FC876826

Overview
NameFC876826
Unique NameFC876826
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length657
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_HUMAN (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Homo sapiens GN=TRMT61A PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.057e-33
Identity = 73/166 (43.98%), Postives = 99/166 (59.64%), Query Frame = 1
Query:  130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGVNIFVTVGVRDIQGQGF 624
            +++   IKEGD  I+   H  M AV+V + +  Q R G  +HS D IG+PFGS V   +GG+VY+L PTPELWTL L HRTQILY  +I+ + M L+L PG +V               R + PTGH++T +FH Q A  ARE+F+   V  +VTV  +D+   GF
Sbjct:    4 VAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGF 169          
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_RAT (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Rattus norvegicus GN=Trmt61a PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.183e-32
Identity = 72/166 (43.37%), Postives = 103/166 (62.05%), Query Frame = 1
Query:  130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGVNIFVTVGVRDIQGQGF 624
            +++   IKEGD  I+   H  M AV+V + +  Q R G  +HS D IG+PFGS V  ++GG+VY+L PTPELWT+ L HRTQILY  +I+ + M L+L PG +V               R++ PTGH++T +FH Q A  ARE+F++  V+ +VTV  +D+   GF
Sbjct:    4 VAYEELIKEGDTAILSLGHGSMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCSRGGWVYVLHPTPELWTVNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRSIAPTGHLHTVEFHQQRADKAREEFQQHRVSQWVTVHTQDVCRSGF 169          
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_MOUSE (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Mus musculus GN=Trmt61a PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.018e-32
Identity = 72/166 (43.37%), Postives = 102/166 (61.45%), Query Frame = 1
Query:  130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGVNIFVTVGVRDIQGQGF 624
            +++   IKEGD  I+   H  M AV+V + +  Q R G  +HS D IG+PFGS V  ++GG+VY+L PTPELWT+ L HRTQILY  +I+ + M L+L PG +V               R+V PTGH++T +FH Q A  ARE+F+   ++ +VTV  +D+   GF
Sbjct:    4 VAYEELIKEGDTAILSLGHGSMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVICSRGGWVYVLHPTPELWTVNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRSVAPTGHLHTVEFHQQRADKAREEFQEHRLSQWVTVHTQDVCCSGF 169          
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_BOVIN (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Bos taurus GN=TRMT61A PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.667e-32
Identity = 73/166 (43.98%), Postives = 99/166 (59.64%), Query Frame = 1
Query:  130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGVNIFVTVGVRDIQGQGF 624
            +++   IKEGD  I+   H  M AV+V + +  Q R G  +HS D IG+PFGS V   +GG+VY+L PTPELWTL L HRTQILY  +I+ + M L+L PG +V               R + PTGH++T +FH Q A  ARE+F+   V  +VTV  +D+   GF
Sbjct:    4 VAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALLTMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAERAREEFQEHRVGRWVTVLNQDVCRSGF 169          
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_DICDI (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trmt61a OS=Dictyostelium discoideum GN=trmt61a PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.146e-27
Identity = 62/163 (38.04%), Postives = 100/163 (61.35%), Query Frame = 1
Query:  142 RCIKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGVNIFVTVGVRDIQG-QGF 624
            + IKEGD V++Y   D M  + +  N+ + ++FG+++H + IGK +GS + S+ G GF +++A TPELW++ L HRTQIL+  +IS +I  L+L  G                 AR + P GH++TF+FH++    AR+DF+  G++ ++TV  RD  G +GF
Sbjct:    6 KIIKEGDRVVMYNGKDNMAVLTMESNNVYNSKFGSYRHKNIIGKEYGSKLSSDNGNGFCHVIAMTPELWSITLDHRTQILFNLDISTIIFNLELKNGSRAVESGTGSGSLSSSIARTIAPKGHLFTFEFHEERVKFARKDFKDNGLDQYITVTHRDACGKEGF 168          
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_YEAST (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Saccharomyces cerevisiae GN=GCD14 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.505e-24
Identity = 64/165 (38.79%), Postives = 92/165 (55.76%), Query Frame = 1
Query:  148 IKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHSDWIGKPFGSMVF-----SNKGGFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTG-VNIFVTVGVRDIQGQGF 624
            IKEGDL +++   D +K V++     F  R+G+F H D IGKP+GS +      SNK  FV++L PTPELWTL L HRTQI+Y  + S+++  L   P   V              AR+V   GH+++F+FH      A E+F+  G ++  VT+  RD+   GF
Sbjct:   13 IKEGDLTLIWVSRDNIKPVRMHSEEVFNTRYGSFPHKDIIGKPYGSQIAIRTKGSNKFAFVHVLQPTPELWTLSLPHRTQIVYTPDSSYIMQRLNCSPHSRVIEAGTGSGSFSHAFARSV---GHLFSFEFHHIRYEQALEEFKEHGLIDDNVTITHRDVCQGGF 174          
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_KLULA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Kluyveromyces lactis GN=TRM61 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.004e-23
Identity = 60/166 (36.14%), Postives = 93/166 (56.02%), Query Frame = 1
Query:  148 IKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHSDWIGKPFGSMVF-----SNKGGFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGVNIF--VTVGVRDIQGQGF 624
            IKEGDLV+ +   D +K + V     F  R+GAF HSD IGKPFGS +      SN+ GF+++L PTPELW++ L HRTQI+Y  + S+++  ++  P   V              AR+    GH+++++FH+     A+++F+  G+      T+  RD+   GF
Sbjct:   11 IKEGDLVLAWLSRDNLKPITVKAGEVFNTRYGAFSHSDMIGKPFGSQIAIRTKGSNRFGFIHVLQPTPELWSISLPHRTQIVYTPDSSYIMQRMECNPRSRVIEAGTGSGSFSHAFARS---AGHLFSYEFHEVRYEQAKQEFKEHGLLEAGNTTITHRDVCKDGF 173          
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_CANAL (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Candida albicans GN=TRM61 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.311e-23
Identity = 60/160 (37.50%), Postives = 88/160 (55.00%), Query Frame = 1
Query:  148 IKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGVNIFVTVGVRDIQGQGF 624
            I+EGDLV+ Y     +K + V +   F  R+G F+H   IG  +G  +   KG GF++LL PTPELWTL L HRTQI+Y  + S++I  L + PG  V              AR VT +G V+T++FH+     A+++ E   ++   T+  RD+   GF
Sbjct:   10 IEEGDLVLAYISRSTIKPINVKKGEIFNTRYGHFEHDKMIGMKYGEQMPGAKGYGFIHLLHPTPELWTLSLPHRTQIVYSPDSSYIIQRLNVKPGSRVIEAGTGSASFTHSFARTVTLSGKVFTYEFHEPRYLEAKKELEEHKLD-NTTITHRDVCNDGF 168          
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_CRYNE (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Cryptococcus neoformans GN=TRM61 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.497e-23
Identity = 60/163 (36.81%), Postives = 93/163 (57.06%), Query Frame = 1
Query:  148 IKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHSDWIGKPFGSMVFSNKG--GFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGVNIFVTVGVRDIQGQGFPD 630
            I+ GD+VI+Y   D M A+ +     F N++G + H   IG+ +GS + S     G+V++L PTPELWTL L HRTQILY+ +IS++ M L +  G  V              +R+V P+G V +F++H Q   +A ++FE  G+   V +  R++  +GF D
Sbjct:   14 IEAGDIVILYMARDNMTAITITPGETFHNKYGRYPHDMLIGQKYGSKIHSPPPHPGYVHVLRPTPELWTLSLPHRTQILYLPDISYITMRLGVRVGGKVIEAGTGSGSMTHSLSRSVGPSGQVMSFEYHRQRFETALKEFESHGLT-NVRLQHRNVCKEGFGD 175          
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_DEBHA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Debaryomyces hansenii GN=TRM61 PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.227e-21
Identity = 56/169 (33.14%), Postives = 88/169 (52.07%), Query Frame = 1
Query:  148 IKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGVNIFVTVGVRDIQGQGF-----PDEF 636
            I+EGDLV+ +     +K + V + S    R+G F+H   IG  +G  +   KG GF++LL PTPELWT+ L HRTQI+Y  + S++I  L +  G  V              AR +   G ++T++FH+     A+++ E  G+     +  RD+   GF     P++F
Sbjct:   10 IEEGDLVLAFLGRSNIKPITVTKGSQLNTRYGNFEHDRMIGMKYGEQMPGAKGVGFIHLLYPTPELWTVSLPHRTQIVYTPDSSYIIQRLNVTSGTRVIEAGTGSGSFSHSFARTIGVEGRLFTYEFHEPRYIEAKKELEDHGLLANTVITHRDVCNDGFEISNIPEDF 178          
The following BLAST results are available for this feature:
BLAST of FC876826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
TRM61_HUMAN9.057e-3343.98tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_RAT1.183e-3243.37tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_MOUSE2.018e-3243.37tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_BOVIN7.667e-3243.98tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_DICDI1.146e-2738.04tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_YEAST4.505e-2438.79tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_KLULA1.004e-2336.14tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_CANAL1.311e-2337.50tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_CRYNE8.497e-2336.81tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_DEBHA1.227e-2133.14tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CD04RM1 EHR Citrus clementina cDNA clone KN0AAN1CD04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876826 ID=FC876826; Name=FC876826; organism=Citrus clementina; type=EST; length=657bp
TTCTCTCTGCCTCTCAGATTTTGCTGTCTGACTTCCTGAACCCGTCACAA
TTTTATTTGCAGATAATTGCTTGGTTTTAGTAACTCTTTGATAATTTAAA
GGATGTTGCCAACTGATCCAACGAAAAAGATATCCTTTACTCGATGCATT
AAAGAAGGGGACTTGGTTATTGTCTATGAGAGGCATGACTGCATGAAAGC
TGTTAAAGTATGCCAGAACTCACCTTTCCAGAACCGTTTTGGTGCGTTTA
AACATTCAGACTGGATTGGGAAGCCCTTTGGGTCTATGGTGTTCAGTAAC
AAGGGCGGATTTGTTTACTTGTTAGCCCCAACTCCGGAGTTATGGACTCT
GGTTTTGAGCCATAGAACTCAAATACTTTACATTGCAAATATTAGCTTTG
TCATCATGTACTTACAACTTGTTCCTGGTTGTTTGGTTCTGCAGTCAGGG
ACTGGAAGTGGATCTTTGACAACCTCTCTTGCAAGGGCTGTAACTCCTAC
AGGACATGTCTATACTTTTGATTTTCATGATCAAACGGCTGCCTCAGCTA
GGGAAGACTTTGAGAGGACAGGAGTGAACATTTTTGTTACTGTGGGTGTT
AGAGATATCCAGGGTCAGGGATTTCCTGATGAATTTACTGGGTTAGCTGA
TTCTATA
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