FC876852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876852 vs. ExPASy Swiss-Prot
Match: ZIP2_ARATH (Zinc transporter 2 OS=Arabidopsis thaliana GN=ZIP2 PE=2 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 7.331e-103 Identity = 181/280 (64.64%), Postives = 217/280 (77.50%), Query Frame = 3 Query: 15 STFAGGVSPYFYRWNESFLLLGTQFAGGVFLGTSMMHFLSDSNETFKDLTSKSYPFAFMLASAGYLLTMFGDCIINFVIKQG-----------SKKETRVDVEEEKSEEV--GTDGNPVFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLSGVGVIAVVMIWD 815 STF GVSPYFYRWNESFLLLGTQF+GG+FL T+++HFLSD+NETF+ L K YP+AFMLA+AGY LTM D + FV S+++ V V+EE E+ G D + RTS GDT LLI ALCFHS+FEGIAIG+S TK +AWRNLWTISLHK+FAA+AMGIALL++IPKRPF LT YSFAF ISSPIGVGIGI I+AT+QG DW YAISMGLACGVF+YVA+NHLI+KG+KP+ +CYFD P +KF+AV GV +++VVMIWD Sbjct: 74 STFLAGVSPYFYRWNESFLLLGTQFSGGIFLATALIHFLSDANETFRGLKHKEYPYAFMLAAAGYCLTMLADVAVAFVAAGSNNNHVGASVGESREDDDVAVKEEGRREIKSGVDVSQALIRTSGFGDTALLIFALCFHSIFEGIAIGLSDTKSDAWRNLWTISLHKVFAAVAMGIALLKLIPKRPFFLTVVYSFAFGISSPIGVGIGIGINATSQGAGGDWTYAISMGLACGVFVYVAVNHLISKGYKPREECYFDKPIYKFIAVFLGVALLSVVMIWD 353
BLAST of FC876852 vs. ExPASy Swiss-Prot
Match: ZIP11_ARATH (Zinc transporter 11 OS=Arabidopsis thaliana GN=ZIP11 PE=2 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 5.822e-92 Identity = 169/276 (61.23%), Postives = 211/276 (76.45%), Query Frame = 3 Query: 12 VSTFAGGVSPYFYRWNESFLLLGTQFAGGVFLGTSMMHFLSDSNETFKDLT--------SKSYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEEEKSEEVGTDGNPVFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLSGVGVIAVVMIWD 815 V TF GVSPYF +W++ FL+LGTQFAGGVFL T++MHFLSD++ETF+ L S +YPFA+MLA AG++LTM D +I + + ++ + + E++ ++ T +SIGD+ILLI+ALCFHSVFEGIAIG+S TK +AWR LWTI+LHKIFAAIAMGIALLRMIP RP + YSFAFAISSPIGV IGI IDATTQG IADWI+A+SM LACGVF+YV++NHL+AKG++P K + D P +KFLAVL GV VIA+VMIWD Sbjct: 58 VLTFISGVSPYFLKWSQGFLVLGTQFAGGVFLATALMHFLSDADETFRGLLTAEGESEPSPAYPFAYMLACAGFMLTMLADSVIAHIYSK-TQNDLELQGEDKSNQRSATT-------ETSIGDSILLIVALCFHSVFEGIAIGISETKSDAWRALWTITLHKIFAAIAMGIALLRMIPDRPLFSSITYSFAFAISSPIGVAIGIVIDATTQGSIADWIFALSMSLACGVFVYVSVNHLLAKGYRPNKKVHVDEPRYKFLAVLFGVVVIAIVMIWD 325
BLAST of FC876852 vs. ExPASy Swiss-Prot
Match: S39A1_DANRE (Zinc transporter ZIP1 OS=Danio rerio GN=slc39a1 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.376e-15 Identity = 66/257 (25.68%), Postives = 107/257 (41.63%), Query Frame = 3 Query: 87 FAGGVFLGTSMMHFLSD-----SNETFKDLTSKSYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEEEKSEEVGTDGNP-------------VFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLSGVGVIAVV 803 FAGGVFL ++ + D E K +P + + G+ + + ++ +G + E + + G+P V F S + +L L+L HSVFEG+AIG+ T + I +HK ++ + L++ K L Y FAI SP+G+GIGI + T+ I A+ GLA G FIY+ ++ P + P K L +L G ++A + Sbjct: 51 FAGGVFLSACLLDIIPDYLSDIHGELQKRDLDDGFPLPEFIMACGFFTVLILEKMV-LSCTEGHRNEETAPLLAPAAPNGHAHGHPSVNDLEGSGHHVHVDFHAHSSFRSFMLFLSLSLHSVFEGLAIGLQTTNAKVLEICIAILVHKSIIVFSLSVKLVQSAVKP--LWVVLYVTVFAIMSPLGIGIGIVV-IETERQAGGLIQAVLEGLAAGTFIYITFLEIL-----PHELNSSERPLLKVLFLLCGFSIMAAL 298
BLAST of FC876852 vs. ExPASy Swiss-Prot
Match: S39A1_TAKRU (Zinc transporter ZIP1 OS=Takifugu rubripes GN=slc39a1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.858e-14 Identity = 73/265 (27.55%), Postives = 115/265 (43.40%), Query Frame = 3 Query: 57 NESFLLLGTQFAGGVFLGTSMMH----FLSDSN-ETFKDLTSKSYPFAFMLASAGYLLTMFGDCII-NFVIKQGSKKETRVDVEEEKSEEVGTDGNP-----------VFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAKGFKPQNKCYFDAPF----FKFLAVLSGVG 788 + + L L + FAGGVFL + +LSD N E S+P + +AG+ + + I+ N + + +E + E KS G+ V F+ S + +L L+L HS+FEG+AIG+ T + I +HK ++ + L++ P L AAY FA+ SP+G+ IGI++ Q I AI G A G F+Y+ ++ K F F +A LS +G Sbjct: 41 HRTVLSLISCFAGGVFLSACFLDIIPDYLSDINTELHARQLETSFPLPEFIMAAGFFTVLILERIVLNCKEMRATHEERTTLIPERKSGHGHGHGDGPDPESSGHHVHVDFQAHSPFRSFMLFLSLSLHSIFEGLAIGLQTTDPKVVEICIAILVHKSIIVFSLAVKLVQ--SAIPPLWVAAYIGVFALMSPVGIAIGISV-MEAQLAAGPLIQAILEGFAAGTFVYITFLEILPHELNSPGKQLLKVLFLLLGFSIMAALSFLG 302
BLAST of FC876852 vs. ExPASy Swiss-Prot
Match: ZNTD_DICDI (Protein zntD OS=Dictyostelium discoideum GN=zntD PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.366e-14 Identity = 55/162 (33.95%), Postives = 86/162 (53.09%), Query Frame = 3 Query: 330 VFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRP-FLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLSGVGVIAVVMIW 812 V + S+I +L++AL HS+FEG+A+GV +++ + L I HKI A+ A+GI+ + ++P FL F F+++SPIG +G+ I G + I G+A G F+YVA+ +I K + D FL +L G +AVV IW Sbjct: 527 VVTKKSNILLPFILVIALSIHSLFEGLAMGVQSSEIRVFDILIAIFAHKILASFALGISTITSSNEKPSFLKLFLLVFVFSLTSPIGSILGMVI--VGSGVTGSMVPPILQGIASGTFLYVAVVEIIPKELSHDSN---DILIKSFLLLL-GFSGMAVVAIW 682
BLAST of FC876852 vs. ExPASy Swiss-Prot
Match: S39A2_HUMAN (Zinc transporter ZIP2 OS=Homo sapiens GN=SLC39A2 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.039e-13 Identity = 67/302 (22.19%), Postives = 121/302 (40.07%), Query Frame = 3 Query: 9 LVSTFAGGVSPYFYRW----------NESFLLLGTQFAGGVFLGTSMMHFLSDSNETFKDLTSK----------------------SYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEEEKSEEVGTDGNPVFFRTSSIGD--TILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLSGVGVIAVVMIW 812 L T G++P ++W LLG + GVFLG MH +++ E + K YP+ ++ S G+ L F + + G+ + V EE + + + S G ++L+L+L FHSVFEG+A+G+ T + + HK +G+ L+ + + + + A+ SP+G+ +G+A+ A+ G+A G F+YV ++ P+ +AP K+ V +G +A + +W Sbjct: 16 LALTLGCGLTPICFKWFQIDAARGHHRRVLRLLGC-ISAGVFLGAGFMHMTAEALEEIESQIQKFMVQNRSASERNSSGDADSAHMEYPYGELIISLGFFLVFFLESLA-LQCCPGAAGGSTVQDEEWGGAHIFELHSHGHLPSPSKGPLRALVLLLSLSFHSVFEGLAVGLQPTVAATVQLCLAVLAHKGLVVFGVGMRLVHLGTSSRWAVFSI--LLLALMSPLGLAVGLAVTGGDSEGGRGLAQAVLEGVAAGTFLYVTFLEIL-----PRELASPEAPLAKWSCVAAGFAFMAFIALW 308
BLAST of FC876852 vs. ExPASy Swiss-Prot
Match: IRT2_ARATH (Fe(2+) transport protein 2 OS=Arabidopsis thaliana GN=IRT2 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.568e-12 Identity = 83/311 (26.69%), Postives = 138/311 (44.37%), Query Frame = 3 Query: 9 LVSTFAGGVSPYFYRWNESFL-------LLGTQFAGGVFLGTSMMHFLSDSNETFKDLTSK--------SYPFAFMLASAGYLLTMFGDCIINFVI----KQGSKKETRVDVEEEKS-EEVG---TDGNPVFFRTSSIGD-------TILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLR--MIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLAC--GVFIYVAINHLIAKGF---------KPQNKCYFDAPFFKFLAVLSGVGVIAVVMIW 812 L ++ G SP F R+ SFL ++ F+ G+ LGT MH L DS F+ L+SK +PFA +A L+T+ D I + G + +++EK+ VG + G+ V T G ++L + + FHSV G+++G + + + H +F I +G +L+ + FL+ +F F ++P G+ +GIA+ + + + + I + AC G+ IY+A+ L+A F K Q KC F A L G V++VV +W Sbjct: 55 LTTSLIGVTSPLFSRYI-SFLRPDGNGFMIVKCFSSGIILGTGFMHVLPDS---FEMLSSKCLSDNPWHKFPFAGFVAMMSGLVTLAIDSITTSLYTGKNSVGPVPDEEYGIDQEKAIHMVGHNHSHGHGVVLATKDDGQLLRYQVIAMVLEVGILFHSVVIGLSLGATNDSCTIKGLIIALCFHHLFEGIGLGGCILQADFTNVKKFLM----AFFFTGTTPCGIFLGIALSSIYRDNSPTALITIGLLNACSAGMLIYMALVDLLATEFMGSMLQGSIKLQIKC--------FTAALLGCAVMSVVAVW 349
BLAST of FC876852 vs. ExPASy Swiss-Prot
Match: S39A1_BOVIN (Zinc transporter ZIP1 OS=Bos taurus GN=SLC39A1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.493e-12 Identity = 65/274 (23.72%), Postives = 121/274 (44.16%), Query Frame = 3 Query: 30 GVSPYFYRWNESFLLLGTQFAGGVFLGTSMMHFLSDS----NETFKDL-TSKSYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEEEKSEEVGT-DGNPVFFR----------TSSIGDTI---LLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLSGVGVI 794 G +P + L L + FAGGVFL T ++ L D +E L + +P + + G+ L + + I K+++ EE +GT +G P + SS + +L+ +L HSVFEG+A+G+ + A + LHK A+++ + LL+ + + A F+ +P+G+G+G A+ A + G + ++ G+A G F+Y+ ++ PQ + K + +L+G ++ Sbjct: 56 GANPEASASRQKALSLVSCFAGGVFLATCLLDLLPDYLGAIDEALAALHVTLQFPLQEFILAMGFFLVLVME-----QITLAYKEQSGPPPREETRALLGTVNGGPQHWHDGLGVPQAGGASSAPSALRACVLVFSLALHSVFEGLAVGLQRDQARAMELCLALLLHKGILAVSLSLRLLQSHLRAQ--VVAGCGILFSCMTPLGIGLGTAL-AESAGPLHQLAQSVLEGMAAGTFLYITFLEIL-----PQELATSEQRILKVILLLAGFALL 316
BLAST of FC876852 vs. ExPASy Swiss-Prot
Match: S39A1_HUMAN (Zinc transporter ZIP1 OS=Homo sapiens GN=SLC39A1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.562e-12 Identity = 61/261 (23.37%), Postives = 114/261 (43.68%), Query Frame = 3 Query: 69 LLLGTQFAGGVFLGTSMMHFLSDSNETFKDLTSK-----SYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEEEKSEEVGT-DGNPVFFR-------------TSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLSGVGVI 794 L L + FAGGVFL T ++ L D + + +P + + G+ L + + I K+++ EE +GT +G P + T S +L+ +L HSVFEG+A+G+ + A + LHK A+++ + LL+ + + A F+ +P+G+G+G A+ A + G + ++ G+A G F+Y+ ++ PQ + K + +L+G ++ Sbjct: 69 LSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVTLQFPLQEFILAMGFFLVLVME-----QITLAYKEQSGPSPLEETRALLGTVNGGPQHWHDGPGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGILAVSLSLRLLQSHLRAQ--VVAGCGILFSCMTPLGIGLGAAL-AESAGPLHQLAQSVLEGMAAGTFLYITFLEIL-----PQELASSEQRILKVILLLAGFALL 316
BLAST of FC876852 vs. ExPASy Swiss-Prot
Match: S39A1_MOUSE (Zinc transporter ZIP1 OS=Mus musculus GN=Slc39a1 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 7.782e-12 Identity = 64/261 (24.52%), Postives = 116/261 (44.44%), Query Frame = 3 Query: 69 LLLGTQFAGGVFLGTSMMHFLSDS----NETFKDL-TSKSYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEEEKSEEVGT-DGNPVFFRTS----SIGDT---------ILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLSGVGVI 794 L L + FAGGVFL T ++ L D +E + L + +P + + G+ L + + I +Q S EE +GT +G P + G T +L+ +L HSVFEG+A+G+ + A + LHK A+++ + LL+ + + A F+ +P+G+G+G A+ A + G + ++ G+A G F+Y+ ++ PQ + K + +L+G ++ Sbjct: 69 LSLVSCFAGGVFLATCLLDLLPDYLAAIDEALEALHVTLQFPLQEFILAMGFFLVLVMEQITLAYKEQSSPPHP-----EETRALLGTVNGGPQHWHDGPGIPQAGGTPAAPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGILAVSLSLRLLQSHLR--VQVVAGCGILFSCMTPLGIGLGAAL-AESAGPLHQLAQSVLEGMAAGTFLYITFLEIL-----PQELATSEQRILKVILLLAGFALL 316 The following BLAST results are available for this feature:
BLAST of FC876852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876852 ID=FC876852; Name=FC876852; organism=Citrus clementina; type=EST; length=831bpback to top |