FC876877

Overview
NameFC876877
Unique NameFC876877
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.703e-55
Identity = 103/149 (69.13%), Postives = 123/149 (82.55%), Query Frame = 2
Query:    2 LYVDHTLILTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRYQQHQEAYDEHDE--PAMPRVQCAQQ 442
            L+ +H+L LTEALCGFQF LTHLD RQLLIKSNPGE+IKP Q+K IN+EGMP +QRPFM+G+LYI F+V+FP+   L+PDQC+ LESVLP R    L+DME+D+CEE TMHDVNI+EEMRRK++QQ QEAYDE DE      RVQCAQQ
Sbjct:  272 LFYEHSLSLTEALCGFQFVLTHLDNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDS--LTPDQCKALESVLPSRNASRLTDMEIDECEETTMHDVNIEEEMRRKQHQQAQEAYDEDDEGHGGAQRVQCAQQ 418          
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.659e-54
Identity = 103/149 (69.13%), Postives = 122/149 (81.88%), Query Frame = 2
Query:    2 LYVDHTLILTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRYQQHQEAYDEHDE--PAMPRVQCAQQ 442
            L+  HTL LTEALCGFQF LTHLDGRQLLIKSNPGE++KP Q+KAIN+EGMP +QRPFM+G+LYIQF V+FP+   L+PDQC+ +ESVLP      L+DME+D+CEE TMHDVNI+EEMRRK++Q  QEAYDE DE      RVQCAQQ
Sbjct:  251 LFYKHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDS--LTPDQCKVIESVLPRSASSQLTDMEIDECEETTMHDVNIEEEMRRKQHQHAQEAYDEDDEGHGGGQRVQCAQQ 397          
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.971e-53
Identity = 99/148 (66.89%), Postives = 124/148 (83.78%), Query Frame = 2
Query:    2 LYVDHTLILTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRYQQHQEAYDEHDEPA-MPRVQCAQQ 442
            L+ +HTL LTEALCGF+F LTHLDGRQLLIKSN GE++KP Q+KAI +EGMP +QRPFMKG++YI F VEFP+   L+PDQ ++LE++LPP+P  +L+ MELD+CEE T+H+VNI+EEM+RK+ Q  QEAYDE DEPA   RVQCAQQ
Sbjct:  272 LFYEHTLSLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDS--LNPDQVKSLEAILPPKPSMSLTYMELDECEETTLHNVNIEEEMKRKQTQAQQEAYDEDDEPAGGQRVQCAQQ 417          
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.028e-52
Identity = 102/149 (68.46%), Postives = 121/149 (81.21%), Query Frame = 2
Query:    2 LYVDHTLILTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRYQQHQEAYDEHDE--PAMPRVQCAQQ 442
            L+V+HTL L E+LCGFQF LTHLDGRQLLIKS PGE++KP Q+KAIN+EGMP +QRPFMKG+LYI F+VEFP+   L+P+QC+ LE VLPPR    LSDMELD+CEE T+HDVNI+EEMRRK   Q QEAYDE ++      RVQCAQQ
Sbjct:  270 LFVEHTLSLVESLCGFQFILTHLDGRQLLIKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDS--LNPEQCKALEGVLPPRTSVQLSDMELDECEETTLHDVNIEEEMRRK---QAQEAYDEDEDMHGGAQRVQCAQQ 413          
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 2.480e-50
Identity = 100/152 (65.79%), Postives = 118/152 (77.63%), Query Frame = 2
Query:    2 LYVDHTLILTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRYQQHQEAYDEHDEP-----AMPRVQCAQQ 442
            L+V+HTL LTEALCGFQF LTHLDGR LLIKSNPGE++KP  YKAI++EGMP +QRPFMKG+LYI F VEFP+   LSPDQ + LE+VLP      LSDME+D+CEE T+HDVNI++EMRRK  Q  +EAYD+ DE         RVQCAQQ
Sbjct:  272 LFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDS--LSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDVNIEDEMRRKA-QAQREAYDDDDEDDDHPGGAQRVQCAQQ 420          
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.361e-48
Identity = 96/150 (64.00%), Postives = 117/150 (78.00%), Query Frame = 2
Query:    2 LYVDHTLILTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRYQQHQEAYDEHDEP---AMPRVQCAQQ 442
            L+V+HT+ LTEALCGFQF LTHLD RQLLIKS PGE++KP  YKAI++EGMP +QRPFMKG+LYI F VEFPE   LSPDQ + +E+VLP      +SDME+DDCEE T+HDVNI++EM+RK  Q  +EAYD+ +E       RVQCAQQ
Sbjct:  273 LFVEHTISLTEALCGFQFVLTHLDKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPES--LSPDQTKAIEAVLPKPTKAAISDMEIDDCEETTLHDVNIEDEMKRKA-QAQREAYDDDEEDHPGGAQRVQCAQQ 419          
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.761e-25
Identity = 65/153 (42.48%), Postives = 93/153 (60.78%), Query Frame = 2
Query:    2 LYVDHTLILTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPG-KNLSDMELDDCEEVTMHDVNIDEEMRRKRYQQHQEAY-DEHDEPAM----PRVQCAQQ 442
            L++ + + L EALCGFQF   HLDGRQ+++K  PG++I+PG  + +  EGMP ++ PF KG LYI+F+V+FPE   ++PD+   LE +LP RP   N+    + D EEV + +    +  R     Q +EAY D  DE +     P VQCA Q
Sbjct:  267 LHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNI----IGDTEEVELQEF---DSTRGSGGGQRREAYNDSSDEESSSHHGPGVQCAHQ 412          
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.032e-25
Identity = 64/153 (41.83%), Postives = 93/153 (60.78%), Query Frame = 2
Query:    2 LYVDHTLILTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPG-KNLSDMELDDCEEVTMHDVNIDEEMRRKRYQQHQEAY-DEHDEPAM----PRVQCAQQ 442
            L++ + + L EALCGFQF   HLDGRQ+++K  PG++I+PG  + +  EGMP ++ PF KG LYI+F+V+FPE   ++PD+   LE +LP RP   N+    + + EEV + +    +  R     Q +EAY D  DE +     P VQCA Q
Sbjct:  267 LHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNI----IGETEEVELQEF---DSTRGSGGGQRREAYNDSSDEESSSHHGPGVQCAHQ 412          
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.206e-24
Identity = 62/152 (40.79%), Postives = 90/152 (59.21%), Query Frame = 2
Query:    2 LYVDHTLILTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRYQQHQEAY-DEHDEPAM----PRVQCAQQ 442
            L++ + + L EALCGFQF   HLD RQ+++K  PG++I+PG  + +  EGMP ++ PF KG LYI+F+V+FPE   ++PD+   LE +LP RP        + + EEV + +    +  R     Q +EAY D  DE +     P VQCA Q
Sbjct:  267 LHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPE---VPNVIGETEEVELQEF---DSTRGSGGGQRREAYNDSSDEESSSHHGPGVQCAHQ 412          
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.206e-24
Identity = 62/152 (40.79%), Postives = 90/152 (59.21%), Query Frame = 2
Query:    2 LYVDHTLILTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRYQQHQEAY-DEHDEPAM----PRVQCAQQ 442
            L++ + + L EALCGFQF   HLD RQ+++K  PG++I+PG  + +  EGMP ++ PF KG LYI+F+V+FPE   ++PD+   LE +LP RP        + + EEV + +    +  R     Q +EAY D  DE +     P VQCA Q
Sbjct:  267 LHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPE---VPNVIGETEEVELQEF---DSTRGSGGGQRREAYNDSSDEESSSHHGPGVQCAHQ 412          
The following BLAST results are available for this feature:
BLAST of FC876877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
DNJH2_ALLPO5.703e-5569.13DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNJH1_ALLPO1.659e-5469.13DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNJH_ATRNU6.971e-5366.89DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNJH_CUCSA2.028e-5268.46DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNAJ3_ARATH2.480e-5065.79Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNAJ2_ARATH1.361e-4864.00Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJA2_BOVIN2.761e-2542.48DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNJA2_HUMAN8.032e-2541.83DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_RAT5.206e-2440.79DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJA2_MOUSE5.206e-2440.79DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CG12RM1 EHR Citrus clementina cDNA clone KN0AAN1CG12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876877 ID=FC876877; Name=FC876877; organism=Citrus clementina; type=EST; length=713bp
TCTTTATGTTGATCACACCCTCATTTTGACTGAAGCTCTGTGTGGGTTTC
AATTTGCCTTAACCCATCTTGATGGGAGGCAGCTACTGATCAAATCAAAT
CCTGGGGAGATCATTAAGCCTGGTCAATACAAAGCAATCAACAATGAGGG
AATGCCGCATCACCAAAGGCCCTTTATGAAAGGCAGGCTTTACATTCAAT
TCAATGTAGAATTTCCGGAATGTGGAATCCTTTCTCCTGATCAGTGCCGG
ACTTTAGAGAGTGTACTACCTCCGAGGCCAGGCAAGAACCTGTCTGACAT
GGAGCTGGATGATTGTGAGGAGGTCACCATGCATGATGTTAACATTGATG
AAGAGATGAGGCGTAAACGGTATCAACAGCATCAAGAGGCATATGATGAA
CATGATGAACCAGCAATGCCAAGAGTCCAGTGTGCTCAGCAATGAGGCAA
ATTCAATTTTGCCTTTCCTGGTCCCCTTGCCTATCAGAGGCAATGAGCAT
TTTCAATTTGGCATCTAGTATGTTTTTTTTACCGCTGCATGATTTTTGTG
CTAATTAATATTATAAGCAAGCAGTAGCAGTTATTTACCAGGCAGAAGGT
GGATAGTATTTATATACACACACATATGCATATGTATATGCAGCAGCGGA
TCAGATGCTTATGTCATTTAAATTGGATTTTTTGATGTATTGCATAAATT
CAGATGCTTGTTG
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