FC876816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876816 vs. ExPASy Swiss-Prot
Match: TRM61_MOUSE (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Mus musculus GN=Trmt61a PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.830e-36 Identity = 80/181 (44.20%), Postives = 112/181 (61.88%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHTTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVISFVTVGVRDIQCHGFPDEFTGLPDSIFLDL 669 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V ++GG+VY+L PTPELWT+ L H TQILY DI+ + M LEL PG +V R+VAPTGH++T +FH+QRA ARE+F+ + +VTV +D+ C GF + D++FLD+ Sbjct: 4 VAYEELIKEGDTAILSLGHGSMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVICSRGGWVYVLHPTPELWTVNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRSVAPTGHLHTVEFHQQRADKAREEFQEHRLSQWVTVHTQDVCCSGF--GVVHVADAVFLDI 182
BLAST of FC876816 vs. ExPASy Swiss-Prot
Match: TRM61_RAT (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Rattus norvegicus GN=Trmt61a PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.451e-35 Identity = 79/181 (43.65%), Postives = 112/181 (61.88%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHTTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVISFVTVGVRDIQCHGFPDEFTGLPDSIFLDL 669 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V ++GG+VY+L PTPELWT+ L H TQILY DI+ + M LEL PG +V R++APTGH++T +FH+QRA ARE+F++ V +VTV +D+ GF + D++FLD+ Sbjct: 4 VAYEELIKEGDTAILSLGHGSMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCSRGGWVYVLHPTPELWTVNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRSIAPTGHLHTVEFHQQRADKAREEFQQHRVSQWVTVHTQDVCRSGF--GVVHVADAVFLDI 182
BLAST of FC876816 vs. ExPASy Swiss-Prot
Match: TRM61_HUMAN (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Homo sapiens GN=TRMT61A PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.451e-35 Identity = 80/181 (44.20%), Postives = 110/181 (60.77%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHTTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVISFVTVGVRDIQCHGFPDEFTGLPDSIFLDL 669 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V +GG+VY+L PTPELWTL L H TQILY DI+ + M LEL PG +V R +APTGH++T +FH+QRA ARE+F+ V +VTV +D+ GF + + D++FLD+ Sbjct: 4 VAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGF--GVSHVADAVFLDI 182
BLAST of FC876816 vs. ExPASy Swiss-Prot
Match: TRM61_BOVIN (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Bos taurus GN=TRMT61A PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.922e-34 Identity = 80/181 (44.20%), Postives = 110/181 (60.77%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHTTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVISFVTVGVRDIQCHGFPDEFTGLPDSIFLDL 669 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V +GG+VY+L PTPELWTL L H TQILY DI+ + M LEL PG +V R +APTGH++T +FH+QRA ARE+F+ V +VTV +D+ GF + + D++FLD+ Sbjct: 4 VAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALLTMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAERAREEFQEHRVGRWVTVLNQDVCRSGF--GVSHVADAVFLDI 182
BLAST of FC876816 vs. ExPASy Swiss-Prot
Match: TRM61_DICDI (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trmt61a OS=Dictyostelium discoideum GN=trmt61a PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.726e-30 Identity = 71/180 (39.44%), Postives = 107/180 (59.44%), Query Frame = 1 Query: 142 RCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHTTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVISFVTVGVRDIQC--HGF-PDEFTGLPDSIFLDL 669 + IKEGD V++Y D M + + N+ + ++FG+++H + IGK +GS + S+ G GF +++A TPELW++ L H TQIL+ DIS +I LEL G AR +AP GH++TF+FHE+R AR+DF+ G+ ++TV RD C GF + D++FLDL Sbjct: 6 KIIKEGDRVVMYNGKDNMAVLTMESNNVYNSKFGSYRHKNIIGKEYGSKLSSDNGNGFCHVIAMTPELWSITLDHRTQILFNLDISTIIFNLELKNGSRAVESGTGSGSLSSSIARTIAPKGHLFTFEFHEERVKFARKDFKDNGLDQYITVTHRD-ACGKEGFLRQDINNDIDAVFLDL 184
BLAST of FC876816 vs. ExPASy Swiss-Prot
Match: TRM61_KLULA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Kluyveromyces lactis GN=TRM61 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.995e-26 Identity = 72/197 (36.55%), Postives = 103/197 (52.28%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVF-----SNKGGFVYLLAPTPELWTLVLSHTTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVISF--VTVGVRDIQCHGF--------PDEFTG--------LPDSIFLDL 669 IKEGDLV+ + D +K + V F R+GAF HSD IGKPFGS + SN+ GF+++L PTPELW++ L H TQI+Y D S+++ +E P V AR+ GH+++++FHE R A+++F+ G++ T+ RD+ GF EF G D IFLDL Sbjct: 11 IKEGDLVLAWLSRDNLKPITVKAGEVFNTRYGAFSHSDMIGKPFGSQIAIRTKGSNRFGFIHVLQPTPELWSISLPHRTQIVYTPDSSYIMQRMECNPRSRVIEAGTGSGSFSHAFARS---AGHLFSYEFHEVRYEQAKQEFKEHGLLEAGNTTITHRDVCKDGFEIKNGDTTSHEFRGPEETKVELNADCIFLDL 204
BLAST of FC876816 vs. ExPASy Swiss-Prot
Match: TRM61_YEAST (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Saccharomyces cerevisiae GN=GCD14 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.479e-25 Identity = 66/165 (40.00%), Postives = 92/165 (55.76%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVF-----SNKGGFVYLLAPTPELWTLVLSHTTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVI-SFVTVGVRDIQCHGF 624 IKEGDL +++ D +K V++ F R+G+F H D IGKP+GS + SNK FV++L PTPELWTL L H TQI+Y D S+++ L P V AR+V GH+++F+FH R A E+F+ G+I VT+ RD+ GF Sbjct: 13 IKEGDLTLIWVSRDNIKPVRMHSEEVFNTRYGSFPHKDIIGKPYGSQIAIRTKGSNKFAFVHVLQPTPELWTLSLPHRTQIVYTPDSSYIMQRLNCSPHSRVIEAGTGSGSFSHAFARSV---GHLFSFEFHHIRYEQALEEFKEHGLIDDNVTITHRDVCQGGF 174
BLAST of FC876816 vs. ExPASy Swiss-Prot
Match: TRM61_CANAL (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Candida albicans GN=TRM61 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.213e-25 Identity = 66/176 (37.50%), Postives = 94/176 (53.41%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHTTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVISFVTVGVRDIQCHGFPDEFTGLP-DSIFLDL 669 I+EGDLV+ Y +K + V + F R+G F+H IG +G + KG GF++LL PTPELWTL L H TQI+Y D S++I L + PG V AR V +G V+T++FHE R A+++ E + T+ RD+ GF + + D +FLDL Sbjct: 10 IEEGDLVLAYISRSTIKPINVKKGEIFNTRYGHFEHDKMIGMKYGEQMPGAKGYGFIHLLHPTPELWTLSLPHRTQIVYSPDSSYIIQRLNVKPGSRVIEAGTGSASFTHSFARTVTLSGKVFTYEFHEPRYLEAKKELEE-HKLDNTTITHRDVCNDGFSIDNESIEGDVVFLDL 184
BLAST of FC876816 vs. ExPASy Swiss-Prot
Match: TRM61_CRYNE (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Cryptococcus neoformans GN=TRM61 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.230e-24 Identity = 66/176 (37.50%), Postives = 101/176 (57.39%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG--GFVYLLAPTPELWTLVLSHTTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVISFVTVGVRDIQCHGFPDEFTGLPDSIFLDL 669 I+ GD+VI+Y D M A+ + F N++G + H IG+ +GS + S G+V++L PTPELWTL L H TQILY+ DIS++ M L + G V +R+V P+G V +F++H QR +A ++FE G+ + V + R++ GF D G+ + +FLDL Sbjct: 14 IEAGDIVILYMARDNMTAITITPGETFHNKYGRYPHDMLIGQKYGSKIHSPPPHPGYVHVLRPTPELWTLSLPHRTQILYLPDISYITMRLGVRVGGKVIEAGTGSGSMTHSLSRSVGPSGQVMSFEYHRQRFETALKEFESHGLTN-VRLQHRNVCKEGFGDA-QGV-EGVFLDL 186
BLAST of FC876816 vs. ExPASy Swiss-Prot
Match: TRM61_DEBHA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Debaryomyces hansenii GN=TRM61 PE=3 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 7.975e-24 Identity = 63/184 (34.24%), Postives = 96/184 (52.17%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHTTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVISFVTVGVRDIQCHGF-----PDEFTG----LPDSIFLDL 669 I+EGDLV+ + +K + V + S R+G F+H IG +G + KG GF++LL PTPELWT+ L H TQI+Y D S++I L + G V AR + G ++T++FHE R A+++ E G+++ + RD+ GF P++F D +FLDL Sbjct: 10 IEEGDLVLAFLGRSNIKPITVTKGSQLNTRYGNFEHDRMIGMKYGEQMPGAKGVGFIHLLYPTPELWTVSLPHRTQIVYTPDSSYIIQRLNVTSGTRVIEAGTGSGSFSHSFARTIGVEGRLFTYEFHEPRYIEAKKELEDHGLLANTVITHRDVCNDGFEISNIPEDFKKDDGICGDVVFLDL 193 The following BLAST results are available for this feature:
BLAST of FC876816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876816 ID=FC876816; Name=FC876816; organism=Citrus clementina; type=EST; length=671bpback to top |