FC876826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_HUMAN (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Homo sapiens GN=TRMT61A PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.057e-33 Identity = 73/166 (43.98%), Postives = 99/166 (59.64%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGVNIFVTVGVRDIQGQGF 624 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V +GG+VY+L PTPELWTL L HRTQILY +I+ + M L+L PG +V R + PTGH++T +FH Q A ARE+F+ V +VTV +D+ GF Sbjct: 4 VAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGF 169
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_RAT (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Rattus norvegicus GN=Trmt61a PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.183e-32 Identity = 72/166 (43.37%), Postives = 103/166 (62.05%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGVNIFVTVGVRDIQGQGF 624 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V ++GG+VY+L PTPELWT+ L HRTQILY +I+ + M L+L PG +V R++ PTGH++T +FH Q A ARE+F++ V+ +VTV +D+ GF Sbjct: 4 VAYEELIKEGDTAILSLGHGSMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCSRGGWVYVLHPTPELWTVNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRSIAPTGHLHTVEFHQQRADKAREEFQQHRVSQWVTVHTQDVCRSGF 169
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_MOUSE (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Mus musculus GN=Trmt61a PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.018e-32 Identity = 72/166 (43.37%), Postives = 102/166 (61.45%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGVNIFVTVGVRDIQGQGF 624 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V ++GG+VY+L PTPELWT+ L HRTQILY +I+ + M L+L PG +V R+V PTGH++T +FH Q A ARE+F+ ++ +VTV +D+ GF Sbjct: 4 VAYEELIKEGDTAILSLGHGSMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVICSRGGWVYVLHPTPELWTVNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRSVAPTGHLHTVEFHQQRADKAREEFQEHRLSQWVTVHTQDVCCSGF 169
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_BOVIN (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Bos taurus GN=TRMT61A PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.667e-32 Identity = 73/166 (43.98%), Postives = 99/166 (59.64%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGVNIFVTVGVRDIQGQGF 624 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V +GG+VY+L PTPELWTL L HRTQILY +I+ + M L+L PG +V R + PTGH++T +FH Q A ARE+F+ V +VTV +D+ GF Sbjct: 4 VAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALLTMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAERAREEFQEHRVGRWVTVLNQDVCRSGF 169
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_DICDI (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trmt61a OS=Dictyostelium discoideum GN=trmt61a PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.146e-27 Identity = 62/163 (38.04%), Postives = 100/163 (61.35%), Query Frame = 1 Query: 142 RCIKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGVNIFVTVGVRDIQG-QGF 624 + IKEGD V++Y D M + + N+ + ++FG+++H + IGK +GS + S+ G GF +++A TPELW++ L HRTQIL+ +IS +I L+L G AR + P GH++TF+FH++ AR+DF+ G++ ++TV RD G +GF Sbjct: 6 KIIKEGDRVVMYNGKDNMAVLTMESNNVYNSKFGSYRHKNIIGKEYGSKLSSDNGNGFCHVIAMTPELWSITLDHRTQILFNLDISTIIFNLELKNGSRAVESGTGSGSLSSSIARTIAPKGHLFTFEFHEERVKFARKDFKDNGLDQYITVTHRDACGKEGF 168
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_YEAST (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Saccharomyces cerevisiae GN=GCD14 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.505e-24 Identity = 64/165 (38.79%), Postives = 92/165 (55.76%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHSDWIGKPFGSMVF-----SNKGGFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTG-VNIFVTVGVRDIQGQGF 624 IKEGDL +++ D +K V++ F R+G+F H D IGKP+GS + SNK FV++L PTPELWTL L HRTQI+Y + S+++ L P V AR+V GH+++F+FH A E+F+ G ++ VT+ RD+ GF Sbjct: 13 IKEGDLTLIWVSRDNIKPVRMHSEEVFNTRYGSFPHKDIIGKPYGSQIAIRTKGSNKFAFVHVLQPTPELWTLSLPHRTQIVYTPDSSYIMQRLNCSPHSRVIEAGTGSGSFSHAFARSV---GHLFSFEFHHIRYEQALEEFKEHGLIDDNVTITHRDVCQGGF 174
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_KLULA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Kluyveromyces lactis GN=TRM61 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.004e-23 Identity = 60/166 (36.14%), Postives = 93/166 (56.02%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHSDWIGKPFGSMVF-----SNKGGFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGVNIF--VTVGVRDIQGQGF 624 IKEGDLV+ + D +K + V F R+GAF HSD IGKPFGS + SN+ GF+++L PTPELW++ L HRTQI+Y + S+++ ++ P V AR+ GH+++++FH+ A+++F+ G+ T+ RD+ GF Sbjct: 11 IKEGDLVLAWLSRDNLKPITVKAGEVFNTRYGAFSHSDMIGKPFGSQIAIRTKGSNRFGFIHVLQPTPELWSISLPHRTQIVYTPDSSYIMQRMECNPRSRVIEAGTGSGSFSHAFARS---AGHLFSYEFHEVRYEQAKQEFKEHGLLEAGNTTITHRDVCKDGF 173
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_CANAL (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Candida albicans GN=TRM61 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.311e-23 Identity = 60/160 (37.50%), Postives = 88/160 (55.00%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGVNIFVTVGVRDIQGQGF 624 I+EGDLV+ Y +K + V + F R+G F+H IG +G + KG GF++LL PTPELWTL L HRTQI+Y + S++I L + PG V AR VT +G V+T++FH+ A+++ E ++ T+ RD+ GF Sbjct: 10 IEEGDLVLAYISRSTIKPINVKKGEIFNTRYGHFEHDKMIGMKYGEQMPGAKGYGFIHLLHPTPELWTLSLPHRTQIVYSPDSSYIIQRLNVKPGSRVIEAGTGSASFTHSFARTVTLSGKVFTYEFHEPRYLEAKKELEEHKLD-NTTITHRDVCNDGF 168
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_CRYNE (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Cryptococcus neoformans GN=TRM61 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 8.497e-23 Identity = 60/163 (36.81%), Postives = 93/163 (57.06%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHSDWIGKPFGSMVFSNKG--GFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGVNIFVTVGVRDIQGQGFPD 630 I+ GD+VI+Y D M A+ + F N++G + H IG+ +GS + S G+V++L PTPELWTL L HRTQILY+ +IS++ M L + G V +R+V P+G V +F++H Q +A ++FE G+ V + R++ +GF D Sbjct: 14 IEAGDIVILYMARDNMTAITITPGETFHNKYGRYPHDMLIGQKYGSKIHSPPPHPGYVHVLRPTPELWTLSLPHRTQILYLPDISYITMRLGVRVGGKVIEAGTGSGSMTHSLSRSVGPSGQVMSFEYHRQRFETALKEFESHGLT-NVRLQHRNVCKEGFGD 175
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_DEBHA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Debaryomyces hansenii GN=TRM61 PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.227e-21 Identity = 56/169 (33.14%), Postives = 88/169 (52.07%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGVNIFVTVGVRDIQGQGF-----PDEF 636 I+EGDLV+ + +K + V + S R+G F+H IG +G + KG GF++LL PTPELWT+ L HRTQI+Y + S++I L + G V AR + G ++T++FH+ A+++ E G+ + RD+ GF P++F Sbjct: 10 IEEGDLVLAFLGRSNIKPITVTKGSQLNTRYGNFEHDRMIGMKYGEQMPGAKGVGFIHLLYPTPELWTVSLPHRTQIVYTPDSSYIIQRLNVTSGTRVIEAGTGSGSFSHSFARTIGVEGRLFTYEFHEPRYIEAKKELEDHGLLANTVITHRDVCNDGFEISNIPEDF 178 The following BLAST results are available for this feature:
BLAST of FC876826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876826 ID=FC876826; Name=FC876826; organism=Citrus clementina; type=EST; length=657bpback to top |