLIGNMQNFLQALVKRRLDMSLRRRDVEQWMRHRRLPE 726 IL+++P++ GSS N KN+L+ + QYIPR + PL+ + T G + E+AWA NLF + L+ H+ G+ WYLF ++R C + AC ++ K L C G +++ + N F +GI+ A++ + ++ Y +WG Q +S+L N S ++ E+ F + I GL+LF+FLIGNMQ +LQ+ R +M ++RRD EQWM HR LPE Sbjct: 203 ILIIIPHMRGSSSLN-TKNMLKFIVFFQYIPRFIRIYPLYKEVTRTSGILTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETVCWKQACERNNPPCISKLLYCDPETAGGNAFLNESCPIQTPNTTL--------FDFGIFLDALQSGVVESQDFPQKFFYCFWWGLQNLSSLGQNLKTSTYIWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPE 435
BLAST of FC876750 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.581e-37 Identity = 93/239 (38.91%), Postives = 130/239 (54.39%), Query Frame = 1 Query: 37 GSSGANY--AKNLLRAAILLQYIPRLYKFLPLFAGQSSTGFIF-ESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACH-NSSIQDCKKFLDCGHGNGGAEYSQDQTWKSWSGNQQASDCFEK---DKFSYGIYEQAVK--LTTENSIITRYVYSLFWGFQQISTLAGNQTPSYFVGEVLFTMAIIGVGLLLFAFLIGNMQNFLQALVKRRLDMSLRRRDVEQWMRHRRLPE 726 GS G++ K L +++QYIPR +F+PL + T F E AWA L + L+ HI G+ WY+ ++R + C R AC + C + L CG S + W S+C K KF+YGIY QA+ + + + +++ Y L+WG Q +STL S F GEVLF++AI GLLLFA LIGNMQ +LQ+L R +M ++RRD EQWM HR LP+ Sbjct: 216 GSKGSDVLPTKTALLNIVIVQYIPRFVRFIPLTSELKKTAGAFAEGAWAGAAYYLLWYMLASHITGAFWYMLSVERNDTCWRFACKVQPDPRLCVQILYCGTKFVS---SGETEWIKTVPELLKSNCSAKADDSKFNYGIYGQAISSGIVSSTTFFSKFCYCLWWGLQNLSTLGQGLQTSTFPGEVLFSIAIAIAGLLLFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRSLPQ 451
BLAST of FC876750 vs. ExPASy Swiss-Prot
Match: CNG17_ARATH (Probable cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana GN=CNGC17 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.519e-37 Identity = 84/230 (36.52%), Postives = 131/230 (56.96%), Query Frame = 1 Query: 52 NYAKNLLRAAILLQYIPRLYKFLPLFAG-QSSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSIQ-DCKKF-LDCGHGNGGAEYSQDQ-TWKSWSGNQQASDCFEKDKFSYGIYEQAV-KLTTENSIITRYVYSLFWGFQQISTLAGNQTPSYFVGEVLFTMAIIGVGLLLFAFLIGNMQNFLQALVKRRLDMSLRRRDVEQWMRHRRLPE 726 ++ N + +LLQYIPR Y +PL + +TG + ++AWA NL + L+ H++G+ WY+ + R C + C+ + Q +C+ + LDC + Y +Q TW + + + D +F YGI+ A+ K + RY Y L+WG QQ+S+ N + + F+GE F + I GL+LFA LIGNMQ +LQ+L R + L++RD E+WMRHR+LPE Sbjct: 207 DHNNNAIALIVLLQYIPRFYLIIPLSSQIVKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYILSVDRYTSCWKSRCNGEAGQVNCQLYYLDCD-----SMYDNNQMTWANVTKVFKLCDA-RNGEFKYGIFGNAITKNVVSSQFFERYFYCLWWGLQQLSSYGQNLSTTMFMGETTFAVLIAIFGLVLFAHLIGNMQTYLQSLTVRLEEWRLKKRDTEEWMRHRQLPE 430
BLAST of FC876750 vs. ExPASy Swiss-Prot
Match: CNG14_ARATH (Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana GN=CNGC14 PE=2 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 3.062e-35 Identity = 86/240 (35.83%), Postives = 131/240 (54.58%), Query Frame = 1 Query: 19 VLPNILGSSGANYAKNLLRAAILLQYIPRLYKFLPLFAGQ-SSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSI--QDCKKFLDCGHGNGGAEYSQDQTWKSWSGNQQASDCFEKDKFSYGIYEQAV-KLTTENSIITRYVYSLFWGFQQISTLAGNQTPSYFVGEVLFTMAIIGVGLLLFAFLIGNMQNFLQALVKRRLDMSLRRRDVEQWMRHRRLPE 726 +LP+I SS +++ N L +L+QYIPRLY PL A +TG + +AWA NL + L+ HI+GS WYL ++R C + CH S+ Q F DCG W++ + D +F++GI+ A+ K + + +Y+Y L++G Q +S+ N + S V E +F + + GL+LFA LIGNMQ +LQ++ R + L+RRD E+WM HR LP+ Sbjct: 196 ILPSIR-SSHSDHTTNALVLIVLVQYIPRLYLIFPLSAEIIKATGVVTTTAWAGAAYNLLQYMLASHILGSAWYLLSIERQATCWKAECHKESVPLQCVTDFFDCGT----LHRDDRNNWQNTTVVFSNCDPSNNIQFTFGIFADALTKNVVSSPFLEKYLYCLWFGLQNLSSYGQNLSTSTSVLETMFAILVAIFGLVLFALLIGNMQTYLQSITVRLEEWRLKRRDTEEWMGHRLLPQ 430 The following BLAST results are available for this feature:
BLAST of FC876750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876750 ID=FC876750; Name=FC876750; organism=Citrus clementina; type=EST; length=728bpback to top |